RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 Chtf8P0CG14 533 aa6.09□□□□□ -1.44
Usp4-209ENSMUST00000194959 NbdyA0A0N4SUI7 68 aa6.08□□□□□ -1.44
Usp4-209ENSMUST00000194959 Krtap14O08640 167 aa6.08□□□□□ -1.44
Usp4-209ENSMUST00000194959 Mrpl55Q9CZ83 127 aa6.08□□□□□ -1.44
Usp4-209ENSMUST00000194959 Dnah7aE9Q0T8 4024 aa6.07□□□□□ -1.44
Usp4-209ENSMUST00000194959 Stard9Q80TF6 4561 aa6.06□□□□□ -1.44
Usp4-209ENSMUST00000194959 Igkv3-3A0A140T8Q0 119 aa6.06□□□□□ -1.44
Usp4-209ENSMUST00000194959 Gpr15lA0A0B4J1N3 78 aa6.05□□□□□ -1.44
Usp4-209ENSMUST00000194959 Znf706Q9D115 76 aaKnown RBP6.05□□□□□ -1.44
Usp4-209ENSMUST00000194959 Gm20604F8WIA3 75 aa6.05□□□□□ -1.44
Usp4-209ENSMUST00000194959 SvipQ3UZP4 77 aa6.05□□□□□ -1.44
Usp4-209ENSMUST00000194959 Ccdc179J3QM76 67 aa6.04□□□□□ -1.44
Usp4-209ENSMUST00000194959 RetnlbQ99P86 105 aa6.02□□□□□ -1.45
Usp4-209ENSMUST00000194959 Gm10160F6Y577 67 aa6□□□□□ -1.45
Usp4-209ENSMUST00000194959 Gm28374F6SG70 93 aa6□□□□□ -1.45
Usp4-209ENSMUST00000194959 Cypt14J3QPF7 87 aa6□□□□□ -1.45
Usp4-209ENSMUST00000194959 Cdc42se1Q8BHL7 80 aa6□□□□□ -1.45
Usp4-209ENSMUST00000194959 Gm2310J3QNJ2 377 aa5.98□□□□□ -1.45
Usp4-209ENSMUST00000194959 Bean1Q9EQG5 255 aa5.98□□□□□ -1.45
Usp4-209ENSMUST00000194959 Dync2h1Q45VK7 4306 aa5.96□□□□□ -1.46
Usp4-209ENSMUST00000194959 Cypt15B1AXS0 87 aa5.96□□□□□ -1.46
Usp4-209ENSMUST00000194959 H2al1aQ5M8Q2 105 aa5.96□□□□□ -1.46
Usp4-209ENSMUST00000194959 Gm16253D3Z167 63 aa5.95□□□□□ -1.46
Usp4-209ENSMUST00000194959 Tnp2P11378 117 aa5.93□□□□□ -1.46
Usp4-209ENSMUST00000194959 H2al1bA0A087WP11 105 aa5.93□□□□□ -1.46
Usp4-209ENSMUST00000194959 Gm10999F6Q4M4 69 aa5.92□□□□□ -1.46
Usp4-209ENSMUST00000194959 H2al1eQ810S6 105 aa5.92□□□□□ -1.46
Usp4-209ENSMUST00000194959 Defb1P56386 69 aa5.9□□□□□ -1.46
Usp4-209ENSMUST00000194959 Lrp1bQ9JI18 4599 aa5.9□□□□□ -1.46
Usp4-209ENSMUST00000194959 Vps13dB1ART2 4390 aa5.9□□□□□ -1.46
Usp4-209ENSMUST00000194959 Gm10337F7DEP7 55 aa5.9□□□□□ -1.46
Usp4-209ENSMUST00000194959 SptssbQ925E8 76 aa5.9□□□□□ -1.47
Usp4-209ENSMUST00000194959 Gm21798J3QNU5 87 aa5.89□□□□□ -1.47
Usp4-209ENSMUST00000194959 Gm20661K7N787 53 aa5.89□□□□□ -1.47
Usp4-209ENSMUST00000194959 Phxr4P15974 95 aa5.86□□□□□ -1.47
Usp4-209ENSMUST00000194959 Ryr3A2AGL3 4863 aa5.85□□□□□ -1.47
Usp4-209ENSMUST00000194959 Hectd4E9Q2E4 4418 aa5.85□□□□□ -1.47
Usp4-209ENSMUST00000194959 Q8BGJ3 129 aa5.85□□□□□ -1.47
Usp4-209ENSMUST00000194959 OxtP35454 125 aa5.83□□□□□ -1.48
Usp4-209ENSMUST00000194959 Pkd1O08852 4293 aa5.8□□□□□ -1.48
Usp4-209ENSMUST00000194959 ApobE9Q414 4505 aa5.78□□□□□ -1.48
Usp4-209ENSMUST00000194959 2310034C09RikQ9D746 214 aa5.75□□□□□ -1.49
Usp4-209ENSMUST00000194959 H2al1kJ3QP08 105 aa5.75□□□□□ -1.49
Usp4-209ENSMUST00000194959 H2al1mQ9DAD9 105 aa5.75□□□□□ -1.49
Usp4-209ENSMUST00000194959 9230102O04RikA2ASX7 82 aa5.74□□□□□ -1.49
Usp4-209ENSMUST00000194959 Ndufs5Q99LY9 106 aa5.73□□□□□ -1.49
Usp4-209ENSMUST00000194959 Lrp1Q91ZX7 4545 aaKnown RBP5.72□□□□□ -1.49
Usp4-209ENSMUST00000194959 Dnah2P0C6F1 4456 aa5.72□□□□□ -1.49
Usp4-209ENSMUST00000194959 Fat1A0A1L1SQU7 4645 aa5.69□□□□□ -1.5
Usp4-209ENSMUST00000194959 Ndufb1P0DN34 57 aa5.68□□□□□ -1.5
Usp4-209ENSMUST00000194959 Vps13bQ80TY5 3993 aa5.67□□□□□ -1.5
Usp4-209ENSMUST00000194959 4933415A04RikQ9D443 101 aa5.65□□□□□ -1.5
Usp4-209ENSMUST00000194959 Sox16Q62247 57 aa5.65□□□□□ -1.5
Usp4-209ENSMUST00000194959 Gm26620Q9CY65 116 aa5.64□□□□□ -1.51
Usp4-209ENSMUST00000194959 Gm4491E0CX42 125 aa5.63□□□□□ -1.51
Usp4-209ENSMUST00000194959 Dync1h1Q9JHU4 4644 aaKnown RBP5.62□□□□□ -1.51
Usp4-209ENSMUST00000194959 Pkhd1E9PZ36 4059 aa5.62□□□□□ -1.51
Usp4-209ENSMUST00000194959 Gm9736A0A1W2P7N1 277 aa5.61□□□□□ -1.51
Usp4-209ENSMUST00000194959 Fat2Q5F226 4351 aa5.59□□□□□ -1.51
Usp4-209ENSMUST00000194959 4930507D05RikQ8C9C9 103 aa5.58□□□□□ -1.52
Usp4-209ENSMUST00000194959 Gm10643Q3URG9 111 aa5.57□□□□□ -1.52
Usp4-209ENSMUST00000194959 Uqcr11Q9CPX8 56 aa5.57□□□□□ -1.52
Usp4-209ENSMUST00000194959 Limd2Q8BGB5 128 aa5.56□□□□□ -1.52
Usp4-209ENSMUST00000194959 Fat3Q8BNA6 4555 aa5.54□□□□□ -1.52
Usp4-209ENSMUST00000194959 Gm3646F6S692 53 aa5.53□□□□□ -1.52
Usp4-209ENSMUST00000194959 Krtap15-1Q9QZU5 150 aa5.52□□□□□ -1.53
Usp4-209ENSMUST00000194959 Mycbp2Q7TPH6 4711 aa5.51□□□□□ -1.53
Usp4-209ENSMUST00000194959 Ryr1E9PZQ0 5035 aa5.51□□□□□ -1.53
Usp4-209ENSMUST00000194959 Pkhd1l1Q80ZA4 4249 aa5.51□□□□□ -1.53
Usp4-209ENSMUST00000194959 2310079G19RikQ9D6L6 185 aa5.51□□□□□ -1.53
Usp4-209ENSMUST00000194959 SacsQ9JLC8 4582 aa5.5□□□□□ -1.53
Usp4-209ENSMUST00000194959 Gm5965D3Z724 196 aa5.5□□□□□ -1.53
Usp4-209ENSMUST00000194959 Gm11939A2A592 99 aa5.49□□□□□ -1.53
Usp4-209ENSMUST00000194959 Krtap3-2Q9D638 99 aa5.49□□□□□ -1.53
Usp4-209ENSMUST00000194959 Krtap3-3Q9D7P0 99 aa5.49□□□□□ -1.53
Usp4-209ENSMUST00000194959 Abca13Q5SSE9 5034 aa5.49□□□□□ -1.53
Usp4-209ENSMUST00000194959 Sec61gP60060 68 aa5.48□□□□□ -1.53
Usp4-209ENSMUST00000194959 D6Ertd527eA0A0N4SWI3 464 aa5.47□□□□□ -1.53
Usp4-209ENSMUST00000194959 Krtap19-5O08632 62 aa5.44□□□□□ -1.54
Usp4-209ENSMUST00000194959 Kmt2cQ8BRH4 4903 aa5.43□□□□□ -1.54
Usp4-209ENSMUST00000194959 Gm5767A0A0J9YTU8 78 aa5.42□□□□□ -1.54
Usp4-209ENSMUST00000194959 Rnase13Q5GAM7 153 aa5.39□□□□□ -1.55
Usp4-209ENSMUST00000194959 A930033H14RikG5E8X6 103 aa5.39□□□□□ -1.55
Usp4-209ENSMUST00000194959 Ryr2E9Q401 4966 aaKnown RBP5.38□□□□□ -1.55
Usp4-209ENSMUST00000194959 Rps29P62274 56 aa5.37□□□□□ -1.55
Usp4-209ENSMUST00000194959 Gm3880A0A1B0GSB3 72 aa5.36□□□□□ -1.55
Usp4-209ENSMUST00000194959 HydinQ80W93 5154 aa5.35□□□□□ -1.55
Usp4-209ENSMUST00000194959 Kiaa1109A2AAE1 5005 aa5.33□□□□□ -1.56
Usp4-209ENSMUST00000194959 1700042G07RikB1AUF7 90 aa5.33□□□□□ -1.56
Usp4-209ENSMUST00000194959 Gm17606F6ZL36 78 aa5.33□□□□□ -1.56
Usp4-209ENSMUST00000194959 Cox6b2Q80ZN9 88 aa5.3□□□□□ -1.56
Usp4-209ENSMUST00000194959 Herc2Q4U2R1 4836 aa5.3□□□□□ -1.56
Usp4-209ENSMUST00000194959 Gm10382Q3V0T5 144 aa5.29□□□□□ -1.56
Usp4-209ENSMUST00000194959 CriptO70333 101 aa5.27□□□□□ -1.57
Usp4-209ENSMUST00000194959 Lrp2A2ARV4 4660 aa5.27□□□□□ -1.57
Usp4-209ENSMUST00000194959 Gm9821Q8K076 103 aa5.25□□□□□ -1.57
Usp4-209ENSMUST00000194959 Gm20537G3UYK7 97 aa5.23□□□□□ -1.57
Usp4-209ENSMUST00000194959 2310057N15RikQ9D6T8 200 aa5.22□□□□□ -1.57
Usp4-209ENSMUST00000194959 Rpl37Q9D823 97 aa5.22□□□□□ -1.57
Usp4-209ENSMUST00000194959 PcloQ9QYX7 5068 aa5.2□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 58.2 ms