RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 NischQ80TM9 1593 aa18.99■□□□□ 0.63
Usp4-209ENSMUST00000194959 Rhox8Q6VSS7 320 aa18.56■□□□□ 0.56
Usp4-209ENSMUST00000194959 Abcc9P70170 1546 aa18.21■□□□□ 0.51
Usp4-209ENSMUST00000194959 Gm35339A0A140LHH9 1649 aa18.04■□□□□ 0.48
Usp4-209ENSMUST00000194959 Abcc8B2RUS7 1588 aa17.89■□□□□ 0.46
Usp4-209ENSMUST00000194959 Ccdc136Q3TVA9 1136 aa17.21■□□□□ 0.35
Usp4-209ENSMUST00000194959 Ehmt2Q9Z148 1263 aaKnown RBP16.96■□□□□ 0.31
Usp4-209ENSMUST00000194959 Rtl1Q7M732 1744 aa16.91■□□□□ 0.3
Usp4-209ENSMUST00000194959 Ccdc180J3QNE4 1664 aa16.86■□□□□ 0.29
Usp4-209ENSMUST00000194959 ScribQ80U72 1612 aa16.65■□□□□ 0.26
Usp4-209ENSMUST00000194959 Rb1cc1Q9ESK9 1588 aa16.63■□□□□ 0.25
Usp4-209ENSMUST00000194959 Trim41Q5NCC3 630 aa16.56■□□□□ 0.24
Usp4-209ENSMUST00000194959 Zcchc6Q5BLK4 1491 aaKnown RBP16.55■□□□□ 0.24
Usp4-209ENSMUST00000194959 Kdm5dQ62240 1548 aa16.48■□□□□ 0.23
Usp4-209ENSMUST00000194959 Cngb1E1AZ71 1325 aa16.43■□□□□ 0.22
Usp4-209ENSMUST00000194959 Dcaf1Q80TR8 1506 aa16.39■□□□□ 0.21
Usp4-209ENSMUST00000194959 HrcG5E8J6 738 aa16.38■□□□□ 0.21
Usp4-209ENSMUST00000194959 Gab3Q8BSM5 595 aa16.36■□□□□ 0.21
Usp4-209ENSMUST00000194959 Baz1aO88379 1555 aa16.32■□□□□ 0.2
Usp4-209ENSMUST00000194959 NacadQ5SWP3 1504 aa16.29■□□□□ 0.2
Usp4-209ENSMUST00000194959 Esf1Q3V1V3 845 aaKnown RBP16.21■□□□□ 0.19
Usp4-209ENSMUST00000194959 Rpgrip1Q9EPQ2 1331 aa16.16■□□□□ 0.18
Usp4-209ENSMUST00000194959 Acin1Q9JIX8 1338 aaKnown RBP16.16■□□□□ 0.18
Usp4-209ENSMUST00000194959 Chic1Q8CBW7 227 aa16.09■□□□□ 0.17
Usp4-209ENSMUST00000194959 Sycp2Q9CUU3 1500 aa15.92■□□□□ 0.14
Usp4-209ENSMUST00000194959 Smarca2Q6DIC0 1577 aa15.88■□□□□ 0.13
Usp4-209ENSMUST00000194959 Cecr2E9Q2Z1 1453 aa15.87■□□□□ 0.13
Usp4-209ENSMUST00000194959 Cep164Q5DU05 1446 aa15.82■□□□□ 0.12
Usp4-209ENSMUST00000194959 Rsf1E9PWW9 1441 aaKnown RBP15.8■□□□□ 0.12
Usp4-209ENSMUST00000194959 Brd4Q9ESU6 1400 aaKnown RBP15.79■□□□□ 0.12
Usp4-209ENSMUST00000194959 Myt1lP97500 1187 aa15.78■□□□□ 0.12
Usp4-209ENSMUST00000194959 Crybg2B7ZCC2 1516 aa15.76■□□□□ 0.11
Usp4-209ENSMUST00000194959 Zeb1Q64318 1117 aa15.72■□□□□ 0.11
Usp4-209ENSMUST00000194959 Ccdc88bQ4QRL3 1481 aa15.72■□□□□ 0.11
Usp4-209ENSMUST00000194959 Pcgf6Q99NA9 353 aa15.65■□□□□ 0.1
Usp4-209ENSMUST00000194959 UbtfP25976 765 aaKnown RBP15.64■□□□□ 0.09
Usp4-209ENSMUST00000194959 Npm2Q80W85 207 aa15.64■□□□□ 0.09
Usp4-209ENSMUST00000194959 Golga3P55937 1487 aa15.61■□□□□ 0.09
Usp4-209ENSMUST00000194959 Synj1Q8CHC4 1574 aa15.6■□□□□ 0.09
Usp4-209ENSMUST00000194959 Il27Q8K3I6 234 aa15.57■□□□□ 0.08
Usp4-209ENSMUST00000194959 BicraF8VPZ9 1578 aa15.56■□□□□ 0.08
Usp4-209ENSMUST00000194959 Supt5hO55201 1082 aaKnown RBP15.55■□□□□ 0.08
Usp4-209ENSMUST00000194959 Mier1Q5UAK0 511 aa15.55■□□□□ 0.08
Usp4-209ENSMUST00000194959 CftrP26361 1476 aa15.51■□□□□ 0.07
Usp4-209ENSMUST00000194959 Ppargc1bQ8VHJ7 1014 aa15.37■□□□□ 0.05
Usp4-209ENSMUST00000194959 Ap3b1Q9Z1T1 1105 aa15.37■□□□□ 0.05
Usp4-209ENSMUST00000194959 Plekhg3Q4VAC9 1341 aa15.35■□□□□ 0.05
Usp4-209ENSMUST00000194959 Wdr66E9Q743 1299 aa15.32■□□□□ 0.04
Usp4-209ENSMUST00000194959 NefmP08553 848 aa15.29■□□□□ 0.04
Usp4-209ENSMUST00000194959 Smarca4Q3TKT4 1613 aaKnown RBP15.25■□□□□ 0.03
Usp4-209ENSMUST00000194959 Cc2d2aQ8CFW7 1633 aa15.23■□□□□ 0.03
Usp4-209ENSMUST00000194959 Cttnbp2B9EJA2 1648 aa15.23■□□□□ 0.03
Usp4-209ENSMUST00000194959 Las1lA2BE28 776 aaKnown RBP15.17■□□□□ 0.02
Usp4-209ENSMUST00000194959 Sall2Q9QX96 1004 aa15.15■□□□□ 0.02
Usp4-209ENSMUST00000194959 Rapgef2Q8CHG7 1496 aa15.13■□□□□ 0.01
Usp4-209ENSMUST00000194959 Clip1Q922J3 1391 aa15.13■□□□□ 0.01
Usp4-209ENSMUST00000194959 Top2bQ64511 1612 aa15.12■□□□□ 0.01
Usp4-209ENSMUST00000194959 Fmn1Q05860 1466 aa15.12■□□□□ 0.01
Usp4-209ENSMUST00000194959 Iqgap2Q3UQ44 1575 aa15.11■□□□□ 0.01
Usp4-209ENSMUST00000194959 Cep162Q6ZQ06 1403 aa15.1■□□□□ 0.01
Usp4-209ENSMUST00000194959 Kif15Q6P9L6 1387 aa15.06■□□□□ 0
Usp4-209ENSMUST00000194959 Eid3Q3V124 375 aa15.05■□□□□ -0
Usp4-209ENSMUST00000194959 Aebp2Q9Z248 504 aaKnown RBP15.05■□□□□ -0
Usp4-209ENSMUST00000194959 Atad2bE9Q166 1460 aaKnown RBP15.04■□□□□ -0
Usp4-209ENSMUST00000194959 Lmod2Q3UHZ5 550 aa15.03■□□□□ -0
Usp4-209ENSMUST00000194959 Neurod1Q60867 357 aa15.01□□□□□ -0.01
Usp4-209ENSMUST00000194959 Pds5bQ4VA53 1446 aaKnown RBP15□□□□□ -0.01
Usp4-209ENSMUST00000194959 Ubl4bQ9CQ84 188 aa14.98□□□□□ -0.01
Usp4-209ENSMUST00000194959 Npm1Q61937 292 aaKnown RBP14.97□□□□□ -0.01
Usp4-209ENSMUST00000194959 Top2aQ01320 1528 aaKnown RBP14.96□□□□□ -0.01
Usp4-209ENSMUST00000194959 Fam50aQ9WV03 339 aaKnown RBP14.95□□□□□ -0.02
Usp4-209ENSMUST00000194959 TonslQ6NZL6 1363 aa14.93□□□□□ -0.02
Usp4-209ENSMUST00000194959 PtprkP35822 1457 aa14.89□□□□□ -0.03
Usp4-209ENSMUST00000194959 Setd5Q5XJV7 1441 aa14.88□□□□□ -0.03
Usp4-209ENSMUST00000194959 Ube2uB1AUC4 352 aa14.88□□□□□ -0.03
Usp4-209ENSMUST00000194959 Frmpd1A2AKB4 1549 aa14.87□□□□□ -0.03
Usp4-209ENSMUST00000194959 Mapk8ip2Q9ERE9 830 aa14.85□□□□□ -0.03
Usp4-209ENSMUST00000194959 Ercc6F8VPZ5 1481 aa14.84□□□□□ -0.03
Usp4-209ENSMUST00000194959 BlmO88700 1416 aa14.79□□□□□ -0.04
Usp4-209ENSMUST00000194959 Eea1Q8BL66 1411 aa14.79□□□□□ -0.04
Usp4-209ENSMUST00000194959 Arhgap35Q91YM2 1499 aa14.75□□□□□ -0.05
Usp4-209ENSMUST00000194959 Nop58Q6DFW4 536 aaKnown RBP14.75□□□□□ -0.05
Usp4-209ENSMUST00000194959 ClspnQ80YR7 1315 aa14.73□□□□□ -0.05
Usp4-209ENSMUST00000194959 Ccdc18Q640L5 1455 aa14.73□□□□□ -0.05
Usp4-209ENSMUST00000194959 Wdr62Q3U3T8 1523 aa14.72□□□□□ -0.05
Usp4-209ENSMUST00000194959 Cux2P70298 1426 aa14.72□□□□□ -0.05
Usp4-209ENSMUST00000194959 Cdk11bP24788 784 aaKnown RBP14.72□□□□□ -0.05
Usp4-209ENSMUST00000194959 Baz1bQ9Z277 1479 aa14.69□□□□□ -0.06
Usp4-209ENSMUST00000194959 Arap1Q4LDD4 1452 aa14.67□□□□□ -0.06
Usp4-209ENSMUST00000194959 NclP09405 707 aaKnown RBP14.66□□□□□ -0.06
Usp4-209ENSMUST00000194959 Chic2Q9D9G3 165 aa14.64□□□□□ -0.07
Usp4-209ENSMUST00000194959 Phldb1Q6PDH0 1371 aaKnown RBP14.62□□□□□ -0.07
Usp4-209ENSMUST00000194959 Shroom4Q1W617 1475 aa14.62□□□□□ -0.07
Usp4-209ENSMUST00000194959 Csrnp3P59055 597 aa14.6□□□□□ -0.07
Usp4-209ENSMUST00000194959 Camsap1A2AHC3 1581 aa14.58□□□□□ -0.08
Usp4-209ENSMUST00000194959 Lamc3Q9R0B6 1581 aa14.58□□□□□ -0.08
Usp4-209ENSMUST00000194959 Gm38655A0A286YDK6 273 aa14.57□□□□□ -0.08
Usp4-209ENSMUST00000194959 TnnQ80Z71 1560 aa14.56□□□□□ -0.08
Usp4-209ENSMUST00000194959 NrkQ9R0G8 1455 aa14.56□□□□□ -0.08
Usp4-209ENSMUST00000194959 Grin2bQ01097 1482 aa14.56□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 164.1 ms