Protein–RNA interactions for Protein: Q02793

SKI8, Antiviral protein SKI8, yeastyeast

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKI8Q02793 NSR1YGR159C 1245 nt19.22■□□□□ 0.67
SKI8Q02793 YML009W-BYML009W-B 477 nt18.83■□□□□ 0.6
SKI8Q02793 NOP1YDL014W 984 nt18.25■□□□□ 0.51
SKI8Q02793 MDJ1YFL016C 1536 nt17.58■□□□□ 0.41
SKI8Q02793 YKL036CYKL036C 393 nt16.95■□□□□ 0.3
SKI8Q02793 YJL027CYJL027C 417 nt16.13■□□□□ 0.17
SKI8Q02793 Q0297Q0297 156 nt16.02■□□□□ 0.16
SKI8Q02793 SRX1YKL086W 384 nt15.95■□□□□ 0.14
SKI8Q02793 SCS3YGL126W 1143 nt15.47■□□□□ 0.07
SKI8Q02793 DBP2YNL112W 1641 nt15.4■□□□□ 0.06
SKI8Q02793 YCR051WYCR051W 669 nt15.14■□□□□ 0.01
SKI8Q02793 YBR190WYBR190W 312 nt15.13■□□□□ 0.01
SKI8Q02793 RTC3YHR087W 336 nt14.7□□□□□ -0.06
SKI8Q02793 YOL085CYOL085C 342 nt14.68□□□□□ -0.06
SKI8Q02793 TRN1tP(UGG)A 72 nt14.66□□□□□ -0.06
SKI8Q02793 SUF9tP(UGG)F 72 nt14.66□□□□□ -0.06
SKI8Q02793 SUF8tP(UGG)H 72 nt14.66□□□□□ -0.06
SKI8Q02793 tP(UGG)LtP(UGG)L 72 nt14.66□□□□□ -0.06
SKI8Q02793 SUF7tP(UGG)M 72 nt14.66□□□□□ -0.06
SKI8Q02793 tP(UGG)N1tP(UGG)N1 72 nt14.66□□□□□ -0.06
SKI8Q02793 tP(UGG)N2tP(UGG)N2 72 nt14.66□□□□□ -0.06
SKI8Q02793 tP(UGG)O1tP(UGG)O1 72 nt14.66□□□□□ -0.06
SKI8Q02793 SUF11tP(UGG)O2 72 nt14.66□□□□□ -0.06
SKI8Q02793 SSA3YBL075C 1950 nt14.62□□□□□ -0.07
SKI8Q02793 CCC1YLR220W 969 nt14.44□□□□□ -0.1
SKI8Q02793 PKP1YIL042C 1185 nt14.43□□□□□ -0.1
SKI8Q02793 RPP1BYDL130W 321 nt14.37□□□□□ -0.11
SKI8Q02793 RVS167YDR388W 1449 nt14.23□□□□□ -0.13
SKI8Q02793 PUT4YOR348C 1884 nt14.21□□□□□ -0.14
SKI8Q02793 SCJ1YMR214W 1134 nt14.15□□□□□ -0.14
SKI8Q02793 ATS1YAL020C 1002 nt13.9□□□□□ -0.18
SKI8Q02793 ARE1YCR048W 1833 nt13.78□□□□□ -0.2
SKI8Q02793 PET122YER153C 765 nt13.69□□□□□ -0.22
SKI8Q02793 tP(UGG)O3tP(UGG)O3 72 nt13.67□□□□□ -0.22
SKI8Q02793 SHR5YOL110W 714 nt13.67□□□□□ -0.22
SKI8Q02793 POA1YBR022W 534 nt13.67□□□□□ -0.22
SKI8Q02793 URN1YPR152C 1398 nt13.61□□□□□ -0.23
SKI8Q02793 SCR1SCR1 522 nt13.61□□□□□ -0.23
SKI8Q02793 SAH1YER043C 1350 nt13.59□□□□□ -0.23
SKI8Q02793 YHR049C-AYHR049C-A 297 nt13.56□□□□□ -0.24
SKI8Q02793 OPI9YLR338W 858 nt13.54□□□□□ -0.24
SKI8Q02793 BSC6YOL137W 1494 nt13.49□□□□□ -0.25
SKI8Q02793 DEP1YAL013W 1218 nt13.44□□□□□ -0.26
SKI8Q02793 SPT5YML010W 3192 nt13.41□□□□□ -0.26
SKI8Q02793 RRN5YLR141W 1092 nt13.34□□□□□ -0.27
SKI8Q02793 YDJ1YNL064C 1230 nt13.24□□□□□ -0.29
SKI8Q02793 RPN10YHR200W 807 nt13.23□□□□□ -0.29
SKI8Q02793 YNL208WYNL208W 600 nt13.17□□□□□ -0.3
SKI8Q02793 BUD23YCR047C 828 nt13.16□□□□□ -0.3
SKI8Q02793 PUN1YLR414C 792 nt13.11□□□□□ -0.31
SKI8Q02793 SSA4YER103W 1929 nt13.1□□□□□ -0.31
SKI8Q02793 RSB1YOR049C 1065 nt13.09□□□□□ -0.31
SKI8Q02793 YER088W-BYER088W-B 147 nt13.06□□□□□ -0.32
SKI8Q02793 PTC2YER089C 1395 nt13.06□□□□□ -0.32
SKI8Q02793 GAR1YHR089C 618 nt12.99□□□□□ -0.33
SKI8Q02793 NAB2YGL122C 1578 nt12.96□□□□□ -0.33
SKI8Q02793 YJR018WYJR018W 363 nt12.94□□□□□ -0.34
SKI8Q02793 PST2YDR032C 597 nt12.86□□□□□ -0.35
SKI8Q02793 FIS1YIL065C 468 nt12.78□□□□□ -0.36
SKI8Q02793 MEP2YNL142W 1500 nt12.73□□□□□ -0.37
SKI8Q02793 YJR120WYJR120W 351 nt12.73□□□□□ -0.37
SKI8Q02793 BDF1YLR399C 2061 nt12.7□□□□□ -0.38
SKI8Q02793 DAL1YIR027C 1383 nt12.69□□□□□ -0.38
SKI8Q02793 TIR1YER011W 765 nt12.6□□□□□ -0.39
SKI8Q02793 SSA1YAL005C 1929 nt12.6□□□□□ -0.39
SKI8Q02793 FPR4YLR449W 1179 nt12.59□□□□□ -0.39
SKI8Q02793 PHO4YFR034C 939 nt12.58□□□□□ -0.4
SKI8Q02793 YPS1YLR120C 1710 nt12.56□□□□□ -0.4
SKI8Q02793 INM2YDR287W 879 nt12.54□□□□□ -0.4
SKI8Q02793 DCW1YKL046C 1350 nt12.54□□□□□ -0.4
SKI8Q02793 TAT1YBR069C 1860 nt12.51□□□□□ -0.41
SKI8Q02793 RPP2BYDR382W 333 nt12.49□□□□□ -0.41
SKI8Q02793 YKL097CYKL097C 411 nt12.4□□□□□ -0.42
SKI8Q02793 YDR095CYDR095C 411 nt12.39□□□□□ -0.43
SKI8Q02793 YHR165W-AYHR165W-A 312 nt12.39□□□□□ -0.43
SKI8Q02793 SRB2YHR041C 633 nt12.34□□□□□ -0.43
SKI8Q02793 YBL100CYBL100C 315 nt12.34□□□□□ -0.43
SKI8Q02793 EMI2YDR516C 1503 nt12.33□□□□□ -0.44
SKI8Q02793 YBR220CYBR220C 1683 nt12.32□□□□□ -0.44
SKI8Q02793 SHU1YHL006C 453 nt12.29□□□□□ -0.44
SKI8Q02793 YMR090WYMR090W 684 nt12.22□□□□□ -0.45
SKI8Q02793 PTP1YDL230W 1008 nt12.21□□□□□ -0.45
SKI8Q02793 BDH2YAL061W 1254 nt12.21□□□□□ -0.45
SKI8Q02793 YDL221WYDL221W 552 nt12.2□□□□□ -0.46
SKI8Q02793 CAC2YML102W 1407 nt12.2□□□□□ -0.46
SKI8Q02793 FUN26YAL022C 1554 nt12.19□□□□□ -0.46
SKI8Q02793 SDH1YKL148C 1923 nt12.17□□□□□ -0.46
SKI8Q02793 RPP2AYOL039W 321 nt12.13□□□□□ -0.47
SKI8Q02793 ALF1YNL148C 765 nt12.07□□□□□ -0.48
SKI8Q02793 YAL037C-BYAL037C-B 975 nt12.06□□□□□ -0.48
SKI8Q02793 TRM9YML014W 840 nt12.03□□□□□ -0.48
SKI8Q02793 IRC15YPL017C 1500 nt12.02□□□□□ -0.48
SKI8Q02793 SCC4YER147C 1875 nt12□□□□□ -0.49
SKI8Q02793 CCT6YDR188W 1641 nt12□□□□□ -0.49
SKI8Q02793 SIS1YNL007C 1059 nt11.99□□□□□ -0.49
SKI8Q02793 PAC11YDR488C 1602 nt11.97□□□□□ -0.49
SKI8Q02793 PCH2YBR186W 1695 nt11.97□□□□□ -0.49
SKI8Q02793 WWM1YFL010C 636 nt11.96□□□□□ -0.49
SKI8Q02793 LSM3YLR438C-A 270 nt11.95□□□□□ -0.5
SKI8Q02793 GUT2YIL155C 1950 nt11.94□□□□□ -0.5
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms