Protein–RNA interactions for Protein: Q08417

RSB1, Sphingoid long-chain base transporter RSB1, yeastyeast

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSB1Q08417 YML009W-BYML009W-B 477 nt20.75■□□□□ 0.91
RSB1Q08417 NSR1YGR159C 1245 nt20.44■□□□□ 0.86
RSB1Q08417 NOP1YDL014W 984 nt20.26■□□□□ 0.83
RSB1Q08417 YKL036CYKL036C 393 nt18.94■□□□□ 0.62
RSB1Q08417 MDJ1YFL016C 1536 nt17.92■□□□□ 0.46
RSB1Q08417 Q0297Q0297 156 nt17.86■□□□□ 0.45
RSB1Q08417 SRX1YKL086W 384 nt17.73■□□□□ 0.43
RSB1Q08417 YJL027CYJL027C 417 nt17.7■□□□□ 0.42
RSB1Q08417 SCS3YGL126W 1143 nt17.37■□□□□ 0.37
RSB1Q08417 YCR051WYCR051W 669 nt16.82■□□□□ 0.28
RSB1Q08417 YOL085CYOL085C 342 nt16.41■□□□□ 0.22
RSB1Q08417 PKP1YIL042C 1185 nt16.12■□□□□ 0.17
RSB1Q08417 RPP1BYDL130W 321 nt16.01■□□□□ 0.15
RSB1Q08417 DBP2YNL112W 1641 nt15.98■□□□□ 0.15
RSB1Q08417 TRN1tP(UGG)A 72 nt15.9■□□□□ 0.14
RSB1Q08417 SUF9tP(UGG)F 72 nt15.9■□□□□ 0.14
RSB1Q08417 SUF8tP(UGG)H 72 nt15.9■□□□□ 0.14
RSB1Q08417 tP(UGG)LtP(UGG)L 72 nt15.9■□□□□ 0.14
RSB1Q08417 SUF7tP(UGG)M 72 nt15.9■□□□□ 0.14
RSB1Q08417 tP(UGG)N1tP(UGG)N1 72 nt15.9■□□□□ 0.14
RSB1Q08417 tP(UGG)N2tP(UGG)N2 72 nt15.9■□□□□ 0.14
RSB1Q08417 tP(UGG)O1tP(UGG)O1 72 nt15.9■□□□□ 0.14
RSB1Q08417 SUF11tP(UGG)O2 72 nt15.9■□□□□ 0.14
RSB1Q08417 CCC1YLR220W 969 nt15.71■□□□□ 0.11
RSB1Q08417 SCJ1YMR214W 1134 nt15.69■□□□□ 0.1
RSB1Q08417 ATS1YAL020C 1002 nt15.6■□□□□ 0.09
RSB1Q08417 PET122YER153C 765 nt15.28■□□□□ 0.04
RSB1Q08417 YBR190WYBR190W 312 nt15.22■□□□□ 0.03
RSB1Q08417 SCR1SCR1 522 nt15.14■□□□□ 0.01
RSB1Q08417 tP(UGG)O3tP(UGG)O3 72 nt15.11■□□□□ 0.01
RSB1Q08417 RVS167YDR388W 1449 nt15.01□□□□□ -0.01
RSB1Q08417 RTC3YHR087W 336 nt14.86□□□□□ -0.03
RSB1Q08417 RRN5YLR141W 1092 nt14.85□□□□□ -0.03
RSB1Q08417 YDJ1YNL064C 1230 nt14.63□□□□□ -0.07
RSB1Q08417 SHR5YOL110W 714 nt14.59□□□□□ -0.07
RSB1Q08417 RSB1YOR049C 1065 nt14.59□□□□□ -0.07
RSB1Q08417 YER088W-BYER088W-B 147 nt14.57□□□□□ -0.08
RSB1Q08417 PST2YDR032C 597 nt14.43□□□□□ -0.1
RSB1Q08417 SSA3YBL075C 1950 nt14.38□□□□□ -0.11
RSB1Q08417 GAR1YHR089C 618 nt14.24□□□□□ -0.13
RSB1Q08417 DEP1YAL013W 1218 nt14.08□□□□□ -0.16
RSB1Q08417 URN1YPR152C 1398 nt14.02□□□□□ -0.17
RSB1Q08417 PUT4YOR348C 1884 nt13.95□□□□□ -0.18
RSB1Q08417 YKL097CYKL097C 411 nt13.94□□□□□ -0.18
RSB1Q08417 YNL208WYNL208W 600 nt13.89□□□□□ -0.19
RSB1Q08417 RPN10YHR200W 807 nt13.85□□□□□ -0.19
RSB1Q08417 OPI9YLR338W 858 nt13.79□□□□□ -0.2
RSB1Q08417 SHU1YHL006C 453 nt13.78□□□□□ -0.2
RSB1Q08417 TIR1YER011W 765 nt13.77□□□□□ -0.21
RSB1Q08417 SAH1YER043C 1350 nt13.63□□□□□ -0.23
RSB1Q08417 SSA1YAL005C 1929 nt13.56□□□□□ -0.24
RSB1Q08417 ARE1YCR048W 1833 nt13.53□□□□□ -0.24
RSB1Q08417 YAL037C-BYAL037C-B 975 nt13.48□□□□□ -0.25
RSB1Q08417 POA1YBR022W 534 nt13.43□□□□□ -0.26
RSB1Q08417 SRB2YHR041C 633 nt13.42□□□□□ -0.26
RSB1Q08417 YJR018WYJR018W 363 nt13.39□□□□□ -0.27
RSB1Q08417 YOR139CYOR139C 393 nt13.38□□□□□ -0.27
RSB1Q08417 PUN1YLR414C 792 nt13.37□□□□□ -0.27
RSB1Q08417 YHR049C-AYHR049C-A 297 nt13.33□□□□□ -0.28
RSB1Q08417 YJR120WYJR120W 351 nt13.3□□□□□ -0.28
RSB1Q08417 BSC6YOL137W 1494 nt13.26□□□□□ -0.29
RSB1Q08417 WWM1YFL010C 636 nt13.21□□□□□ -0.29
RSB1Q08417 YGR021WYGR021W 873 nt13.19□□□□□ -0.3
RSB1Q08417 HOM6YJR139C 1080 nt13.18□□□□□ -0.3
RSB1Q08417 PTC2YER089C 1395 nt13.17□□□□□ -0.3
RSB1Q08417 RPP2BYDR382W 333 nt13.16□□□□□ -0.3
RSB1Q08417 NPL3YDR432W 1245 nt13.16□□□□□ -0.3
RSB1Q08417 MNP1YGL068W 585 nt13.14□□□□□ -0.31
RSB1Q08417 SPT5YML010W 3192 nt13.12□□□□□ -0.31
RSB1Q08417 YOL037CYOL037C 354 nt13.01□□□□□ -0.33
RSB1Q08417 YFL021C-AYFL021C-A 855 nt12.98□□□□□ -0.33
RSB1Q08417 RKM5YLR137W 1104 nt12.98□□□□□ -0.33
RSB1Q08417 BUD23YCR047C 828 nt12.97□□□□□ -0.33
RSB1Q08417 BDH2YAL061W 1254 nt12.97□□□□□ -0.33
RSB1Q08417 NAB2YGL122C 1578 nt12.96□□□□□ -0.33
RSB1Q08417 SSA4YER103W 1929 nt12.88□□□□□ -0.35
RSB1Q08417 INM2YDR287W 879 nt12.88□□□□□ -0.35
RSB1Q08417 Q0182Q0182 405 nt12.87□□□□□ -0.35
RSB1Q08417 tM(CAU)CtM(CAU)C 72 nt12.85□□□□□ -0.35
RSB1Q08417 IMT4tM(CAU)E 72 nt12.85□□□□□ -0.35
RSB1Q08417 IMT3tM(CAU)J3 72 nt12.85□□□□□ -0.35
RSB1Q08417 IMT1tM(CAU)O1 72 nt12.85□□□□□ -0.35
RSB1Q08417 IMT2tM(CAU)P 72 nt12.85□□□□□ -0.35
RSB1Q08417 LSM3YLR438C-A 270 nt12.85□□□□□ -0.35
RSB1Q08417 DAL1YIR027C 1383 nt12.84□□□□□ -0.35
RSB1Q08417 FIS1YIL065C 468 nt12.83□□□□□ -0.36
RSB1Q08417 YBL100CYBL100C 315 nt12.8□□□□□ -0.36
RSB1Q08417 FPR4YLR449W 1179 nt12.78□□□□□ -0.36
RSB1Q08417 PHO4YFR034C 939 nt12.73□□□□□ -0.37
RSB1Q08417 YLR281CYLR281C 468 nt12.71□□□□□ -0.37
RSB1Q08417 TRM9YML014W 840 nt12.67□□□□□ -0.38
RSB1Q08417 FUN26YAL022C 1554 nt12.67□□□□□ -0.38
RSB1Q08417 PUS2YGL063W 1113 nt12.64□□□□□ -0.39
RSB1Q08417 WHI5YOR083W 888 nt12.62□□□□□ -0.39
RSB1Q08417 CCT6YDR188W 1641 nt12.55□□□□□ -0.4
RSB1Q08417 MEP2YNL142W 1500 nt12.52□□□□□ -0.4
RSB1Q08417 BDF1YLR399C 2061 nt12.47□□□□□ -0.41
RSB1Q08417 YLR154C-GYLR154C-G 150 nt12.43□□□□□ -0.42
RSB1Q08417 MOT3YMR070W 1473 nt12.42□□□□□ -0.42
RSB1Q08417 ALF1YNL148C 765 nt12.4□□□□□ -0.42
Retrieved 100 of 7,029 protein–RNA pairs in 8.2 ms