Protein–RNA interactions for Protein: O94742

SEM1, 26S proteasome complex subunit SEM1, yeastyeast

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEM1O94742 YML009W-BYML009W-B 477 nt20.28■□□□□ 0.84
SEM1O94742 NSR1YGR159C 1245 nt20.19■□□□□ 0.82
SEM1O94742 NOP1YDL014W 984 nt19.86■□□□□ 0.77
SEM1O94742 YKL036CYKL036C 393 nt18.28■□□□□ 0.52
SEM1O94742 MDJ1YFL016C 1536 nt17.75■□□□□ 0.43
SEM1O94742 Q0297Q0297 156 nt17.31■□□□□ 0.36
SEM1O94742 SRX1YKL086W 384 nt17.27■□□□□ 0.36
SEM1O94742 YJL027CYJL027C 417 nt17.05■□□□□ 0.32
SEM1O94742 SCS3YGL126W 1143 nt16.56■□□□□ 0.24
SEM1O94742 YCR051WYCR051W 669 nt16.37■□□□□ 0.21
SEM1O94742 YOL085CYOL085C 342 nt15.76■□□□□ 0.11
SEM1O94742 DBP2YNL112W 1641 nt15.68■□□□□ 0.1
SEM1O94742 TRN1tP(UGG)A 72 nt15.56■□□□□ 0.08
SEM1O94742 SUF9tP(UGG)F 72 nt15.56■□□□□ 0.08
SEM1O94742 SUF8tP(UGG)H 72 nt15.56■□□□□ 0.08
SEM1O94742 tP(UGG)LtP(UGG)L 72 nt15.56■□□□□ 0.08
SEM1O94742 SUF7tP(UGG)M 72 nt15.56■□□□□ 0.08
SEM1O94742 tP(UGG)N1tP(UGG)N1 72 nt15.56■□□□□ 0.08
SEM1O94742 tP(UGG)N2tP(UGG)N2 72 nt15.56■□□□□ 0.08
SEM1O94742 tP(UGG)O1tP(UGG)O1 72 nt15.56■□□□□ 0.08
SEM1O94742 SUF11tP(UGG)O2 72 nt15.56■□□□□ 0.08
SEM1O94742 RPP1BYDL130W 321 nt15.53■□□□□ 0.08
SEM1O94742 PKP1YIL042C 1185 nt15.46■□□□□ 0.07
SEM1O94742 CCC1YLR220W 969 nt15.38■□□□□ 0.05
SEM1O94742 YBR190WYBR190W 312 nt15.25■□□□□ 0.03
SEM1O94742 SSA3YBL075C 1950 nt15.02□□□□□ -0.01
SEM1O94742 RVS167YDR388W 1449 nt14.99□□□□□ -0.01
SEM1O94742 RTC3YHR087W 336 nt14.9□□□□□ -0.02
SEM1O94742 SCJ1YMR214W 1134 nt14.86□□□□□ -0.03
SEM1O94742 ATS1YAL020C 1002 nt14.84□□□□□ -0.03
SEM1O94742 SCR1SCR1 522 nt14.77□□□□□ -0.05
SEM1O94742 PET122YER153C 765 nt14.76□□□□□ -0.05
SEM1O94742 tP(UGG)O3tP(UGG)O3 72 nt14.73□□□□□ -0.05
SEM1O94742 SHR5YOL110W 714 nt14.4□□□□□ -0.1
SEM1O94742 RRN5YLR141W 1092 nt14.35□□□□□ -0.11
SEM1O94742 YDJ1YNL064C 1230 nt14.31□□□□□ -0.12
SEM1O94742 RSB1YOR049C 1065 nt14.11□□□□□ -0.15
SEM1O94742 PUT4YOR348C 1884 nt14.1□□□□□ -0.15
SEM1O94742 YER088W-BYER088W-B 147 nt14.06□□□□□ -0.16
SEM1O94742 URN1YPR152C 1398 nt13.94□□□□□ -0.18
SEM1O94742 GAR1YHR089C 618 nt13.91□□□□□ -0.18
SEM1O94742 RPN10YHR200W 807 nt13.88□□□□□ -0.19
SEM1O94742 DEP1YAL013W 1218 nt13.87□□□□□ -0.19
SEM1O94742 YNL208WYNL208W 600 nt13.77□□□□□ -0.21
SEM1O94742 OPI9YLR338W 858 nt13.75□□□□□ -0.21
SEM1O94742 PST2YDR032C 597 nt13.73□□□□□ -0.21
SEM1O94742 ARE1YCR048W 1833 nt13.61□□□□□ -0.23
SEM1O94742 SAH1YER043C 1350 nt13.58□□□□□ -0.24
SEM1O94742 POA1YBR022W 534 nt13.53□□□□□ -0.24
SEM1O94742 SPT5YML010W 3192 nt13.51□□□□□ -0.25
SEM1O94742 TIR1YER011W 765 nt13.47□□□□□ -0.25
SEM1O94742 PUN1YLR414C 792 nt13.41□□□□□ -0.26
SEM1O94742 BSC6YOL137W 1494 nt13.4□□□□□ -0.26
SEM1O94742 YHR049C-AYHR049C-A 297 nt13.37□□□□□ -0.27
SEM1O94742 YJR018WYJR018W 363 nt13.33□□□□□ -0.28
SEM1O94742 SSA4YER103W 1929 nt13.28□□□□□ -0.28
SEM1O94742 YKL097CYKL097C 411 nt13.26□□□□□ -0.29
SEM1O94742 Q0182Q0182 405 nt13.24□□□□□ -0.29
SEM1O94742 SSA1YAL005C 1929 nt13.22□□□□□ -0.29
SEM1O94742 RPP2BYDR382W 333 nt13.16□□□□□ -0.3
SEM1O94742 PTC2YER089C 1395 nt13.15□□□□□ -0.3
SEM1O94742 SHU1YHL006C 453 nt13.13□□□□□ -0.31
SEM1O94742 BUD23YCR047C 828 nt13.06□□□□□ -0.32
SEM1O94742 NAB2YGL122C 1578 nt13.03□□□□□ -0.32
SEM1O94742 YJR120WYJR120W 351 nt12.96□□□□□ -0.33
SEM1O94742 YGR021WYGR021W 873 nt12.92□□□□□ -0.34
SEM1O94742 BDF1YLR399C 2061 nt12.92□□□□□ -0.34
SEM1O94742 INM2YDR287W 879 nt12.91□□□□□ -0.34
SEM1O94742 YAL037C-BYAL037C-B 975 nt12.87□□□□□ -0.35
SEM1O94742 DAL1YIR027C 1383 nt12.86□□□□□ -0.35
SEM1O94742 SRB2YHR041C 633 nt12.86□□□□□ -0.35
SEM1O94742 BDH2YAL061W 1254 nt12.83□□□□□ -0.36
SEM1O94742 WWM1YFL010C 636 nt12.82□□□□□ -0.36
SEM1O94742 FPR4YLR449W 1179 nt12.8□□□□□ -0.36
SEM1O94742 FIS1YIL065C 468 nt12.75□□□□□ -0.37
SEM1O94742 HOM6YJR139C 1080 nt12.75□□□□□ -0.37
SEM1O94742 YFL021C-AYFL021C-A 855 nt12.73□□□□□ -0.37
SEM1O94742 YBL100CYBL100C 315 nt12.73□□□□□ -0.37
SEM1O94742 TAT1YBR069C 1860 nt12.72□□□□□ -0.37
SEM1O94742 LSM3YLR438C-A 270 nt12.71□□□□□ -0.37
SEM1O94742 PHO4YFR034C 939 nt12.69□□□□□ -0.38
SEM1O94742 MEP2YNL142W 1500 nt12.67□□□□□ -0.38
SEM1O94742 NPL3YDR432W 1245 nt12.64□□□□□ -0.39
SEM1O94742 MNP1YGL068W 585 nt12.63□□□□□ -0.39
SEM1O94742 TRM9YML014W 840 nt12.61□□□□□ -0.39
SEM1O94742 YOR139CYOR139C 393 nt12.6□□□□□ -0.39
SEM1O94742 YOL037CYOL037C 354 nt12.59□□□□□ -0.39
SEM1O94742 RKM5YLR137W 1104 nt12.58□□□□□ -0.4
SEM1O94742 MOT3YMR070W 1473 nt12.56□□□□□ -0.4
SEM1O94742 FUN26YAL022C 1554 nt12.56□□□□□ -0.4
SEM1O94742 ALF1YNL148C 765 nt12.46□□□□□ -0.41
SEM1O94742 DCW1YKL046C 1350 nt12.45□□□□□ -0.42
SEM1O94742 CCT6YDR188W 1641 nt12.44□□□□□ -0.42
SEM1O94742 SUF2tP(AGG)C 72 nt12.43□□□□□ -0.42
SEM1O94742 SUF10tP(AGG)N 72 nt12.43□□□□□ -0.42
SEM1O94742 YPS1YLR120C 1710 nt12.42□□□□□ -0.42
SEM1O94742 PAC11YDR488C 1602 nt12.39□□□□□ -0.43
SEM1O94742 YDR095CYDR095C 411 nt12.37□□□□□ -0.43
SEM1O94742 YBR220CYBR220C 1683 nt12.33□□□□□ -0.44
SEM1O94742 YHR165W-AYHR165W-A 312 nt12.33□□□□□ -0.44
Retrieved 100 of 7,029 protein–RNA pairs in 14 ms