RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 NischQ80TM9 1593 aa36.57■■■■□ 3.45
Chmp6-201ENSMUST00000026434 Gm35339A0A140LHH9 1649 aa36.36■■■■□ 3.41
Chmp6-201ENSMUST00000026434 Abcc9P70170 1546 aa35.54■■■■□ 3.28
Chmp6-201ENSMUST00000026434 Abcc8B2RUS7 1588 aa34.92■■■■□ 3.18
Chmp6-201ENSMUST00000026434 Rhox8Q6VSS7 320 aa33.14■■■□□ 2.9
Chmp6-201ENSMUST00000026434 Dcaf1Q80TR8 1506 aa32.81■■■□□ 2.84
Chmp6-201ENSMUST00000026434 Rtl1Q7M732 1744 aa32.69■■■□□ 2.82
Chmp6-201ENSMUST00000026434 ScribQ80U72 1612 aa32.6■■■□□ 2.81
Chmp6-201ENSMUST00000026434 NacadQ5SWP3 1504 aa32.01■■■□□ 2.72
Chmp6-201ENSMUST00000026434 Ccdc180J3QNE4 1664 aa32■■■□□ 2.71
Chmp6-201ENSMUST00000026434 Kdm5dQ62240 1548 aa31.97■■■□□ 2.71
Chmp6-201ENSMUST00000026434 Rb1cc1Q9ESK9 1588 aa31.95■■■□□ 2.71
Chmp6-201ENSMUST00000026434 Baz1aO88379 1555 aa31.7■■■□□ 2.66
Chmp6-201ENSMUST00000026434 Crybg2B7ZCC2 1516 aa31.56■■■□□ 2.64
Chmp6-201ENSMUST00000026434 Zcchc6Q5BLK4 1491 aaKnown RBP31.37■■■□□ 2.61
Chmp6-201ENSMUST00000026434 Sycp2Q9CUU3 1500 aa31.26■■■□□ 2.6
Chmp6-201ENSMUST00000026434 Smarca2Q6DIC0 1577 aa30.91■■■□□ 2.54
Chmp6-201ENSMUST00000026434 Ccdc136Q3TVA9 1136 aa30.71■■■□□ 2.51
Chmp6-201ENSMUST00000026434 HrcG5E8J6 738 aa30.62■■■□□ 2.49
Chmp6-201ENSMUST00000026434 Trim41Q5NCC3 630 aa30.59■■■□□ 2.49
Chmp6-201ENSMUST00000026434 BicraF8VPZ9 1578 aa30.45■■■□□ 2.46
Chmp6-201ENSMUST00000026434 Brd4Q9ESU6 1400 aaKnown RBP30.28■■■□□ 2.44
Chmp6-201ENSMUST00000026434 Cecr2E9Q2Z1 1453 aa30.08■■■□□ 2.41
Chmp6-201ENSMUST00000026434 CftrP26361 1476 aa29.8■■■□□ 2.36
Chmp6-201ENSMUST00000026434 Synj1Q8CHC4 1574 aa29.79■■■□□ 2.36
Chmp6-201ENSMUST00000026434 Smarca4Q3TKT4 1613 aaKnown RBP29.79■■■□□ 2.36
Chmp6-201ENSMUST00000026434 Golga3P55937 1487 aa29.7■■■□□ 2.34
Chmp6-201ENSMUST00000026434 Cep164Q5DU05 1446 aa29.69■■■□□ 2.34
Chmp6-201ENSMUST00000026434 Cttnbp2B9EJA2 1648 aa29.69■■■□□ 2.34
Chmp6-201ENSMUST00000026434 Atad2bE9Q166 1460 aaKnown RBP29.52■■■□□ 2.32
Chmp6-201ENSMUST00000026434 Pds5bQ4VA53 1446 aaKnown RBP29.51■■■□□ 2.31
Chmp6-201ENSMUST00000026434 Cngb1E1AZ71 1325 aa29.47■■■□□ 2.31
Chmp6-201ENSMUST00000026434 Esf1Q3V1V3 845 aaKnown RBP29.43■■■□□ 2.3
Chmp6-201ENSMUST00000026434 Iqgap2Q3UQ44 1575 aa29.37■■■□□ 2.29
Chmp6-201ENSMUST00000026434 Top2bQ64511 1612 aa29.37■■■□□ 2.29
Chmp6-201ENSMUST00000026434 Rsf1E9PWW9 1441 aaKnown RBP29.31■■■□□ 2.28
Chmp6-201ENSMUST00000026434 Rpgrip1Q9EPQ2 1331 aa29.2■■■□□ 2.26
Chmp6-201ENSMUST00000026434 Chic1Q8CBW7 227 aa29.18■■■□□ 2.26
Chmp6-201ENSMUST00000026434 Ccdc88bQ4QRL3 1481 aa29.15■■■□□ 2.26
Chmp6-201ENSMUST00000026434 Fmn1Q05860 1466 aa29.06■■■□□ 2.24
Chmp6-201ENSMUST00000026434 Wdr62Q3U3T8 1523 aa28.9■■■□□ 2.22
Chmp6-201ENSMUST00000026434 Frmpd1A2AKB4 1549 aa28.86■■■□□ 2.21
Chmp6-201ENSMUST00000026434 Ercc6F8VPZ5 1481 aa28.86■■■□□ 2.21
Chmp6-201ENSMUST00000026434 Cc2d2aQ8CFW7 1633 aa28.84■■■□□ 2.21
Chmp6-201ENSMUST00000026434 Top2aQ01320 1528 aaKnown RBP28.74■■■□□ 2.19
Chmp6-201ENSMUST00000026434 Acin1Q9JIX8 1338 aaKnown RBP28.74■■■□□ 2.19
Chmp6-201ENSMUST00000026434 Gab3Q8BSM5 595 aa28.71■■■□□ 2.19
Chmp6-201ENSMUST00000026434 TnnQ80Z71 1560 aa28.68■■■□□ 2.18
Chmp6-201ENSMUST00000026434 Dnajc5bQ9CQ94 199 aa28.65■■■□□ 2.18
Chmp6-201ENSMUST00000026434 Lamc3Q9R0B6 1581 aa28.59■■■□□ 2.17
Chmp6-201ENSMUST00000026434 Rapgef2Q8CHG7 1496 aa28.58■■■□□ 2.17
Chmp6-201ENSMUST00000026434 Thoc2B1AZI6 1594 aaKnown RBP28.48■■■□□ 2.15
Chmp6-201ENSMUST00000026434 Phldb1Q6PDH0 1371 aaKnown RBP28.48■■■□□ 2.15
Chmp6-201ENSMUST00000026434 Ehmt2Q9Z148 1263 aaKnown RBP28.4■■■□□ 2.14
Chmp6-201ENSMUST00000026434 Kif15Q6P9L6 1387 aa28.38■■■□□ 2.13
Chmp6-201ENSMUST00000026434 Unc13aQ4KUS2 1712 aa28.34■■■□□ 2.13
Chmp6-201ENSMUST00000026434 Cep162Q6ZQ06 1403 aa28.32■■■□□ 2.12
Chmp6-201ENSMUST00000026434 Ccdc18Q640L5 1455 aa28.23■■■□□ 2.11
Chmp6-201ENSMUST00000026434 Fam135aQ6NS59 1506 aa28.22■■■□□ 2.11
Chmp6-201ENSMUST00000026434 Baz1bQ9Z277 1479 aa28.22■■■□□ 2.11
Chmp6-201ENSMUST00000026434 NrkQ9R0G8 1455 aa28.19■■■□□ 2.1
Chmp6-201ENSMUST00000026434 Camsap1A2AHC3 1581 aa28.17■■■□□ 2.1
Chmp6-201ENSMUST00000026434 Npm2Q80W85 207 aa28.16■■■□□ 2.1
Chmp6-201ENSMUST00000026434 Eif4g1Q6NZJ6 1600 aaKnown RBP28.13■■■□□ 2.09
Chmp6-201ENSMUST00000026434 Ubl4bQ9CQ84 188 aa28.12■■■□□ 2.09
Chmp6-201ENSMUST00000026434 Shroom4Q1W617 1475 aa28.05■■■□□ 2.08
Chmp6-201ENSMUST00000026434 Cux2P70298 1426 aa28.02■■■□□ 2.08
Chmp6-201ENSMUST00000026434 Grin2bQ01097 1482 aa28■■■□□ 2.07
Chmp6-201ENSMUST00000026434 Map3k1P53349 1493 aa27.96■■■□□ 2.07
Chmp6-201ENSMUST00000026434 Npm1Q61937 292 aaKnown RBP27.94■■■□□ 2.06
Chmp6-201ENSMUST00000026434 Arhgap35Q91YM2 1499 aa27.94■■■□□ 2.06
Chmp6-201ENSMUST00000026434 Il27Q8K3I6 234 aa27.94■■■□□ 2.06
Chmp6-201ENSMUST00000026434 PtprkP35822 1457 aa27.92■■■□□ 2.06
Chmp6-201ENSMUST00000026434 Myt1lP97500 1187 aa27.9■■■□□ 2.06
Chmp6-201ENSMUST00000026434 Efcab5A0JP43 1406 aa27.88■■■□□ 2.05
Chmp6-201ENSMUST00000026434 LrpprcQ6PB66 1392 aaKnown RBP27.83■■■□□ 2.05
Chmp6-201ENSMUST00000026434 Clip1Q922J3 1391 aa27.79■■■□□ 2.04
Chmp6-201ENSMUST00000026434 Mroh2bQ7M6Y6 1581 aa27.77■■■□□ 2.04
Chmp6-201ENSMUST00000026434 PogzQ8BZH4 1409 aaKnown RBP27.76■■■□□ 2.03
Chmp6-201ENSMUST00000026434 AqrQ8CFQ3 1481 aaKnown RBP27.72■■■□□ 2.03
Chmp6-201ENSMUST00000026434 Eea1Q8BL66 1411 aa27.71■■■□□ 2.03
Chmp6-201ENSMUST00000026434 NefmP08553 848 aa27.71■■■□□ 2.03
Chmp6-201ENSMUST00000026434 Duox2A2AQ99 1517 aa27.64■■■□□ 2.02
Chmp6-201ENSMUST00000026434 Mier1Q5UAK0 511 aa27.61■■■□□ 2.01
Chmp6-201ENSMUST00000026434 Mrc2Q64449 1479 aa27.6■■■□□ 2.01
Chmp6-201ENSMUST00000026434 Zeb1Q64318 1117 aa27.58■■■□□ 2.01
Chmp6-201ENSMUST00000026434 Carmil1Q6EDY6 1374 aa27.56■■■□□ 2
Chmp6-201ENSMUST00000026434 Dhx29Q6PGC1 1365 aaKnown RBP27.55■■■□□ 2
Chmp6-201ENSMUST00000026434 Setd5Q5XJV7 1441 aa27.53■■■□□ 2
Chmp6-201ENSMUST00000026434 UbtfP25976 765 aaKnown RBP27.47■■□□□ 1.99
Chmp6-201ENSMUST00000026434 Arhgef5E9Q7D5 1581 aa27.46■■□□□ 1.99
Chmp6-201ENSMUST00000026434 Rpap1Q80TE0 1409 aa27.44■■□□□ 1.98
Chmp6-201ENSMUST00000026434 Arap1Q4LDD4 1452 aa27.44■■□□□ 1.98
Chmp6-201ENSMUST00000026434 Erich3F6QRE9 1637 aa27.41■■□□□ 1.98
Chmp6-201ENSMUST00000026434 SynmQ70IV5 1561 aa27.4■■□□□ 1.98
Chmp6-201ENSMUST00000026434 Crocc2F6XLV1 1638 aa27.37■■□□□ 1.97
Chmp6-201ENSMUST00000026434 Polr1aO35134 1717 aaKnown RBP27.36■■□□□ 1.97
Chmp6-201ENSMUST00000026434 Ankrd26Q811D2 1581 aa27.34■■□□□ 1.97
Chmp6-201ENSMUST00000026434 Samd9lQ69Z37 1561 aa27.3■■□□□ 1.96
Chmp6-201ENSMUST00000026434 Plekhg3Q4VAC9 1341 aa27.29■■□□□ 1.96
Retrieved 100 of 22,080 RNA–protein pairs in 1025.5 ms