RNA–Protein interactions for RNA: ENSMUST00000030791.11

Smarcd3-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarcd3, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3-201ENSMUST00000030791 MplkipQ9D011 178 aa10.55□□□□□ -0.72
Smarcd3-201ENSMUST00000030791 Ubl5Q9EPV8 73 aa10.53□□□□□ -0.72
Smarcd3-201ENSMUST00000030791 Gm18596A0A1W2P860 280 aa10.49□□□□□ -0.73
Smarcd3-201ENSMUST00000030791 Reg3aO09037 175 aa10.49□□□□□ -0.73
Smarcd3-201ENSMUST00000030791 Defa21Q8C1P2 93 aa10.48□□□□□ -0.73
Smarcd3-201ENSMUST00000030791 Gm5965D3Z724 196 aa10.47□□□□□ -0.73
Smarcd3-201ENSMUST00000030791 GhrhP16043 103 aa10.47□□□□□ -0.73
Smarcd3-201ENSMUST00000030791 Trav3-1Q5R1I8 114 aa10.47□□□□□ -0.73
Smarcd3-201ENSMUST00000030791 Lyrm7Q9DA03 104 aa10.47□□□□□ -0.73
Smarcd3-201ENSMUST00000030791 Cypt15B1AXS0 87 aa10.46□□□□□ -0.74
Smarcd3-201ENSMUST00000030791 BatfO35284 125 aa10.39□□□□□ -0.75
Smarcd3-201ENSMUST00000030791 Cdip1Q9DB75 208 aa10.38□□□□□ -0.75
Smarcd3-201ENSMUST00000030791 A930033H14RikG5E8X6 103 aa10.38□□□□□ -0.75
Smarcd3-201ENSMUST00000030791 Cystm1Q8K353 104 aa10.38□□□□□ -0.75
Smarcd3-201ENSMUST00000030791 Gm5767A0A0J9YTU8 78 aa10.37□□□□□ -0.75
Smarcd3-201ENSMUST00000030791 Gm11939A2A592 99 aa10.37□□□□□ -0.75
Smarcd3-201ENSMUST00000030791 Igkv8-19A0A0G2JFN8 121 aa10.36□□□□□ -0.75
Smarcd3-201ENSMUST00000030791 Tmem254aP0DN89 123 aa10.33□□□□□ -0.76
Smarcd3-201ENSMUST00000030791 Tmem254bP0DN90 123 aa10.33□□□□□ -0.76
Smarcd3-201ENSMUST00000030791 Tmem254cP0DN91 123 aa10.33□□□□□ -0.76
Smarcd3-201ENSMUST00000030791 Igkv3-3A0A140T8Q0 119 aa10.3□□□□□ -0.76
Smarcd3-201ENSMUST00000030791 Gm26620Q9CY65 116 aa10.3□□□□□ -0.76
Smarcd3-201ENSMUST00000030791 Prr15lQ8JZM2 100 aa10.24□□□□□ -0.77
Smarcd3-201ENSMUST00000030791 BikO70337 150 aa10.22□□□□□ -0.77
Smarcd3-201ENSMUST00000030791 Hist1h4aP62806 103 aaKnown RBP10.22□□□□□ -0.77
Smarcd3-201ENSMUST00000030791 Ush2AQ2QI47 5193 aa10.22□□□□□ -0.77
Smarcd3-201ENSMUST00000030791 Defb13Q8R2I4 64 aa10.19□□□□□ -0.78
Smarcd3-201ENSMUST00000030791 Gm10267M0QWD8 85 aa10.17□□□□□ -0.78
Smarcd3-201ENSMUST00000030791 Gm9821Q8K076 103 aa10.16□□□□□ -0.78
Smarcd3-201ENSMUST00000030791 Krtap15-1Q9QZU5 150 aa10.15□□□□□ -0.78
Smarcd3-201ENSMUST00000030791 Anapc13Q8R034 74 aa10.13□□□□□ -0.79
Smarcd3-201ENSMUST00000030791 A0A286YE49 62 aa10.1□□□□□ -0.79
Smarcd3-201ENSMUST00000030791 Prm1P02319 51 aa10.1□□□□□ -0.79
Smarcd3-201ENSMUST00000030791 Samd13D3YUG0 102 aa10.09□□□□□ -0.79
Smarcd3-201ENSMUST00000030791 Atp5eP56382 52 aa10.07□□□□□ -0.8
Smarcd3-201ENSMUST00000030791 Hmcn2A2AJ76 5100 aa10.07□□□□□ -0.8
Smarcd3-201ENSMUST00000030791 Scgb1b2O35176 93 aa10.07□□□□□ -0.8
Smarcd3-201ENSMUST00000030791 Spink8Q09TK9 105 aa10.06□□□□□ -0.8
Smarcd3-201ENSMUST00000030791 Gm9789Q8BIG3 52 aa10.04□□□□□ -0.8
Smarcd3-201ENSMUST00000030791 Fam229bQ8CF36 80 aa10.04□□□□□ -0.8
Smarcd3-201ENSMUST00000030791 Gm7735D3YX18 52 aa10.03□□□□□ -0.8
Smarcd3-201ENSMUST00000030791 Rpl37Q9D823 97 aa10.02□□□□□ -0.81
Smarcd3-201ENSMUST00000030791 Naa38Q9D2U5 125 aa9.99□□□□□ -0.81
Smarcd3-201ENSMUST00000030791 Ubr4A2AN08 5180 aa9.95□□□□□ -0.82
Smarcd3-201ENSMUST00000030791 Ndufc1Q9CQY9 76 aa9.93□□□□□ -0.82
Smarcd3-201ENSMUST00000030791 Krtap3-2Q9D638 99 aa9.93□□□□□ -0.82
Smarcd3-201ENSMUST00000030791 Krtap3-3Q9D7P0 99 aa9.93□□□□□ -0.82
Smarcd3-201ENSMUST00000030791 Sec61bQ9CQS8 96 aaKnown RBP9.9□□□□□ -0.82
Smarcd3-201ENSMUST00000030791 2310057N15RikQ9D6T8 200 aa9.9□□□□□ -0.82
Smarcd3-201ENSMUST00000030791 1700074P13RikQ9D9G7 251 aa9.9□□□□□ -0.82
Smarcd3-201ENSMUST00000030791 Pcp4P63054 62 aa9.89□□□□□ -0.83
Smarcd3-201ENSMUST00000030791 7530416G11RikJ3QJX6 159 aa9.87□□□□□ -0.83
Smarcd3-201ENSMUST00000030791 4932415D10RikA0A1W2P6U8 4986 aa9.85□□□□□ -0.83
Smarcd3-201ENSMUST00000030791 Prr13Q9CQJ5 137 aa9.85□□□□□ -0.83
Smarcd3-201ENSMUST00000030791 2310034C09RikQ9D746 214 aa9.84□□□□□ -0.83
Smarcd3-201ENSMUST00000030791 Rnase13Q5GAM7 153 aa9.82□□□□□ -0.84
Smarcd3-201ENSMUST00000030791 Apoc4Q61268 124 aa9.81□□□□□ -0.84
Smarcd3-201ENSMUST00000030791 Gm4491E0CX42 125 aa9.77□□□□□ -0.85
Smarcd3-201ENSMUST00000030791 4930518I15RikQ3V2W7 57 aa9.76□□□□□ -0.85
Smarcd3-201ENSMUST00000030791 Gm28539A0A087WSL9 92 aa9.69□□□□□ -0.86
Smarcd3-201ENSMUST00000030791 Crct1Q6PAI5 102 aa9.65□□□□□ -0.86
Smarcd3-201ENSMUST00000030791 Serp2Q6TAW2 65 aa9.65□□□□□ -0.86
Smarcd3-201ENSMUST00000030791 Q8BGJ3 129 aa9.65□□□□□ -0.86
Smarcd3-201ENSMUST00000030791 Gm10999F6Q4M4 69 aa9.65□□□□□ -0.87
Smarcd3-201ENSMUST00000030791 Defb38Q7TNV7 63 aa9.65□□□□□ -0.87
Smarcd3-201ENSMUST00000030791 Krtap1-3A2A588 173 aa9.64□□□□□ -0.87
Smarcd3-201ENSMUST00000030791 Atox1O08997 68 aaKnown RBP9.62□□□□□ -0.87
Smarcd3-201ENSMUST00000030791 B230307C23RikQ8BLB2 64 aa9.59□□□□□ -0.87
Smarcd3-201ENSMUST00000030791 SmcpP15265 143 aa9.58□□□□□ -0.88
Smarcd3-201ENSMUST00000030791 Chtf8P0CG14 533 aa9.57□□□□□ -0.88
Smarcd3-201ENSMUST00000030791 Gm17416Q30KP4 66 aa9.56□□□□□ -0.88
Smarcd3-201ENSMUST00000030791 ZanO88799 5376 aa9.56□□□□□ -0.88
Smarcd3-201ENSMUST00000030791 Coa6Q8BGD8 79 aa9.54□□□□□ -0.88
Smarcd3-201ENSMUST00000030791 Spint4Q9D263 159 aa9.53□□□□□ -0.88
Smarcd3-201ENSMUST00000030791 Krtap16-3Q8C1I6 86 aa9.51□□□□□ -0.89
Smarcd3-201ENSMUST00000030791 Smim20D3Z7Q2 69 aa9.51□□□□□ -0.89
Smarcd3-201ENSMUST00000030791 Gm21798J3QNU5 87 aa9.5□□□□□ -0.89
Smarcd3-201ENSMUST00000030791 9230102O04RikA2ASX7 82 aa9.48□□□□□ -0.89
Smarcd3-201ENSMUST00000030791 Gm10160F6Y577 67 aa9.48□□□□□ -0.89
Smarcd3-201ENSMUST00000030791 Krtap19-1Q925H2 87 aa9.46□□□□□ -0.89
Smarcd3-201ENSMUST00000030791 Krtap19-3Q925H6 87 aa9.45□□□□□ -0.9
Smarcd3-201ENSMUST00000030791 Fat4Q2PZL6 4981 aa9.44□□□□□ -0.9
Smarcd3-201ENSMUST00000030791 4930507D05RikQ8C9C9 103 aa9.44□□□□□ -0.9
Smarcd3-201ENSMUST00000030791 SvipQ3UZP4 77 aa9.43□□□□□ -0.9
Smarcd3-201ENSMUST00000030791 2310079G19RikQ9D6L6 185 aa9.43□□□□□ -0.9
Smarcd3-201ENSMUST00000030791 Fam229aB2KGE5 128 aa9.42□□□□□ -0.9
Smarcd3-201ENSMUST00000030791 Gm10318A0A1W2P728 225 aa9.41□□□□□ -0.9
Smarcd3-201ENSMUST00000030791 Tmem258P61166 79 aa9.4□□□□□ -0.9
Smarcd3-201ENSMUST00000030791 LorP18165 486 aa9.39□□□□□ -0.91
Smarcd3-201ENSMUST00000030791 Rnf213E9Q555 5152 aaKnown RBP9.37□□□□□ -0.91
Smarcd3-201ENSMUST00000030791 Gm19935A0A1B0GSF9 52 aa9.36□□□□□ -0.91
Smarcd3-201ENSMUST00000030791 Rps28P62858 69 aaKnown RBP9.3□□□□□ -0.92
Smarcd3-201ENSMUST00000030791 Gm10643Q3URG9 111 aa9.29□□□□□ -0.92
Smarcd3-201ENSMUST00000030791 Krtap13-1Q8K198 168 aa9.28□□□□□ -0.92
Smarcd3-201ENSMUST00000030791 Coa5Q99M07 74 aa9.28□□□□□ -0.92
Smarcd3-201ENSMUST00000030791 Gm19402J3QJV4 266 aa9.26□□□□□ -0.93
Smarcd3-201ENSMUST00000030791 2210017I01RikA0A0A6YVV1 95 aa9.25□□□□□ -0.93
Smarcd3-201ENSMUST00000030791 1700042G07RikB1AUF7 90 aa9.25□□□□□ -0.93
Smarcd3-201ENSMUST00000030791 Smlr1J3QMJ4 66 aa9.24□□□□□ -0.93
Smarcd3-201ENSMUST00000030791 Defb1P56386 69 aa9.2□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms