Protein–RNA interactions for Protein: P13099

TOP3, DNA topoisomerase 3, yeastyeast

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TOP3P13099 NSR1YGR159C 1245 nt19.51■□□□□ 0.71
TOP3P13099 YML009W-BYML009W-B 477 nt19.34■□□□□ 0.69
TOP3P13099 NOP1YDL014W 984 nt18.7■□□□□ 0.58
TOP3P13099 MDJ1YFL016C 1536 nt17.62■□□□□ 0.41
TOP3P13099 YKL036CYKL036C 393 nt16.9■□□□□ 0.3
TOP3P13099 SRX1YKL086W 384 nt16.29■□□□□ 0.2
TOP3P13099 YJL027CYJL027C 417 nt16.27■□□□□ 0.2
TOP3P13099 Q0297Q0297 156 nt16.19■□□□□ 0.18
TOP3P13099 YCR051WYCR051W 669 nt15.47■□□□□ 0.07
TOP3P13099 DBP2YNL112W 1641 nt15.42■□□□□ 0.06
TOP3P13099 SCS3YGL126W 1143 nt15.18■□□□□ 0.02
TOP3P13099 YBR190WYBR190W 312 nt15.13■□□□□ 0.01
TOP3P13099 TRN1tP(UGG)A 72 nt14.9□□□□□ -0.02
TOP3P13099 SUF9tP(UGG)F 72 nt14.9□□□□□ -0.02
TOP3P13099 SUF8tP(UGG)H 72 nt14.9□□□□□ -0.02
TOP3P13099 tP(UGG)LtP(UGG)L 72 nt14.9□□□□□ -0.02
TOP3P13099 SUF7tP(UGG)M 72 nt14.9□□□□□ -0.02
TOP3P13099 tP(UGG)N1tP(UGG)N1 72 nt14.9□□□□□ -0.02
TOP3P13099 tP(UGG)N2tP(UGG)N2 72 nt14.9□□□□□ -0.02
TOP3P13099 tP(UGG)O1tP(UGG)O1 72 nt14.9□□□□□ -0.02
TOP3P13099 SUF11tP(UGG)O2 72 nt14.9□□□□□ -0.02
TOP3P13099 RTC3YHR087W 336 nt14.83□□□□□ -0.04
TOP3P13099 CCC1YLR220W 969 nt14.83□□□□□ -0.04
TOP3P13099 YOL085CYOL085C 342 nt14.64□□□□□ -0.07
TOP3P13099 RPP1BYDL130W 321 nt14.55□□□□□ -0.08
TOP3P13099 RVS167YDR388W 1449 nt14.51□□□□□ -0.09
TOP3P13099 PKP1YIL042C 1185 nt14.47□□□□□ -0.09
TOP3P13099 SSA3YBL075C 1950 nt14.39□□□□□ -0.11
TOP3P13099 SCJ1YMR214W 1134 nt14.28□□□□□ -0.12
TOP3P13099 tP(UGG)O3tP(UGG)O3 72 nt14.02□□□□□ -0.17
TOP3P13099 PUT4YOR348C 1884 nt13.96□□□□□ -0.17
TOP3P13099 PET122YER153C 765 nt13.93□□□□□ -0.18
TOP3P13099 Q0182Q0182 405 nt13.89□□□□□ -0.19
TOP3P13099 SHR5YOL110W 714 nt13.88□□□□□ -0.19
TOP3P13099 SCR1SCR1 522 nt13.74□□□□□ -0.21
TOP3P13099 URN1YPR152C 1398 nt13.71□□□□□ -0.21
TOP3P13099 DEP1YAL013W 1218 nt13.63□□□□□ -0.23
TOP3P13099 ARE1YCR048W 1833 nt13.61□□□□□ -0.23
TOP3P13099 MOT3YMR070W 1473 nt13.59□□□□□ -0.23
TOP3P13099 SAH1YER043C 1350 nt13.58□□□□□ -0.23
TOP3P13099 OPI9YLR338W 858 nt13.56□□□□□ -0.24
TOP3P13099 POA1YBR022W 534 nt13.55□□□□□ -0.24
TOP3P13099 YDJ1YNL064C 1230 nt13.54□□□□□ -0.24
TOP3P13099 RRN5YLR141W 1092 nt13.51□□□□□ -0.25
TOP3P13099 ATS1YAL020C 1002 nt13.49□□□□□ -0.25
TOP3P13099 RPN10YHR200W 807 nt13.46□□□□□ -0.25
TOP3P13099 YHR049C-AYHR049C-A 297 nt13.45□□□□□ -0.26
TOP3P13099 YNL208WYNL208W 600 nt13.37□□□□□ -0.27
TOP3P13099 GAR1YHR089C 618 nt13.34□□□□□ -0.27
TOP3P13099 BSC6YOL137W 1494 nt13.29□□□□□ -0.28
TOP3P13099 YER088W-BYER088W-B 147 nt13.23□□□□□ -0.29
TOP3P13099 PUN1YLR414C 792 nt13.18□□□□□ -0.3
TOP3P13099 BUD23YCR047C 828 nt13.16□□□□□ -0.3
TOP3P13099 RSB1YOR049C 1065 nt13.16□□□□□ -0.3
TOP3P13099 PTC2YER089C 1395 nt13.09□□□□□ -0.31
TOP3P13099 YJR018WYJR018W 363 nt13.06□□□□□ -0.32
TOP3P13099 NAB2YGL122C 1578 nt12.97□□□□□ -0.33
TOP3P13099 TIR1YER011W 765 nt12.89□□□□□ -0.35
TOP3P13099 SPT5YML010W 3192 nt12.84□□□□□ -0.35
TOP3P13099 SSA1YAL005C 1929 nt12.78□□□□□ -0.36
TOP3P13099 RPP2BYDR382W 333 nt12.75□□□□□ -0.37
TOP3P13099 SSA4YER103W 1929 nt12.74□□□□□ -0.37
TOP3P13099 FPR4YLR449W 1179 nt12.74□□□□□ -0.37
TOP3P13099 DAL1YIR027C 1383 nt12.72□□□□□ -0.37
TOP3P13099 YJR120WYJR120W 351 nt12.71□□□□□ -0.37
TOP3P13099 FIS1YIL065C 468 nt12.69□□□□□ -0.38
TOP3P13099 INM2YDR287W 879 nt12.66□□□□□ -0.38
TOP3P13099 PHO4YFR034C 939 nt12.59□□□□□ -0.39
TOP3P13099 PST2YDR032C 597 nt12.54□□□□□ -0.4
TOP3P13099 MEP2YNL142W 1500 nt12.5□□□□□ -0.41
TOP3P13099 YBL100CYBL100C 315 nt12.47□□□□□ -0.41
TOP3P13099 YPS1YLR120C 1710 nt12.46□□□□□ -0.41
TOP3P13099 SRB2YHR041C 633 nt12.46□□□□□ -0.41
TOP3P13099 YHR165W-AYHR165W-A 312 nt12.39□□□□□ -0.43
TOP3P13099 BDH2YAL061W 1254 nt12.39□□□□□ -0.43
TOP3P13099 BDF1YLR399C 2061 nt12.32□□□□□ -0.44
TOP3P13099 YDR095CYDR095C 411 nt12.31□□□□□ -0.44
TOP3P13099 FUN26YAL022C 1554 nt12.3□□□□□ -0.44
TOP3P13099 DCW1YKL046C 1350 nt12.3□□□□□ -0.44
TOP3P13099 WWM1YFL010C 636 nt12.26□□□□□ -0.45
TOP3P13099 TRM9YML014W 840 nt12.26□□□□□ -0.45
TOP3P13099 ALF1YNL148C 765 nt12.24□□□□□ -0.45
TOP3P13099 LSM3YLR438C-A 270 nt12.17□□□□□ -0.46
TOP3P13099 EMI2YDR516C 1503 nt12.15□□□□□ -0.46
TOP3P13099 YMR090WYMR090W 684 nt12.14□□□□□ -0.47
TOP3P13099 TAT1YBR069C 1860 nt12.13□□□□□ -0.47
TOP3P13099 RPP2AYOL039W 321 nt12.12□□□□□ -0.47
TOP3P13099 SHU1YHL006C 453 nt12.11□□□□□ -0.47
TOP3P13099 CCT6YDR188W 1641 nt12.11□□□□□ -0.47
TOP3P13099 YGR021WYGR021W 873 nt12.09□□□□□ -0.47
TOP3P13099 SUF2tP(AGG)C 72 nt12.07□□□□□ -0.48
TOP3P13099 SUF10tP(AGG)N 72 nt12.07□□□□□ -0.48
TOP3P13099 YFL021C-AYFL021C-A 855 nt12.06□□□□□ -0.48
TOP3P13099 YAL037C-BYAL037C-B 975 nt12.06□□□□□ -0.48
TOP3P13099 PTP1YDL230W 1008 nt12.05□□□□□ -0.48
TOP3P13099 CAC2YML102W 1407 nt12.03□□□□□ -0.48
TOP3P13099 YDL221WYDL221W 552 nt12.02□□□□□ -0.49
TOP3P13099 SIS1YNL007C 1059 nt12.01□□□□□ -0.49
TOP3P13099 YBR220CYBR220C 1683 nt12□□□□□ -0.49
TOP3P13099 HOM6YJR139C 1080 nt12□□□□□ -0.49
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms