RNA–Protein interactions for RNA: ENSMUST00000057525.13

Trim3-201, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 3,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-201ENSMUST00000057525 NischQ80TM9 1593 aa32.03■■■□□ 2.72
Trim3-201ENSMUST00000057525 Gm35339A0A140LHH9 1649 aa31.74■■■□□ 2.67
Trim3-201ENSMUST00000057525 Abcc9P70170 1546 aa30.96■■■□□ 2.55
Trim3-201ENSMUST00000057525 Abcc8B2RUS7 1588 aa30.65■■■□□ 2.5
Trim3-201ENSMUST00000057525 ScribQ80U72 1612 aa29.12■■■□□ 2.25
Trim3-201ENSMUST00000057525 Rhox8Q6VSS7 320 aa29■■■□□ 2.23
Trim3-201ENSMUST00000057525 Kdm5dQ62240 1548 aa28.37■■■□□ 2.13
Trim3-201ENSMUST00000057525 NacadQ5SWP3 1504 aa28.21■■■□□ 2.11
Trim3-201ENSMUST00000057525 Dcaf1Q80TR8 1506 aa28.19■■■□□ 2.1
Trim3-201ENSMUST00000057525 Rb1cc1Q9ESK9 1588 aa28■■■□□ 2.07
Trim3-201ENSMUST00000057525 Sycp2Q9CUU3 1500 aa27.64■■■□□ 2.02
Trim3-201ENSMUST00000057525 Baz1aO88379 1555 aa27.57■■■□□ 2
Trim3-201ENSMUST00000057525 Zcchc6Q5BLK4 1491 aaKnown RBP27.32■■□□□ 1.96
Trim3-201ENSMUST00000057525 Ccdc180J3QNE4 1664 aa27.31■■□□□ 1.96
Trim3-201ENSMUST00000057525 BicraF8VPZ9 1578 aa27.2■■□□□ 1.95
Trim3-201ENSMUST00000057525 Crybg2B7ZCC2 1516 aa27.11■■□□□ 1.93
Trim3-201ENSMUST00000057525 Rtl1Q7M732 1744 aa27.09■■□□□ 1.93
Trim3-201ENSMUST00000057525 Ccdc136Q3TVA9 1136 aa27.07■■□□□ 1.92
Trim3-201ENSMUST00000057525 Smarca2Q6DIC0 1577 aa26.84■■□□□ 1.89
Trim3-201ENSMUST00000057525 Cecr2E9Q2Z1 1453 aa26.67■■□□□ 1.86
Trim3-201ENSMUST00000057525 Trim41Q5NCC3 630 aa26.31■■□□□ 1.8
Trim3-201ENSMUST00000057525 Smarca4Q3TKT4 1613 aaKnown RBP26.24■■□□□ 1.79
Trim3-201ENSMUST00000057525 Brd4Q9ESU6 1400 aaKnown RBP26.19■■□□□ 1.78
Trim3-201ENSMUST00000057525 Pds5bQ4VA53 1446 aaKnown RBP26.17■■□□□ 1.78
Trim3-201ENSMUST00000057525 Synj1Q8CHC4 1574 aa26.15■■□□□ 1.78
Trim3-201ENSMUST00000057525 Atad2bE9Q166 1460 aaKnown RBP26.11■■□□□ 1.77
Trim3-201ENSMUST00000057525 CftrP26361 1476 aa26.07■■□□□ 1.76
Trim3-201ENSMUST00000057525 Iqgap2Q3UQ44 1575 aa26.04■■□□□ 1.76
Trim3-201ENSMUST00000057525 Esf1Q3V1V3 845 aaKnown RBP26.03■■□□□ 1.76
Trim3-201ENSMUST00000057525 Cngb1E1AZ71 1325 aa25.93■■□□□ 1.74
Trim3-201ENSMUST00000057525 Cttnbp2B9EJA2 1648 aa25.9■■□□□ 1.74
Trim3-201ENSMUST00000057525 Ercc6F8VPZ5 1481 aa25.71■■□□□ 1.71
Trim3-201ENSMUST00000057525 Frmpd1A2AKB4 1549 aa25.69■■□□□ 1.7
Trim3-201ENSMUST00000057525 Dnajc5bQ9CQ94 199 aa25.65■■□□□ 1.7
Trim3-201ENSMUST00000057525 Wdr62Q3U3T8 1523 aa25.63■■□□□ 1.69
Trim3-201ENSMUST00000057525 Golga3P55937 1487 aa25.62■■□□□ 1.69
Trim3-201ENSMUST00000057525 Thoc2B1AZI6 1594 aaKnown RBP25.6■■□□□ 1.69
Trim3-201ENSMUST00000057525 HrcG5E8J6 738 aa25.48■■□□□ 1.67
Trim3-201ENSMUST00000057525 Chic1Q8CBW7 227 aa25.45■■□□□ 1.66
Trim3-201ENSMUST00000057525 Cc2d2aQ8CFW7 1633 aa25.41■■□□□ 1.66
Trim3-201ENSMUST00000057525 Rsf1E9PWW9 1441 aaKnown RBP25.38■■□□□ 1.65
Trim3-201ENSMUST00000057525 Top2bQ64511 1612 aa25.38■■□□□ 1.65
Trim3-201ENSMUST00000057525 Ccdc88bQ4QRL3 1481 aa25.36■■□□□ 1.65
Trim3-201ENSMUST00000057525 Unc13aQ4KUS2 1712 aa25.33■■□□□ 1.65
Trim3-201ENSMUST00000057525 Phldb1Q6PDH0 1371 aaKnown RBP25.3■■□□□ 1.64
Trim3-201ENSMUST00000057525 Ubl4bQ9CQ84 188 aa25.29■■□□□ 1.64
Trim3-201ENSMUST00000057525 Kif15Q6P9L6 1387 aa25.19■■□□□ 1.62
Trim3-201ENSMUST00000057525 Gab3Q8BSM5 595 aa25.16■■□□□ 1.62
Trim3-201ENSMUST00000057525 Fam135aQ6NS59 1506 aa25.16■■□□□ 1.62
Trim3-201ENSMUST00000057525 Il27Q8K3I6 234 aa25.12■■□□□ 1.61
Trim3-201ENSMUST00000057525 Fmn1Q05860 1466 aa25.09■■□□□ 1.61
Trim3-201ENSMUST00000057525 Cep164Q5DU05 1446 aa25.09■■□□□ 1.61
Trim3-201ENSMUST00000057525 Lamc3Q9R0B6 1581 aa24.99■■□□□ 1.59
Trim3-201ENSMUST00000057525 Cux2P70298 1426 aa24.94■■□□□ 1.58
Trim3-201ENSMUST00000057525 TnnQ80Z71 1560 aa24.92■■□□□ 1.58
Trim3-201ENSMUST00000057525 Npm1Q61937 292 aaKnown RBP24.83■■□□□ 1.57
Trim3-201ENSMUST00000057525 Top2aQ01320 1528 aaKnown RBP24.8■■□□□ 1.56
Trim3-201ENSMUST00000057525 Ccdc18Q640L5 1455 aa24.73■■□□□ 1.55
Trim3-201ENSMUST00000057525 Camsap1A2AHC3 1581 aa24.73■■□□□ 1.55
Trim3-201ENSMUST00000057525 Mrc2Q64449 1479 aa24.72■■□□□ 1.55
Trim3-201ENSMUST00000057525 Npm2Q80W85 207 aa24.66■■□□□ 1.54
Trim3-201ENSMUST00000057525 PtprkP35822 1457 aa24.54■■□□□ 1.52
Trim3-201ENSMUST00000057525 LrpprcQ6PB66 1392 aaKnown RBP24.53■■□□□ 1.52
Trim3-201ENSMUST00000057525 Myt1lP97500 1187 aa24.51■■□□□ 1.51
Trim3-201ENSMUST00000057525 Ehmt2Q9Z148 1263 aaKnown RBP24.51■■□□□ 1.51
Trim3-201ENSMUST00000057525 Baz1bQ9Z277 1479 aa24.5■■□□□ 1.51
Trim3-201ENSMUST00000057525 Grin2bQ01097 1482 aa24.49■■□□□ 1.51
Trim3-201ENSMUST00000057525 Kif21aQ9QXL2 1672 aa24.49■■□□□ 1.51
Trim3-201ENSMUST00000057525 Rapgef2Q8CHG7 1496 aa24.49■■□□□ 1.51
Trim3-201ENSMUST00000057525 Dhx29Q6PGC1 1365 aaKnown RBP24.47■■□□□ 1.51
Trim3-201ENSMUST00000057525 Zeb1Q64318 1117 aa24.44■■□□□ 1.5
Trim3-201ENSMUST00000057525 PogzQ8BZH4 1409 aaKnown RBP24.39■■□□□ 1.5
Trim3-201ENSMUST00000057525 Duox2A2AQ99 1517 aa24.37■■□□□ 1.49
Trim3-201ENSMUST00000057525 Shroom4Q1W617 1475 aa24.35■■□□□ 1.49
Trim3-201ENSMUST00000057525 NrkQ9R0G8 1455 aa24.35■■□□□ 1.49
Trim3-201ENSMUST00000057525 Cep162Q6ZQ06 1403 aa24.34■■□□□ 1.49
Trim3-201ENSMUST00000057525 Crocc2F6XLV1 1638 aa24.25■■□□□ 1.47
Trim3-201ENSMUST00000057525 Efcab5A0JP43 1406 aa24.23■■□□□ 1.47
Trim3-201ENSMUST00000057525 Plb1Q3TTY0 1478 aa24.23■■□□□ 1.47
Trim3-201ENSMUST00000057525 Arhgap35Q91YM2 1499 aa24.2■■□□□ 1.46
Trim3-201ENSMUST00000057525 Samd9lQ69Z37 1561 aa24.19■■□□□ 1.46
Trim3-201ENSMUST00000057525 Rad54l2Q99NG0 1466 aa24.16■■□□□ 1.46
Trim3-201ENSMUST00000057525 Urb2E9Q7L1 1524 aaKnown RBP24.16■■□□□ 1.46
Trim3-201ENSMUST00000057525 Lrriq1Q0P5X1 1673 aa24.15■■□□□ 1.46
Trim3-201ENSMUST00000057525 Eif4g1Q6NZJ6 1600 aaKnown RBP24.1■■□□□ 1.45
Trim3-201ENSMUST00000057525 Mroh2bQ7M6Y6 1581 aa24.09■■□□□ 1.45
Trim3-201ENSMUST00000057525 Clip1Q922J3 1391 aa23.99■■□□□ 1.43
Trim3-201ENSMUST00000057525 Ap3b1Q9Z1T1 1105 aa23.98■■□□□ 1.43
Trim3-201ENSMUST00000057525 Disp1Q3TDN0 1521 aa23.96■■□□□ 1.43
Trim3-201ENSMUST00000057525 SynmQ70IV5 1561 aa23.96■■□□□ 1.43
Trim3-201ENSMUST00000057525 Map3k1P53349 1493 aa23.93■■□□□ 1.42
Trim3-201ENSMUST00000057525 Magi3Q9EQJ9 1476 aa23.88■■□□□ 1.41
Trim3-201ENSMUST00000057525 Ift140E9PY46 1464 aa23.87■■□□□ 1.41
Trim3-201ENSMUST00000057525 Grin2aP35436 1464 aa23.87■■□□□ 1.41
Trim3-201ENSMUST00000057525 Carmil1Q6EDY6 1374 aa23.87■■□□□ 1.41
Trim3-201ENSMUST00000057525 Setd1bQ8CFT2 1985 aa23.86■■□□□ 1.41
Trim3-201ENSMUST00000057525 Pla2r1Q62028 1487 aa23.85■■□□□ 1.41
Trim3-201ENSMUST00000057525 Setd5Q5XJV7 1441 aa23.82■■□□□ 1.4
Trim3-201ENSMUST00000057525 Plekhg3Q4VAC9 1341 aa23.78■■□□□ 1.4
Trim3-201ENSMUST00000057525 Cux1P53564 1515 aa23.78■■□□□ 1.4
Retrieved 100 of 22,080 RNA–protein pairs in 89.9 ms