RNA–Protein interactions for RNA: ENSMUST00000125541.1

Trnp1-202, Transcript of TMF-regulated nuclear protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trnp1, Length 1,654 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1-202ENSMUST00000125541 Kiaa1109A2AAE1 5005 aa18.05■□□□□ 0.48
Trnp1-202ENSMUST00000125541 Krtap19-5O08632 62 aa17.99■□□□□ 0.47
Trnp1-202ENSMUST00000125541 Abca13Q5SSE9 5034 aa17.94■□□□□ 0.46
Trnp1-202ENSMUST00000125541 Fam229bQ8CF36 80 aa17.93■□□□□ 0.46
Trnp1-202ENSMUST00000125541 Gm2310J3QNJ2 377 aa17.92■□□□□ 0.46
Trnp1-202ENSMUST00000125541 Rps29P62274 56 aa17.89■□□□□ 0.45
Trnp1-202ENSMUST00000125541 7530416G11RikJ3QJX6 159 aa17.87■□□□□ 0.45
Trnp1-202ENSMUST00000125541 Defa21Q8C1P2 93 aa17.87■□□□□ 0.45
Trnp1-202ENSMUST00000125541 Fat3Q8BNA6 4555 aa17.86■□□□□ 0.45
Trnp1-202ENSMUST00000125541 Dnhd1D3Z2X2 4750 aa17.85■□□□□ 0.45
Trnp1-202ENSMUST00000125541 Igkv3-3A0A140T8Q0 119 aa17.85■□□□□ 0.45
Trnp1-202ENSMUST00000125541 4930518I15RikQ3V2W7 57 aa17.82■□□□□ 0.44
Trnp1-202ENSMUST00000125541 Serp2Q6TAW2 65 aa17.82■□□□□ 0.44
Trnp1-202ENSMUST00000125541 Cypt15B1AXS0 87 aa17.8■□□□□ 0.44
Trnp1-202ENSMUST00000125541 Samd13D3YUG0 102 aa17.8■□□□□ 0.44
Trnp1-202ENSMUST00000125541 A0A286YE49 62 aa17.78■□□□□ 0.44
Trnp1-202ENSMUST00000125541 Lce1mQ9CR91 182 aa17.78■□□□□ 0.44
Trnp1-202ENSMUST00000125541 Spink8Q09TK9 105 aa17.77■□□□□ 0.43
Trnp1-202ENSMUST00000125541 HydinQ80W93 5154 aa17.72■□□□□ 0.43
Trnp1-202ENSMUST00000125541 Naa38Q9D2U5 125 aa17.71■□□□□ 0.43
Trnp1-202ENSMUST00000125541 Lrp1Q91ZX7 4545 aaKnown RBP17.69■□□□□ 0.42
Trnp1-202ENSMUST00000125541 PcloQ9QYX7 5068 aa17.67■□□□□ 0.42
Trnp1-202ENSMUST00000125541 D6Ertd527eA0A0N4SWI3 464 aa17.64■□□□□ 0.42
Trnp1-202ENSMUST00000125541 GhrhP16043 103 aa17.64■□□□□ 0.41
Trnp1-202ENSMUST00000125541 BikO70337 150 aa17.58■□□□□ 0.4
Trnp1-202ENSMUST00000125541 A530084C06RikQ3UTW2 186 aa17.52■□□□□ 0.39
Trnp1-202ENSMUST00000125541 Mycbp2Q7TPH6 4711 aa17.51■□□□□ 0.39
Trnp1-202ENSMUST00000125541 Apoc4Q61268 124 aa17.51■□□□□ 0.39
Trnp1-202ENSMUST00000125541 B230307C23RikQ8BLB2 64 aa17.48■□□□□ 0.39
Trnp1-202ENSMUST00000125541 Defb13Q8R2I4 64 aa17.47■□□□□ 0.39
Trnp1-202ENSMUST00000125541 1700074P13RikQ9D9G7 251 aa17.45■□□□□ 0.38
Trnp1-202ENSMUST00000125541 Prr13Q9CQJ5 137 aa17.44■□□□□ 0.38
Trnp1-202ENSMUST00000125541 Gm26620Q9CY65 116 aa17.38■□□□□ 0.37
Trnp1-202ENSMUST00000125541 Gm10267M0QWD8 85 aa17.36■□□□□ 0.37
Trnp1-202ENSMUST00000125541 Atox1O08997 68 aaKnown RBP17.29■□□□□ 0.36
Trnp1-202ENSMUST00000125541 Gm11939A2A592 99 aa17.28■□□□□ 0.36
Trnp1-202ENSMUST00000125541 Coa6Q8BGD8 79 aa17.27■□□□□ 0.36
Trnp1-202ENSMUST00000125541 Scgb1b2O35176 93 aa17.24■□□□□ 0.35
Trnp1-202ENSMUST00000125541 Gm18596A0A1W2P860 280 aa17.21■□□□□ 0.35
Trnp1-202ENSMUST00000125541 Gm9736A0A1W2P7N1 277 aa17.2■□□□□ 0.34
Trnp1-202ENSMUST00000125541 Spint4Q9D263 159 aa17.2■□□□□ 0.34
Trnp1-202ENSMUST00000125541 Herc1E9PZP8 4859 aa17.19■□□□□ 0.34
Trnp1-202ENSMUST00000125541 Gm28539A0A087WSL9 92 aa17.08■□□□□ 0.32
Trnp1-202ENSMUST00000125541 Gm5767A0A0J9YTU8 78 aa17.08■□□□□ 0.32
Trnp1-202ENSMUST00000125541 Smlr1J3QMJ4 66 aa17.07■□□□□ 0.32
Trnp1-202ENSMUST00000125541 Tmem258P61166 79 aa17.07■□□□□ 0.32
Trnp1-202ENSMUST00000125541 Lrp2A2ARV4 4660 aa17.05■□□□□ 0.32
Trnp1-202ENSMUST00000125541 Chtf8P0CG14 533 aa17■□□□□ 0.31
Trnp1-202ENSMUST00000125541 Krtap3-2Q9D638 99 aa16.97■□□□□ 0.31
Trnp1-202ENSMUST00000125541 Krtap3-3Q9D7P0 99 aa16.97■□□□□ 0.31
Trnp1-202ENSMUST00000125541 Gm19935A0A1B0GSF9 52 aa16.96■□□□□ 0.31
Trnp1-202ENSMUST00000125541 Gm5965D3Z724 196 aa16.93■□□□□ 0.3
Trnp1-202ENSMUST00000125541 Gm10160F6Y577 67 aa16.88■□□□□ 0.29
Trnp1-202ENSMUST00000125541 SmcpP15265 143 aa16.88■□□□□ 0.29
Trnp1-202ENSMUST00000125541 Pet100P0DJE0 76 aa16.8■□□□□ 0.28
Trnp1-202ENSMUST00000125541 Coa5Q99M07 74 aa16.8■□□□□ 0.28
Trnp1-202ENSMUST00000125541 Defb38Q7TNV7 63 aa16.75■□□□□ 0.27
Trnp1-202ENSMUST00000125541 Gm10643Q3URG9 111 aa16.72■□□□□ 0.27
Trnp1-202ENSMUST00000125541 SnurfQ9WU12 71 aa16.71■□□□□ 0.27
Trnp1-202ENSMUST00000125541 A930033H14RikG5E8X6 103 aa16.69■□□□□ 0.26
Trnp1-202ENSMUST00000125541 Gm10999F6Q4M4 69 aa16.65■□□□□ 0.26
Trnp1-202ENSMUST00000125541 Q8BGJ3 129 aa16.64■□□□□ 0.25
Trnp1-202ENSMUST00000125541 Gm4491E0CX42 125 aa16.63■□□□□ 0.25
Trnp1-202ENSMUST00000125541 Gm21798J3QNU5 87 aa16.63■□□□□ 0.25
Trnp1-202ENSMUST00000125541 Rpl37Q9D823 97 aa16.63■□□□□ 0.25
Trnp1-202ENSMUST00000125541 Gm9821Q8K076 103 aa16.62■□□□□ 0.25
Trnp1-202ENSMUST00000125541 Krtap15-1Q9QZU5 150 aa16.59■□□□□ 0.25
Trnp1-202ENSMUST00000125541 Smim20D3Z7Q2 69 aa16.57■□□□□ 0.24
Trnp1-202ENSMUST00000125541 Rps28P62858 69 aaKnown RBP16.56■□□□□ 0.24
Trnp1-202ENSMUST00000125541 Serp1Q9Z1W5 66 aa16.53■□□□□ 0.24
Trnp1-202ENSMUST00000125541 Cdc42se1Q8BHL7 80 aa16.51■□□□□ 0.23
Trnp1-202ENSMUST00000125541 2310034C09RikQ9D746 214 aa16.51■□□□□ 0.23
Trnp1-202ENSMUST00000125541 Pcp4P63054 62 aa16.46■□□□□ 0.23
Trnp1-202ENSMUST00000125541 Prm1P02319 51 aa16.46■□□□□ 0.23
Trnp1-202ENSMUST00000125541 4930507D05RikQ8C9C9 103 aa16.45■□□□□ 0.22
Trnp1-202ENSMUST00000125541 Ush2AQ2QI47 5193 aa16.44■□□□□ 0.22
Trnp1-202ENSMUST00000125541 2310079G19RikQ9D6L6 185 aa16.43■□□□□ 0.22
Trnp1-202ENSMUST00000125541 Rnase13Q5GAM7 153 aa16.41■□□□□ 0.22
Trnp1-202ENSMUST00000125541 Gm7735D3YX18 52 aa16.39■□□□□ 0.21
Trnp1-202ENSMUST00000125541 Brk1Q91VR8 75 aa16.37■□□□□ 0.21
Trnp1-202ENSMUST00000125541 9230102O04RikA2ASX7 82 aa16.37■□□□□ 0.21
Trnp1-202ENSMUST00000125541 Gm9789Q8BIG3 52 aa16.3■□□□□ 0.2
Trnp1-202ENSMUST00000125541 Gm10197F6QEY5 67 aa16.21■□□□□ 0.19
Trnp1-202ENSMUST00000125541 Hmcn2A2AJ76 5100 aa16.16■□□□□ 0.18
Trnp1-202ENSMUST00000125541 Gm17416Q30KP4 66 aa16.15■□□□□ 0.18
Trnp1-202ENSMUST00000125541 Sec61bQ9CQS8 96 aaKnown RBP16.12■□□□□ 0.17
Trnp1-202ENSMUST00000125541 Gm20661K7N787 53 aa16.08■□□□□ 0.17
Trnp1-202ENSMUST00000125541 Phxr4P15974 95 aa16.08■□□□□ 0.16
Trnp1-202ENSMUST00000125541 4932415D10RikA0A1W2P6U8 4986 aa16.07■□□□□ 0.16
Trnp1-202ENSMUST00000125541 Ubr4A2AN08 5180 aa16.06■□□□□ 0.16
Trnp1-202ENSMUST00000125541 SptssbQ925E8 76 aa16.03■□□□□ 0.16
Trnp1-202ENSMUST00000125541 H2al1aQ5M8Q2 105 aa15.99■□□□□ 0.15
Trnp1-202ENSMUST00000125541 H2al1eQ810S6 105 aa15.99■□□□□ 0.15
Trnp1-202ENSMUST00000125541 Defb1P56386 69 aa15.92■□□□□ 0.14
Trnp1-202ENSMUST00000125541 Uqcr11Q9CPX8 56 aa15.79■□□□□ 0.12
Trnp1-202ENSMUST00000125541 2310057N15RikQ9D6T8 200 aa15.79■□□□□ 0.12
Trnp1-202ENSMUST00000125541 H2al1bA0A087WP11 105 aa15.76■□□□□ 0.11
Trnp1-202ENSMUST00000125541 Cox6b2Q80ZN9 88 aa15.73■□□□□ 0.11
Trnp1-202ENSMUST00000125541 Limd2Q8BGB5 128 aa15.73■□□□□ 0.11
Trnp1-202ENSMUST00000125541 Ndufb1P0DN34 57 aa15.7■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms