Protein–RNA interactions for Protein: P12904

SNF4, 5'-AMP-activated protein kinase subunit gamma, yeastyeast

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF4P12904 NSR1YGR159C 1245 nt19.13■□□□□ 0.65
SNF4P12904 YML009W-BYML009W-B 477 nt18.78■□□□□ 0.6
SNF4P12904 NOP1YDL014W 984 nt18■□□□□ 0.47
SNF4P12904 MDJ1YFL016C 1536 nt17.52■□□□□ 0.4
SNF4P12904 YKL036CYKL036C 393 nt16.13■□□□□ 0.17
SNF4P12904 YJL027CYJL027C 417 nt16.09■□□□□ 0.17
SNF4P12904 SRX1YKL086W 384 nt15.76■□□□□ 0.11
SNF4P12904 Q0297Q0297 156 nt15.62■□□□□ 0.09
SNF4P12904 DBP2YNL112W 1641 nt15.32■□□□□ 0.04
SNF4P12904 YBR190WYBR190W 312 nt15.06■□□□□ 0
SNF4P12904 YCR051WYCR051W 669 nt14.91□□□□□ -0.02
SNF4P12904 RTC3YHR087W 336 nt14.69□□□□□ -0.06
SNF4P12904 TRN1tP(UGG)A 72 nt14.58□□□□□ -0.08
SNF4P12904 SUF9tP(UGG)F 72 nt14.58□□□□□ -0.08
SNF4P12904 SUF8tP(UGG)H 72 nt14.58□□□□□ -0.08
SNF4P12904 tP(UGG)LtP(UGG)L 72 nt14.58□□□□□ -0.08
SNF4P12904 SUF7tP(UGG)M 72 nt14.58□□□□□ -0.08
SNF4P12904 tP(UGG)N1tP(UGG)N1 72 nt14.58□□□□□ -0.08
SNF4P12904 tP(UGG)N2tP(UGG)N2 72 nt14.58□□□□□ -0.08
SNF4P12904 tP(UGG)O1tP(UGG)O1 72 nt14.58□□□□□ -0.08
SNF4P12904 SUF11tP(UGG)O2 72 nt14.58□□□□□ -0.08
SNF4P12904 SSA3YBL075C 1950 nt14.53□□□□□ -0.08
SNF4P12904 CCC1YLR220W 969 nt14.43□□□□□ -0.1
SNF4P12904 SCS3YGL126W 1143 nt14.42□□□□□ -0.1
SNF4P12904 RVS167YDR388W 1449 nt14.19□□□□□ -0.14
SNF4P12904 PUT4YOR348C 1884 nt14.12□□□□□ -0.15
SNF4P12904 SCJ1YMR214W 1134 nt14.08□□□□□ -0.16
SNF4P12904 YOL085CYOL085C 342 nt14.02□□□□□ -0.17
SNF4P12904 RPP1BYDL130W 321 nt14.01□□□□□ -0.17
SNF4P12904 PKP1YIL042C 1185 nt13.88□□□□□ -0.19
SNF4P12904 ARE1YCR048W 1833 nt13.71□□□□□ -0.22
SNF4P12904 POA1YBR022W 534 nt13.63□□□□□ -0.23
SNF4P12904 tP(UGG)O3tP(UGG)O3 72 nt13.62□□□□□ -0.23
SNF4P12904 SHR5YOL110W 714 nt13.6□□□□□ -0.23
SNF4P12904 URN1YPR152C 1398 nt13.57□□□□□ -0.24
SNF4P12904 SAH1YER043C 1350 nt13.55□□□□□ -0.24
SNF4P12904 YHR049C-AYHR049C-A 297 nt13.51□□□□□ -0.25
SNF4P12904 OPI9YLR338W 858 nt13.48□□□□□ -0.25
SNF4P12904 PET122YER153C 765 nt13.47□□□□□ -0.25
SNF4P12904 BSC6YOL137W 1494 nt13.44□□□□□ -0.26
SNF4P12904 DEP1YAL013W 1218 nt13.42□□□□□ -0.26
SNF4P12904 SPT5YML010W 3192 nt13.27□□□□□ -0.29
SNF4P12904 RPN10YHR200W 807 nt13.2□□□□□ -0.3
SNF4P12904 YDJ1YNL064C 1230 nt13.17□□□□□ -0.3
SNF4P12904 BUD23YCR047C 828 nt13.14□□□□□ -0.31
SNF4P12904 YNL208WYNL208W 600 nt13.12□□□□□ -0.31
SNF4P12904 SCR1SCR1 522 nt13.12□□□□□ -0.31
SNF4P12904 PUN1YLR414C 792 nt13.06□□□□□ -0.32
SNF4P12904 RRN5YLR141W 1092 nt13.03□□□□□ -0.32
SNF4P12904 SSA4YER103W 1929 nt13.02□□□□□ -0.32
SNF4P12904 PTC2YER089C 1395 nt13.02□□□□□ -0.33
SNF4P12904 GAR1YHR089C 618 nt12.97□□□□□ -0.33
SNF4P12904 NAB2YGL122C 1578 nt12.91□□□□□ -0.34
SNF4P12904 YJR018WYJR018W 363 nt12.91□□□□□ -0.34
SNF4P12904 YER088W-BYER088W-B 147 nt12.77□□□□□ -0.37
SNF4P12904 ATS1YAL020C 1002 nt12.75□□□□□ -0.37
SNF4P12904 FIS1YIL065C 468 nt12.71□□□□□ -0.37
SNF4P12904 MEP2YNL142W 1500 nt12.67□□□□□ -0.38
SNF4P12904 YJR120WYJR120W 351 nt12.64□□□□□ -0.39
SNF4P12904 DAL1YIR027C 1383 nt12.64□□□□□ -0.39
SNF4P12904 FPR4YLR449W 1179 nt12.6□□□□□ -0.39
SNF4P12904 BDF1YLR399C 2061 nt12.59□□□□□ -0.39
SNF4P12904 RSB1YOR049C 1065 nt12.57□□□□□ -0.4
SNF4P12904 TIR1YER011W 765 nt12.56□□□□□ -0.4
SNF4P12904 SSA1YAL005C 1929 nt12.54□□□□□ -0.4
SNF4P12904 PHO4YFR034C 939 nt12.53□□□□□ -0.4
SNF4P12904 INM2YDR287W 879 nt12.5□□□□□ -0.41
SNF4P12904 YPS1YLR120C 1710 nt12.49□□□□□ -0.41
SNF4P12904 DCW1YKL046C 1350 nt12.48□□□□□ -0.41
SNF4P12904 RPP2BYDR382W 333 nt12.46□□□□□ -0.41
SNF4P12904 TAT1YBR069C 1860 nt12.4□□□□□ -0.42
SNF4P12904 YHR165W-AYHR165W-A 312 nt12.36□□□□□ -0.43
SNF4P12904 YDR095CYDR095C 411 nt12.32□□□□□ -0.44
SNF4P12904 YBL100CYBL100C 315 nt12.3□□□□□ -0.44
SNF4P12904 EMI2YDR516C 1503 nt12.28□□□□□ -0.44
SNF4P12904 SRB2YHR041C 633 nt12.27□□□□□ -0.45
SNF4P12904 YBR220CYBR220C 1683 nt12.25□□□□□ -0.45
SNF4P12904 YMR090WYMR090W 684 nt12.2□□□□□ -0.46
SNF4P12904 FUN26YAL022C 1554 nt12.15□□□□□ -0.46
SNF4P12904 BDH2YAL061W 1254 nt12.15□□□□□ -0.46
SNF4P12904 CAC2YML102W 1407 nt12.14□□□□□ -0.47
SNF4P12904 YDL221WYDL221W 552 nt12.14□□□□□ -0.47
SNF4P12904 PTP1YDL230W 1008 nt12.14□□□□□ -0.47
SNF4P12904 SDH1YKL148C 1923 nt12.1□□□□□ -0.47
SNF4P12904 RPP2AYOL039W 321 nt12.09□□□□□ -0.47
SNF4P12904 ALF1YNL148C 765 nt12.05□□□□□ -0.48
SNF4P12904 TRM9YML014W 840 nt12.01□□□□□ -0.49
SNF4P12904 IRC15YPL017C 1500 nt11.96□□□□□ -0.5
SNF4P12904 SCC4YER147C 1875 nt11.95□□□□□ -0.5
SNF4P12904 WWM1YFL010C 636 nt11.93□□□□□ -0.5
SNF4P12904 CCT6YDR188W 1641 nt11.93□□□□□ -0.5
SNF4P12904 SIS1YNL007C 1059 nt11.92□□□□□ -0.5
SNF4P12904 PAC11YDR488C 1602 nt11.92□□□□□ -0.5
SNF4P12904 PST2YDR032C 597 nt11.91□□□□□ -0.5
SNF4P12904 LSM3YLR438C-A 270 nt11.89□□□□□ -0.51
SNF4P12904 PCH2YBR186W 1695 nt11.89□□□□□ -0.51
SNF4P12904 GIS3YLR094C 1509 nt11.87□□□□□ -0.51
SNF4P12904 GUT2YIL155C 1950 nt11.86□□□□□ -0.51
SNF4P12904 SEC11YIR022W 504 nt11.84□□□□□ -0.51
SNF4P12904 SUF2tP(AGG)C 72 nt11.83□□□□□ -0.52
Retrieved 100 of 7,029 protein–RNA pairs in 15.9 ms