RNA–Protein interactions for RNA: ENSMUST00000057525.13

Trim3-201, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 3,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-201ENSMUST00000057525 Mycbp2Q7TPH6 4711 aa8.91□□□□□ -0.98
Trim3-201ENSMUST00000057525 Defa21Q8C1P2 93 aa8.9□□□□□ -0.98
Trim3-201ENSMUST00000057525 Cystm1Q8K353 104 aa8.9□□□□□ -0.99
Trim3-201ENSMUST00000057525 Gm37013Q8K491 104 aa8.87□□□□□ -0.99
Trim3-201ENSMUST00000057525 Gm16253D3Z167 63 aa8.86□□□□□ -0.99
Trim3-201ENSMUST00000057525 Prr15lQ8JZM2 100 aa8.86□□□□□ -0.99
Trim3-201ENSMUST00000057525 Fam229bQ8CF36 80 aa8.86□□□□□ -0.99
Trim3-201ENSMUST00000057525 Defb12Q8K4N3 78 aa8.86□□□□□ -0.99
Trim3-201ENSMUST00000057525 Gm28539A0A087WSL9 92 aa8.85□□□□□ -0.99
Trim3-201ENSMUST00000057525 Igkv8-19A0A0G2JFN8 121 aa8.84□□□□□ -0.99
Trim3-201ENSMUST00000057525 Birc6O88738 4882 aa8.84□□□□□ -0.99
Trim3-201ENSMUST00000057525 Prr13Q9CQJ5 137 aa8.84□□□□□ -0.99
Trim3-201ENSMUST00000057525 PcloQ9QYX7 5068 aa8.84□□□□□ -0.99
Trim3-201ENSMUST00000057525 Gm9736A0A1W2P7N1 277 aa8.82□□□□□ -1
Trim3-201ENSMUST00000057525 Anapc13Q8R034 74 aa8.81□□□□□ -1
Trim3-201ENSMUST00000057525 Gm20604F8WIA3 75 aa8.78□□□□□ -1
Trim3-201ENSMUST00000057525 Naa38Q9D2U5 125 aa8.76□□□□□ -1.01
Trim3-201ENSMUST00000057525 Spink8Q09TK9 105 aa8.73□□□□□ -1.01
Trim3-201ENSMUST00000057525 Dnhd1D3Z2X2 4750 aa8.72□□□□□ -1.01
Trim3-201ENSMUST00000057525 Sec61gP60060 68 aa8.72□□□□□ -1.01
Trim3-201ENSMUST00000057525 Atp5eP56382 52 aa8.71□□□□□ -1.01
Trim3-201ENSMUST00000057525 Cypt15B1AXS0 87 aa8.69□□□□□ -1.02
Trim3-201ENSMUST00000057525 Samd13D3YUG0 102 aa8.67□□□□□ -1.02
Trim3-201ENSMUST00000057525 Lrp2A2ARV4 4660 aa8.67□□□□□ -1.02
Trim3-201ENSMUST00000057525 Gm2310J3QNJ2 377 aa8.66□□□□□ -1.02
Trim3-201ENSMUST00000057525 A530084C06RikQ3UTW2 186 aa8.65□□□□□ -1.02
Trim3-201ENSMUST00000057525 7530416G11RikJ3QJX6 159 aa8.65□□□□□ -1.02
Trim3-201ENSMUST00000057525 Gm10267M0QWD8 85 aa8.64□□□□□ -1.03
Trim3-201ENSMUST00000057525 SmcpP15265 143 aa8.62□□□□□ -1.03
Trim3-201ENSMUST00000057525 Igkv3-3A0A140T8Q0 119 aa8.62□□□□□ -1.03
Trim3-201ENSMUST00000057525 D6Ertd527eA0A0N4SWI3 464 aa8.6□□□□□ -1.03
Trim3-201ENSMUST00000057525 A0A286YE49 62 aa8.6□□□□□ -1.03
Trim3-201ENSMUST00000057525 Defb13Q8R2I4 64 aa8.58□□□□□ -1.04
Trim3-201ENSMUST00000057525 4930518I15RikQ3V2W7 57 aa8.57□□□□□ -1.04
Trim3-201ENSMUST00000057525 Gm5965D3Z724 196 aa8.54□□□□□ -1.04
Trim3-201ENSMUST00000057525 1700074P13RikQ9D9G7 251 aa8.54□□□□□ -1.04
Trim3-201ENSMUST00000057525 BikO70337 150 aa8.52□□□□□ -1.05
Trim3-201ENSMUST00000057525 B230307C23RikQ8BLB2 64 aa8.52□□□□□ -1.05
Trim3-201ENSMUST00000057525 Ndufc1Q9CQY9 76 aa8.52□□□□□ -1.05
Trim3-201ENSMUST00000057525 Herc1E9PZP8 4859 aa8.51□□□□□ -1.05
Trim3-201ENSMUST00000057525 Serp2Q6TAW2 65 aa8.5□□□□□ -1.05
Trim3-201ENSMUST00000057525 Rps29P62274 56 aa8.49□□□□□ -1.05
Trim3-201ENSMUST00000057525 Gm11939A2A592 99 aa8.48□□□□□ -1.05
Trim3-201ENSMUST00000057525 Defb38Q7TNV7 63 aa8.46□□□□□ -1.06
Trim3-201ENSMUST00000057525 Apoc4Q61268 124 aa8.45□□□□□ -1.06
Trim3-201ENSMUST00000057525 Gm26620Q9CY65 116 aa8.42□□□□□ -1.06
Trim3-201ENSMUST00000057525 Gm5767A0A0J9YTU8 78 aa8.34□□□□□ -1.07
Trim3-201ENSMUST00000057525 GhrhP16043 103 aa8.33□□□□□ -1.08
Trim3-201ENSMUST00000057525 Krtap15-1Q9QZU5 150 aa8.32□□□□□ -1.08
Trim3-201ENSMUST00000057525 Lce1mQ9CR91 182 aa8.32□□□□□ -1.08
Trim3-201ENSMUST00000057525 Gm10337F7DEP7 55 aa8.31□□□□□ -1.08
Trim3-201ENSMUST00000057525 Chtf8P0CG14 533 aa8.29□□□□□ -1.08
Trim3-201ENSMUST00000057525 Coa6Q8BGD8 79 aa8.29□□□□□ -1.08
Trim3-201ENSMUST00000057525 Atox1O08997 68 aaKnown RBP8.28□□□□□ -1.08
Trim3-201ENSMUST00000057525 Spint4Q9D263 159 aa8.25□□□□□ -1.09
Trim3-201ENSMUST00000057525 H2al1aQ5M8Q2 105 aa8.25□□□□□ -1.09
Trim3-201ENSMUST00000057525 Krtap3-2Q9D638 99 aa8.25□□□□□ -1.09
Trim3-201ENSMUST00000057525 Krtap3-3Q9D7P0 99 aa8.25□□□□□ -1.09
Trim3-201ENSMUST00000057525 Gm10999F6Q4M4 69 aa8.22□□□□□ -1.09
Trim3-201ENSMUST00000057525 9230102O04RikA2ASX7 82 aa8.21□□□□□ -1.09
Trim3-201ENSMUST00000057525 Rps28P62858 69 aaKnown RBP8.2□□□□□ -1.1
Trim3-201ENSMUST00000057525 Q8BGJ3 129 aa8.19□□□□□ -1.1
Trim3-201ENSMUST00000057525 SnurfQ9WU12 71 aa8.18□□□□□ -1.1
Trim3-201ENSMUST00000057525 Gm21798J3QNU5 87 aa8.16□□□□□ -1.1
Trim3-201ENSMUST00000057525 Gm4491E0CX42 125 aa8.15□□□□□ -1.1
Trim3-201ENSMUST00000057525 Gm10160F6Y577 67 aa8.15□□□□□ -1.1
Trim3-201ENSMUST00000057525 Gm9821Q8K076 103 aa8.15□□□□□ -1.11
Trim3-201ENSMUST00000057525 H2al1bA0A087WP11 105 aa8.13□□□□□ -1.11
Trim3-201ENSMUST00000057525 H2al1kJ3QP08 105 aa8.13□□□□□ -1.11
Trim3-201ENSMUST00000057525 H2al1eQ810S6 105 aa8.13□□□□□ -1.11
Trim3-201ENSMUST00000057525 H2al1mQ9DAD9 105 aa8.13□□□□□ -1.11
Trim3-201ENSMUST00000057525 Coa5Q99M07 74 aa8.11□□□□□ -1.11
Trim3-201ENSMUST00000057525 A930033H14RikG5E8X6 103 aa8.1□□□□□ -1.11
Trim3-201ENSMUST00000057525 Rpl37Q9D823 97 aa8.09□□□□□ -1.11
Trim3-201ENSMUST00000057525 2310057N15RikQ9D6T8 200 aa8.09□□□□□ -1.11
Trim3-201ENSMUST00000057525 Gm18596A0A1W2P860 280 aa8.08□□□□□ -1.12
Trim3-201ENSMUST00000057525 Ush2AQ2QI47 5193 aa8.06□□□□□ -1.12
Trim3-201ENSMUST00000057525 2310034C09RikQ9D746 214 aa8.06□□□□□ -1.12
Trim3-201ENSMUST00000057525 Tmem258P61166 79 aa8.05□□□□□ -1.12
Trim3-201ENSMUST00000057525 Rnase13Q5GAM7 153 aa8.03□□□□□ -1.12
Trim3-201ENSMUST00000057525 Ubr4A2AN08 5180 aa8.02□□□□□ -1.13
Trim3-201ENSMUST00000057525 Pet100P0DJE0 76 aa8.02□□□□□ -1.13
Trim3-201ENSMUST00000057525 Sox16Q62247 57 aa8□□□□□ -1.13
Trim3-201ENSMUST00000057525 Defb1P56386 69 aa8□□□□□ -1.13
Trim3-201ENSMUST00000057525 Brk1Q91VR8 75 aa7.97□□□□□ -1.13
Trim3-201ENSMUST00000057525 Gm19935A0A1B0GSF9 52 aa7.96□□□□□ -1.13
Trim3-201ENSMUST00000057525 2310079G19RikQ9D6L6 185 aa7.95□□□□□ -1.14
Trim3-201ENSMUST00000057525 Hmcn2A2AJ76 5100 aa7.94□□□□□ -1.14
Trim3-201ENSMUST00000057525 Crct1Q6PAI5 102 aa7.91□□□□□ -1.14
Trim3-201ENSMUST00000057525 4930507D05RikQ8C9C9 103 aa7.9□□□□□ -1.14
Trim3-201ENSMUST00000057525 Gm10197F6QEY5 67 aa7.86□□□□□ -1.15
Trim3-201ENSMUST00000057525 Gm10318A0A1W2P728 225 aa7.84□□□□□ -1.15
Trim3-201ENSMUST00000057525 Cdc42se1Q8BHL7 80 aa7.84□□□□□ -1.15
Trim3-201ENSMUST00000057525 Sec61bQ9CQS8 96 aaKnown RBP7.84□□□□□ -1.15
Trim3-201ENSMUST00000057525 Gm10643Q3URG9 111 aa7.81□□□□□ -1.16
Trim3-201ENSMUST00000057525 Serp1Q9Z1W5 66 aa7.81□□□□□ -1.16
Trim3-201ENSMUST00000057525 Gm20661K7N787 53 aa7.8□□□□□ -1.16
Trim3-201ENSMUST00000057525 4932415D10RikA0A1W2P6U8 4986 aa7.77□□□□□ -1.17
Trim3-201ENSMUST00000057525 Gm17416Q30KP4 66 aa7.73□□□□□ -1.17
Trim3-201ENSMUST00000057525 ZanO88799 5376 aa7.73□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 147.8 ms