Protein–RNA interactions for Protein: Q00711

SDH1, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, yeastyeast

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDH1Q00711 YML009W-BYML009W-B 477 nt19.74■□□□□ 0.75
SDH1Q00711 NSR1YGR159C 1245 nt19.66■□□□□ 0.74
SDH1Q00711 NOP1YDL014W 984 nt19.04■□□□□ 0.64
SDH1Q00711 MDJ1YFL016C 1536 nt17.68■□□□□ 0.42
SDH1Q00711 YKL036CYKL036C 393 nt17.48■□□□□ 0.39
SDH1Q00711 SRX1YKL086W 384 nt16.67■□□□□ 0.26
SDH1Q00711 Q0297Q0297 156 nt16.64■□□□□ 0.25
SDH1Q00711 YJL027CYJL027C 417 nt16.31■□□□□ 0.2
SDH1Q00711 SCS3YGL126W 1143 nt15.86■□□□□ 0.13
SDH1Q00711 YCR051WYCR051W 669 nt15.85■□□□□ 0.13
SDH1Q00711 DBP2YNL112W 1641 nt15.57■□□□□ 0.08
SDH1Q00711 YOL085CYOL085C 342 nt15.17■□□□□ 0.02
SDH1Q00711 TRN1tP(UGG)A 72 nt15.16■□□□□ 0.02
SDH1Q00711 SUF9tP(UGG)F 72 nt15.16■□□□□ 0.02
SDH1Q00711 SUF8tP(UGG)H 72 nt15.16■□□□□ 0.02
SDH1Q00711 tP(UGG)LtP(UGG)L 72 nt15.16■□□□□ 0.02
SDH1Q00711 SUF7tP(UGG)M 72 nt15.16■□□□□ 0.02
SDH1Q00711 tP(UGG)N1tP(UGG)N1 72 nt15.16■□□□□ 0.02
SDH1Q00711 tP(UGG)N2tP(UGG)N2 72 nt15.16■□□□□ 0.02
SDH1Q00711 tP(UGG)O1tP(UGG)O1 72 nt15.16■□□□□ 0.02
SDH1Q00711 SUF11tP(UGG)O2 72 nt15.16■□□□□ 0.02
SDH1Q00711 CCC1YLR220W 969 nt15.08■□□□□ 0
SDH1Q00711 PKP1YIL042C 1185 nt15.03■□□□□ -0
SDH1Q00711 YBR190WYBR190W 312 nt15.03■□□□□ -0
SDH1Q00711 RPP1BYDL130W 321 nt14.94□□□□□ -0.02
SDH1Q00711 RTC3YHR087W 336 nt14.75□□□□□ -0.05
SDH1Q00711 RVS167YDR388W 1449 nt14.54□□□□□ -0.08
SDH1Q00711 SCJ1YMR214W 1134 nt14.53□□□□□ -0.08
SDH1Q00711 SSA3YBL075C 1950 nt14.36□□□□□ -0.11
SDH1Q00711 PET122YER153C 765 nt14.35□□□□□ -0.11
SDH1Q00711 tP(UGG)O3tP(UGG)O3 72 nt14.32□□□□□ -0.12
SDH1Q00711 ATS1YAL020C 1002 nt14.14□□□□□ -0.15
SDH1Q00711 SCR1SCR1 522 nt14.09□□□□□ -0.15
SDH1Q00711 SHR5YOL110W 714 nt14.02□□□□□ -0.17
SDH1Q00711 RRN5YLR141W 1092 nt13.92□□□□□ -0.18
SDH1Q00711 YDJ1YNL064C 1230 nt13.8□□□□□ -0.2
SDH1Q00711 PUT4YOR348C 1884 nt13.8□□□□□ -0.2
SDH1Q00711 DEP1YAL013W 1218 nt13.76□□□□□ -0.21
SDH1Q00711 URN1YPR152C 1398 nt13.75□□□□□ -0.21
SDH1Q00711 YER088W-BYER088W-B 147 nt13.63□□□□□ -0.23
SDH1Q00711 GAR1YHR089C 618 nt13.6□□□□□ -0.23
SDH1Q00711 RSB1YOR049C 1065 nt13.58□□□□□ -0.24
SDH1Q00711 SAH1YER043C 1350 nt13.56□□□□□ -0.24
SDH1Q00711 OPI9YLR338W 858 nt13.54□□□□□ -0.24
SDH1Q00711 ARE1YCR048W 1833 nt13.52□□□□□ -0.25
SDH1Q00711 YNL208WYNL208W 600 nt13.44□□□□□ -0.26
SDH1Q00711 RPN10YHR200W 807 nt13.43□□□□□ -0.26
SDH1Q00711 POA1YBR022W 534 nt13.4□□□□□ -0.26
SDH1Q00711 YHR049C-AYHR049C-A 297 nt13.35□□□□□ -0.27
SDH1Q00711 TIR1YER011W 765 nt13.12□□□□□ -0.31
SDH1Q00711 PUN1YLR414C 792 nt13.12□□□□□ -0.31
SDH1Q00711 PST2YDR032C 597 nt13.11□□□□□ -0.31
SDH1Q00711 BSC6YOL137W 1494 nt13.1□□□□□ -0.31
SDH1Q00711 YJR018WYJR018W 363 nt13.09□□□□□ -0.31
SDH1Q00711 PTC2YER089C 1395 nt13.06□□□□□ -0.32
SDH1Q00711 BUD23YCR047C 828 nt13.05□□□□□ -0.32
SDH1Q00711 SSA1YAL005C 1929 nt13.01□□□□□ -0.33
SDH1Q00711 YJR120WYJR120W 351 nt12.91□□□□□ -0.34
SDH1Q00711 NAB2YGL122C 1578 nt12.86□□□□□ -0.35
SDH1Q00711 SRB2YHR041C 633 nt12.84□□□□□ -0.35
SDH1Q00711 RPP2BYDR382W 333 nt12.76□□□□□ -0.37
SDH1Q00711 Q0182Q0182 405 nt12.7□□□□□ -0.38
SDH1Q00711 FPR4YLR449W 1179 nt12.7□□□□□ -0.38
SDH1Q00711 FIS1YIL065C 468 nt12.69□□□□□ -0.38
SDH1Q00711 DAL1YIR027C 1383 nt12.67□□□□□ -0.38
SDH1Q00711 SHU1YHL006C 453 nt12.65□□□□□ -0.38
SDH1Q00711 INM2YDR287W 879 nt12.6□□□□□ -0.39
SDH1Q00711 SPT5YML010W 3192 nt12.58□□□□□ -0.4
SDH1Q00711 PHO4YFR034C 939 nt12.57□□□□□ -0.4
SDH1Q00711 WWM1YFL010C 636 nt12.56□□□□□ -0.4
SDH1Q00711 YAL037C-BYAL037C-B 975 nt12.56□□□□□ -0.4
SDH1Q00711 YKL097CYKL097C 411 nt12.52□□□□□ -0.41
SDH1Q00711 YBL100CYBL100C 315 nt12.51□□□□□ -0.41
SDH1Q00711 SSA4YER103W 1929 nt12.5□□□□□ -0.41
SDH1Q00711 BDH2YAL061W 1254 nt12.49□□□□□ -0.41
SDH1Q00711 MOT3YMR070W 1473 nt12.47□□□□□ -0.41
SDH1Q00711 YPS1YLR120C 1710 nt12.36□□□□□ -0.43
SDH1Q00711 FUN26YAL022C 1554 nt12.35□□□□□ -0.43
SDH1Q00711 HOM6YJR139C 1080 nt12.35□□□□□ -0.43
SDH1Q00711 YGR021WYGR021W 873 nt12.34□□□□□ -0.43
SDH1Q00711 MNP1YGL068W 585 nt12.33□□□□□ -0.44
SDH1Q00711 MEP2YNL142W 1500 nt12.29□□□□□ -0.44
SDH1Q00711 TRM9YML014W 840 nt12.29□□□□□ -0.44
SDH1Q00711 YFL021C-AYFL021C-A 855 nt12.27□□□□□ -0.45
SDH1Q00711 LSM3YLR438C-A 270 nt12.27□□□□□ -0.45
SDH1Q00711 YDR095CYDR095C 411 nt12.25□□□□□ -0.45
SDH1Q00711 YHR165W-AYHR165W-A 312 nt12.25□□□□□ -0.45
SDH1Q00711 ALF1YNL148C 765 nt12.19□□□□□ -0.46
SDH1Q00711 BDF1YLR399C 2061 nt12.18□□□□□ -0.46
SDH1Q00711 RKM5YLR137W 1104 nt12.16□□□□□ -0.46
SDH1Q00711 DCW1YKL046C 1350 nt12.16□□□□□ -0.46
SDH1Q00711 CCT6YDR188W 1641 nt12.15□□□□□ -0.46
SDH1Q00711 YOR139CYOR139C 393 nt12.08□□□□□ -0.48
SDH1Q00711 SUF2tP(AGG)C 72 nt12.04□□□□□ -0.48
SDH1Q00711 SUF10tP(AGG)N 72 nt12.04□□□□□ -0.48
SDH1Q00711 RPP2AYOL039W 321 nt12.04□□□□□ -0.48
SDH1Q00711 PTP1YDL230W 1008 nt12.03□□□□□ -0.48
SDH1Q00711 SIS1YNL007C 1059 nt12.01□□□□□ -0.49
SDH1Q00711 CAC2YML102W 1407 nt11.98□□□□□ -0.49
SDH1Q00711 NPL3YDR432W 1245 nt11.97□□□□□ -0.49
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms