Protein–RNA interactions for Protein: P40548

SNL1, HSP70 co-chaperone SNL1, yeastyeast

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNL1P40548 NSR1YGR159C 1245 nt19.09■□□□□ 0.65
SNL1P40548 YML009W-BYML009W-B 477 nt18.74■□□□□ 0.59
SNL1P40548 NOP1YDL014W 984 nt17.94■□□□□ 0.46
SNL1P40548 MDJ1YFL016C 1536 nt17.57■□□□□ 0.4
SNL1P40548 YJL027CYJL027C 417 nt16.13■□□□□ 0.17
SNL1P40548 YKL036CYKL036C 393 nt15.99■□□□□ 0.15
SNL1P40548 SRX1YKL086W 384 nt15.66■□□□□ 0.1
SNL1P40548 Q0297Q0297 156 nt15.49■□□□□ 0.07
SNL1P40548 DBP2YNL112W 1641 nt15.28■□□□□ 0.04
SNL1P40548 YBR190WYBR190W 312 nt15.1■□□□□ 0.01
SNL1P40548 SSA3YBL075C 1950 nt14.87□□□□□ -0.03
SNL1P40548 YCR051WYCR051W 669 nt14.84□□□□□ -0.03
SNL1P40548 RTC3YHR087W 336 nt14.77□□□□□ -0.05
SNL1P40548 TRN1tP(UGG)A 72 nt14.53□□□□□ -0.08
SNL1P40548 SUF9tP(UGG)F 72 nt14.53□□□□□ -0.08
SNL1P40548 SUF8tP(UGG)H 72 nt14.53□□□□□ -0.08
SNL1P40548 tP(UGG)LtP(UGG)L 72 nt14.53□□□□□ -0.08
SNL1P40548 SUF7tP(UGG)M 72 nt14.53□□□□□ -0.08
SNL1P40548 tP(UGG)N1tP(UGG)N1 72 nt14.53□□□□□ -0.08
SNL1P40548 tP(UGG)N2tP(UGG)N2 72 nt14.53□□□□□ -0.08
SNL1P40548 tP(UGG)O1tP(UGG)O1 72 nt14.53□□□□□ -0.08
SNL1P40548 SUF11tP(UGG)O2 72 nt14.53□□□□□ -0.08
SNL1P40548 CCC1YLR220W 969 nt14.4□□□□□ -0.1
SNL1P40548 SCS3YGL126W 1143 nt14.26□□□□□ -0.13
SNL1P40548 RVS167YDR388W 1449 nt14.24□□□□□ -0.13
SNL1P40548 PUT4YOR348C 1884 nt14.18□□□□□ -0.14
SNL1P40548 SCJ1YMR214W 1134 nt14.06□□□□□ -0.16
SNL1P40548 RPP1BYDL130W 321 nt13.91□□□□□ -0.18
SNL1P40548 YOL085CYOL085C 342 nt13.87□□□□□ -0.19
SNL1P40548 PKP1YIL042C 1185 nt13.76□□□□□ -0.21
SNL1P40548 ARE1YCR048W 1833 nt13.75□□□□□ -0.21
SNL1P40548 POA1YBR022W 534 nt13.7□□□□□ -0.22
SNL1P40548 YHR049C-AYHR049C-A 297 nt13.6□□□□□ -0.23
SNL1P40548 SAH1YER043C 1350 nt13.59□□□□□ -0.23
SNL1P40548 URN1YPR152C 1398 nt13.59□□□□□ -0.23
SNL1P40548 SHR5YOL110W 714 nt13.59□□□□□ -0.23
SNL1P40548 tP(UGG)O3tP(UGG)O3 72 nt13.54□□□□□ -0.24
SNL1P40548 BSC6YOL137W 1494 nt13.52□□□□□ -0.25
SNL1P40548 OPI9YLR338W 858 nt13.5□□□□□ -0.25
SNL1P40548 DEP1YAL013W 1218 nt13.43□□□□□ -0.26
SNL1P40548 PET122YER153C 765 nt13.39□□□□□ -0.27
SNL1P40548 SPT5YML010W 3192 nt13.32□□□□□ -0.28
SNL1P40548 RPN10YHR200W 807 nt13.24□□□□□ -0.29
SNL1P40548 BUD23YCR047C 828 nt13.23□□□□□ -0.29
SNL1P40548 SSA4YER103W 1929 nt13.15□□□□□ -0.3
SNL1P40548 YNL208WYNL208W 600 nt13.13□□□□□ -0.31
SNL1P40548 PUN1YLR414C 792 nt13.1□□□□□ -0.31
SNL1P40548 YDJ1YNL064C 1230 nt13.09□□□□□ -0.31
SNL1P40548 SCR1SCR1 522 nt13.07□□□□□ -0.32
SNL1P40548 PTC2YER089C 1395 nt13.07□□□□□ -0.32
SNL1P40548 NAB2YGL122C 1578 nt12.97□□□□□ -0.33
SNL1P40548 GAR1YHR089C 618 nt12.92□□□□□ -0.34
SNL1P40548 YJR018WYJR018W 363 nt12.91□□□□□ -0.34
SNL1P40548 RRN5YLR141W 1092 nt12.91□□□□□ -0.34
SNL1P40548 FIS1YIL065C 468 nt12.75□□□□□ -0.37
SNL1P40548 MEP2YNL142W 1500 nt12.75□□□□□ -0.37
SNL1P40548 BDF1YLR399C 2061 nt12.69□□□□□ -0.38
SNL1P40548 DAL1YIR027C 1383 nt12.69□□□□□ -0.38
SNL1P40548 YER088W-BYER088W-B 147 nt12.67□□□□□ -0.38
SNL1P40548 FPR4YLR449W 1179 nt12.67□□□□□ -0.38
SNL1P40548 YJR120WYJR120W 351 nt12.6□□□□□ -0.39
SNL1P40548 PHO4YFR034C 939 nt12.58□□□□□ -0.4
SNL1P40548 ATS1YAL020C 1002 nt12.57□□□□□ -0.4
SNL1P40548 DCW1YKL046C 1350 nt12.55□□□□□ -0.4
SNL1P40548 YPS1YLR120C 1710 nt12.54□□□□□ -0.4
SNL1P40548 TAT1YBR069C 1860 nt12.52□□□□□ -0.41
SNL1P40548 INM2YDR287W 879 nt12.51□□□□□ -0.41
SNL1P40548 TIR1YER011W 765 nt12.51□□□□□ -0.41
SNL1P40548 RPP2BYDR382W 333 nt12.5□□□□□ -0.41
SNL1P40548 SSA1YAL005C 1929 nt12.49□□□□□ -0.41
SNL1P40548 PAC11YDR488C 1602 nt12.49□□□□□ -0.41
SNL1P40548 RSB1YOR049C 1065 nt12.49□□□□□ -0.41
SNL1P40548 YHR165W-AYHR165W-A 312 nt12.45□□□□□ -0.42
SNL1P40548 YDR095CYDR095C 411 nt12.36□□□□□ -0.43
SNL1P40548 EMI2YDR516C 1503 nt12.35□□□□□ -0.43
SNL1P40548 YBL100CYBL100C 315 nt12.33□□□□□ -0.44
SNL1P40548 YBR220CYBR220C 1683 nt12.32□□□□□ -0.44
SNL1P40548 YMR090WYMR090W 684 nt12.31□□□□□ -0.44
SNL1P40548 NVJ2YPR091C 2313 nt12.25□□□□□ -0.45
SNL1P40548 YDL221WYDL221W 552 nt12.22□□□□□ -0.45
SNL1P40548 SDH1YKL148C 1923 nt12.18□□□□□ -0.46
SNL1P40548 SRB2YHR041C 633 nt12.18□□□□□ -0.46
SNL1P40548 CAC2YML102W 1407 nt12.16□□□□□ -0.46
SNL1P40548 FUN26YAL022C 1554 nt12.16□□□□□ -0.46
SNL1P40548 BDH2YAL061W 1254 nt12.14□□□□□ -0.47
SNL1P40548 PTP1YDL230W 1008 nt12.13□□□□□ -0.47
SNL1P40548 ALF1YNL148C 765 nt12.12□□□□□ -0.47
SNL1P40548 RPP2AYOL039W 321 nt12.12□□□□□ -0.47
SNL1P40548 SCC4YER147C 1875 nt12.02□□□□□ -0.48
SNL1P40548 TRM9YML014W 840 nt12.01□□□□□ -0.49
SNL1P40548 PCH2YBR186W 1695 nt12□□□□□ -0.49
SNL1P40548 IRC15YPL017C 1500 nt11.97□□□□□ -0.49
SNL1P40548 SEC11YIR022W 504 nt11.95□□□□□ -0.5
SNL1P40548 GUT2YIL155C 1950 nt11.95□□□□□ -0.5
SNL1P40548 CCT6YDR188W 1641 nt11.93□□□□□ -0.5
SNL1P40548 GIS3YLR094C 1509 nt11.92□□□□□ -0.5
SNL1P40548 SIS1YNL007C 1059 nt11.92□□□□□ -0.5
SNL1P40548 WWM1YFL010C 636 nt11.87□□□□□ -0.51
SNL1P40548 SUF2tP(AGG)C 72 nt11.87□□□□□ -0.51
SNL1P40548 SUF10tP(AGG)N 72 nt11.87□□□□□ -0.51
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms