RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 Krtap10-4Q08EG8 221 aa10.77□□□□□ -0.69
Chmp6-201ENSMUST00000026434 Anapc11Q9CPX9 84 aa10.76□□□□□ -0.69
Chmp6-201ENSMUST00000026434 Spint4Q9D263 159 aa10.76□□□□□ -0.69
Chmp6-201ENSMUST00000026434 Pkd1O08852 4293 aa10.74□□□□□ -0.69
Chmp6-201ENSMUST00000026434 Krtap13O88375 197 aa10.73□□□□□ -0.69
Chmp6-201ENSMUST00000026434 Serp1Q9Z1W5 66 aa10.72□□□□□ -0.69
Chmp6-201ENSMUST00000026434 Dnah5Q8VHE6 4621 aa10.7□□□□□ -0.7
Chmp6-201ENSMUST00000026434 1700074P13RikQ9D9G7 251 aa10.7□□□□□ -0.7
Chmp6-201ENSMUST00000026434 Wfdc3Q14AE4 130 aa10.67□□□□□ -0.7
Chmp6-201ENSMUST00000026434 SnurfQ9WU12 71 aa10.64□□□□□ -0.71
Chmp6-201ENSMUST00000026434 Mrpl55Q9CZ83 127 aa10.62□□□□□ -0.71
Chmp6-201ENSMUST00000026434 Dph3Q8K0W9 82 aa10.61□□□□□ -0.71
Chmp6-201ENSMUST00000026434 Hectd4E9Q2E4 4418 aa10.6□□□□□ -0.71
Chmp6-201ENSMUST00000026434 Ryr3A2AGL3 4863 aa10.6□□□□□ -0.71
Chmp6-201ENSMUST00000026434 Cypt15B1AXS0 87 aa10.59□□□□□ -0.71
Chmp6-201ENSMUST00000026434 Ryr2E9Q401 4966 aaKnown RBP10.57□□□□□ -0.72
Chmp6-201ENSMUST00000026434 Brk1Q91VR8 75 aa10.56□□□□□ -0.72
Chmp6-201ENSMUST00000026434 Cdc42se1Q8BHL7 80 aa10.55□□□□□ -0.72
Chmp6-201ENSMUST00000026434 Spaca4Q80ZQ0 127 aa10.54□□□□□ -0.72
Chmp6-201ENSMUST00000026434 Coa5Q99M07 74 aa10.54□□□□□ -0.72
Chmp6-201ENSMUST00000026434 Dync1h1Q9JHU4 4644 aaKnown RBP10.54□□□□□ -0.72
Chmp6-201ENSMUST00000026434 Defb12Q8K4N3 78 aa10.52□□□□□ -0.73
Chmp6-201ENSMUST00000026434 Lrp1bQ9JI18 4599 aa10.52□□□□□ -0.73
Chmp6-201ENSMUST00000026434 Gm2696A0A1W2P709 240 aa10.51□□□□□ -0.73
Chmp6-201ENSMUST00000026434 Defb13Q8R2I4 64 aa10.51□□□□□ -0.73
Chmp6-201ENSMUST00000026434 Gm10267M0QWD8 85 aa10.5□□□□□ -0.73
Chmp6-201ENSMUST00000026434 SvipQ3UZP4 77 aa10.5□□□□□ -0.73
Chmp6-201ENSMUST00000026434 Chtf8P0CG14 533 aa10.49□□□□□ -0.73
Chmp6-201ENSMUST00000026434 Rps29P62274 56 aa10.49□□□□□ -0.73
Chmp6-201ENSMUST00000026434 H2al1aQ5M8Q2 105 aa10.49□□□□□ -0.73
Chmp6-201ENSMUST00000026434 Gm10160F6Y577 67 aa10.47□□□□□ -0.73
Chmp6-201ENSMUST00000026434 Fat1A0A1L1SQU7 4645 aa10.45□□□□□ -0.74
Chmp6-201ENSMUST00000026434 Gm10643Q3URG9 111 aa10.43□□□□□ -0.74
Chmp6-201ENSMUST00000026434 Stard9Q80TF6 4561 aa10.4□□□□□ -0.74
Chmp6-201ENSMUST00000026434 SacsQ9JLC8 4582 aa10.37□□□□□ -0.75
Chmp6-201ENSMUST00000026434 A530084C06RikQ3UTW2 186 aa10.36□□□□□ -0.75
Chmp6-201ENSMUST00000026434 Gm10197F6QEY5 67 aa10.34□□□□□ -0.75
Chmp6-201ENSMUST00000026434 Fat2Q5F226 4351 aa10.31□□□□□ -0.76
Chmp6-201ENSMUST00000026434 Pkhd1E9PZ36 4059 aa10.29□□□□□ -0.76
Chmp6-201ENSMUST00000026434 Gm26620Q9CY65 116 aa10.27□□□□□ -0.76
Chmp6-201ENSMUST00000026434 RetnlbQ99P86 105 aa10.26□□□□□ -0.77
Chmp6-201ENSMUST00000026434 Phxr4P15974 95 aa10.24□□□□□ -0.77
Chmp6-201ENSMUST00000026434 Pkhd1l1Q80ZA4 4249 aa10.21□□□□□ -0.77
Chmp6-201ENSMUST00000026434 Defb38Q7TNV7 63 aa10.17□□□□□ -0.78
Chmp6-201ENSMUST00000026434 Gm21798J3QNU5 87 aa10.15□□□□□ -0.78
Chmp6-201ENSMUST00000026434 Gm10337F7DEP7 55 aa10.14□□□□□ -0.79
Chmp6-201ENSMUST00000026434 Sox16Q62247 57 aa10.13□□□□□ -0.79
Chmp6-201ENSMUST00000026434 Krtap3-2Q9D638 99 aa10.1□□□□□ -0.79
Chmp6-201ENSMUST00000026434 Krtap3-3Q9D7P0 99 aa10.1□□□□□ -0.79
Chmp6-201ENSMUST00000026434 H2al1bA0A087WP11 105 aa10.08□□□□□ -0.8
Chmp6-201ENSMUST00000026434 H2al1kJ3QP08 105 aa10.08□□□□□ -0.8
Chmp6-201ENSMUST00000026434 H2al1eQ810S6 105 aa10.08□□□□□ -0.8
Chmp6-201ENSMUST00000026434 H2al1mQ9DAD9 105 aa10.08□□□□□ -0.8
Chmp6-201ENSMUST00000026434 Gm20661K7N787 53 aa10.07□□□□□ -0.8
Chmp6-201ENSMUST00000026434 Gm11939A2A592 99 aa10.06□□□□□ -0.8
Chmp6-201ENSMUST00000026434 Gm10999F6Q4M4 69 aa10.05□□□□□ -0.8
Chmp6-201ENSMUST00000026434 A930033H14RikG5E8X6 103 aa10.05□□□□□ -0.8
Chmp6-201ENSMUST00000026434 Ndufb1P0DN34 57 aa10.03□□□□□ -0.8
Chmp6-201ENSMUST00000026434 Q8BGJ3 129 aa10.03□□□□□ -0.8
Chmp6-201ENSMUST00000026434 Krtap19-5O08632 62 aa10.02□□□□□ -0.81
Chmp6-201ENSMUST00000026434 2310034C09RikQ9D746 214 aa10.01□□□□□ -0.81
Chmp6-201ENSMUST00000026434 Limd2Q8BGB5 128 aa10.01□□□□□ -0.81
Chmp6-201ENSMUST00000026434 4930507D05RikQ8C9C9 103 aa10.01□□□□□ -0.81
Chmp6-201ENSMUST00000026434 Birc6O88738 4882 aa9.99□□□□□ -0.81
Chmp6-201ENSMUST00000026434 Uqcr11Q9CPX8 56 aa9.97□□□□□ -0.81
Chmp6-201ENSMUST00000026434 D6Ertd527eA0A0N4SWI3 464 aa9.94□□□□□ -0.82
Chmp6-201ENSMUST00000026434 2310079G19RikQ9D6L6 185 aa9.94□□□□□ -0.82
Chmp6-201ENSMUST00000026434 Gm5767A0A0J9YTU8 78 aa9.93□□□□□ -0.82
Chmp6-201ENSMUST00000026434 Herc2Q4U2R1 4836 aa9.93□□□□□ -0.82
Chmp6-201ENSMUST00000026434 Vps13bQ80TY5 3993 aa9.92□□□□□ -0.82
Chmp6-201ENSMUST00000026434 Gm4491E0CX42 125 aa9.92□□□□□ -0.82
Chmp6-201ENSMUST00000026434 SptssbQ925E8 76 aa9.91□□□□□ -0.82
Chmp6-201ENSMUST00000026434 Dnah8Q91XQ0 4731 aa9.89□□□□□ -0.83
Chmp6-201ENSMUST00000026434 9230102O04RikA2ASX7 82 aa9.87□□□□□ -0.83
Chmp6-201ENSMUST00000026434 Fat3Q8BNA6 4555 aa9.86□□□□□ -0.83
Chmp6-201ENSMUST00000026434 4933415A04RikQ9D443 101 aa9.84□□□□□ -0.83
Chmp6-201ENSMUST00000026434 Kmt2cQ8BRH4 4903 aa9.84□□□□□ -0.83
Chmp6-201ENSMUST00000026434 Lce1mQ9CR91 182 aa9.83□□□□□ -0.84
Chmp6-201ENSMUST00000026434 PcloQ9QYX7 5068 aa9.82□□□□□ -0.84
Chmp6-201ENSMUST00000026434 Abca13Q5SSE9 5034 aa9.78□□□□□ -0.84
Chmp6-201ENSMUST00000026434 Lrp1Q91ZX7 4545 aaKnown RBP9.76□□□□□ -0.85
Chmp6-201ENSMUST00000026434 Kiaa1109A2AAE1 5005 aa9.69□□□□□ -0.86
Chmp6-201ENSMUST00000026434 Rpl37Q9D823 97 aa9.67□□□□□ -0.86
Chmp6-201ENSMUST00000026434 Gm18596A0A1W2P860 280 aa9.65□□□□□ -0.86
Chmp6-201ENSMUST00000026434 Rnase13Q5GAM7 153 aa9.63□□□□□ -0.87
Chmp6-201ENSMUST00000026434 HydinQ80W93 5154 aa9.62□□□□□ -0.87
Chmp6-201ENSMUST00000026434 Defb1P56386 69 aa9.62□□□□□ -0.87
Chmp6-201ENSMUST00000026434 Dnhd1D3Z2X2 4750 aa9.61□□□□□ -0.87
Chmp6-201ENSMUST00000026434 Herc1E9PZP8 4859 aa9.6□□□□□ -0.87
Chmp6-201ENSMUST00000026434 Gm9736A0A1W2P7N1 277 aa9.58□□□□□ -0.88
Chmp6-201ENSMUST00000026434 Gm5965D3Z724 196 aa9.58□□□□□ -0.88
Chmp6-201ENSMUST00000026434 Gm9821Q8K076 103 aa9.55□□□□□ -0.88
Chmp6-201ENSMUST00000026434 Cox6b2Q80ZN9 88 aa9.54□□□□□ -0.88
Chmp6-201ENSMUST00000026434 Gm17416Q30KP4 66 aa9.53□□□□□ -0.88
Chmp6-201ENSMUST00000026434 Krtap15-1Q9QZU5 150 aa9.52□□□□□ -0.89
Chmp6-201ENSMUST00000026434 Sec61gP60060 68 aa9.51□□□□□ -0.89
Chmp6-201ENSMUST00000026434 Mycbp2Q7TPH6 4711 aa9.46□□□□□ -0.9
Chmp6-201ENSMUST00000026434 Gm3646F6S692 53 aa9.37□□□□□ -0.91
Chmp6-201ENSMUST00000026434 Gm17606F6ZL36 78 aa9.31□□□□□ -0.92
Chmp6-201ENSMUST00000026434 Ndufs5Q99LY9 106 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 253.8 ms