RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 Q8BT88 171 aa9.24□□□□□ -0.93
Ubb-201ENSMUST00000019649 Cypt14J3QPF7 87 aa9.22□□□□□ -0.93
Ubb-201ENSMUST00000019649 Igkv3-4A0A140T8Q4 119 aa9.21□□□□□ -0.93
Ubb-201ENSMUST00000019649 MplkipQ9D011 178 aa9.21□□□□□ -0.94
Ubb-201ENSMUST00000019649 Igkv3-10A0A0G2JGN0 119 aa9.2□□□□□ -0.94
Ubb-201ENSMUST00000019649 Gm37013Q8K491 104 aa9.2□□□□□ -0.94
Ubb-201ENSMUST00000019649 Mrpl34Q99N91 92 aa9.16□□□□□ -0.94
Ubb-201ENSMUST00000019649 Gm44790A0A0N4SV91 103 aa9.15□□□□□ -0.94
Ubb-201ENSMUST00000019649 Anapc13Q8R034 74 aa9.15□□□□□ -0.94
Ubb-201ENSMUST00000019649 SvipQ3UZP4 77 aa9.15□□□□□ -0.95
Ubb-201ENSMUST00000019649 C130032M10RikQ8C888 123 aa9.15□□□□□ -0.95
Ubb-201ENSMUST00000019649 UqcrqQ9CQ69 82 aa9.13□□□□□ -0.95
Ubb-201ENSMUST00000019649 Spaca4Q80ZQ0 127 aa9.11□□□□□ -0.95
Ubb-201ENSMUST00000019649 Hmcn2A2AJ76 5100 aa9.11□□□□□ -0.95
Ubb-201ENSMUST00000019649 Gm20604F8WIA3 75 aa9.09□□□□□ -0.95
Ubb-201ENSMUST00000019649 Hist1h4aP62806 103 aaKnown RBP9.09□□□□□ -0.95
Ubb-201ENSMUST00000019649 Gm21886J3QJU9 214 aa9.08□□□□□ -0.96
Ubb-201ENSMUST00000019649 Rps29P62274 56 aa9.08□□□□□ -0.96
Ubb-201ENSMUST00000019649 4932415D10RikA0A1W2P6U8 4986 aa9.08□□□□□ -0.96
Ubb-201ENSMUST00000019649 Gm5965D3Z724 196 aa9.08□□□□□ -0.96
Ubb-201ENSMUST00000019649 Cystm1Q8K353 104 aa9.08□□□□□ -0.96
Ubb-201ENSMUST00000019649 Ubr4A2AN08 5180 aa9.07□□□□□ -0.96
Ubb-201ENSMUST00000019649 Dph3Q8K0W9 82 aa9.04□□□□□ -0.96
Ubb-201ENSMUST00000019649 Gm16253D3Z167 63 aa9□□□□□ -0.97
Ubb-201ENSMUST00000019649 Igkv8-19A0A0G2JFN8 121 aa8.99□□□□□ -0.97
Ubb-201ENSMUST00000019649 Ndufc1Q9CQY9 76 aa8.98□□□□□ -0.97
Ubb-201ENSMUST00000019649 Gm2310J3QNJ2 377 aa8.97□□□□□ -0.97
Ubb-201ENSMUST00000019649 Reg3aO09037 175 aa8.96□□□□□ -0.98
Ubb-201ENSMUST00000019649 Prr15lQ8JZM2 100 aa8.95□□□□□ -0.98
Ubb-201ENSMUST00000019649 Gm5767A0A0J9YTU8 78 aa8.94□□□□□ -0.98
Ubb-201ENSMUST00000019649 Fam229bQ8CF36 80 aa8.92□□□□□ -0.98
Ubb-201ENSMUST00000019649 7530416G11RikJ3QJX6 159 aa8.91□□□□□ -0.98
Ubb-201ENSMUST00000019649 4930518I15RikQ3V2W7 57 aa8.88□□□□□ -0.99
Ubb-201ENSMUST00000019649 Serp2Q6TAW2 65 aa8.87□□□□□ -0.99
Ubb-201ENSMUST00000019649 Naa38Q9D2U5 125 aa8.83□□□□□ -1
Ubb-201ENSMUST00000019649 Defa21Q8C1P2 93 aa8.82□□□□□ -1
Ubb-201ENSMUST00000019649 Samd13D3YUG0 102 aa8.81□□□□□ -1
Ubb-201ENSMUST00000019649 Spink8Q09TK9 105 aa8.81□□□□□ -1
Ubb-201ENSMUST00000019649 Gm9821Q8K076 103 aa8.8□□□□□ -1
Ubb-201ENSMUST00000019649 Igkv3-3A0A140T8Q0 119 aa8.79□□□□□ -1
Ubb-201ENSMUST00000019649 A0A286YE49 62 aa8.79□□□□□ -1
Ubb-201ENSMUST00000019649 Apoc4Q61268 124 aa8.77□□□□□ -1
Ubb-201ENSMUST00000019649 Gm11939A2A592 99 aa8.77□□□□□ -1.01
Ubb-201ENSMUST00000019649 Prr13Q9CQJ5 137 aa8.77□□□□□ -1.01
Ubb-201ENSMUST00000019649 Cypt15B1AXS0 87 aa8.73□□□□□ -1.01
Ubb-201ENSMUST00000019649 B230307C23RikQ8BLB2 64 aa8.7□□□□□ -1.02
Ubb-201ENSMUST00000019649 Krtap1-3A2A588 173 aa8.68□□□□□ -1.02
Ubb-201ENSMUST00000019649 BikO70337 150 aa8.67□□□□□ -1.02
Ubb-201ENSMUST00000019649 Krtap15-1Q9QZU5 150 aa8.67□□□□□ -1.02
Ubb-201ENSMUST00000019649 Sec61bQ9CQS8 96 aaKnown RBP8.66□□□□□ -1.02
Ubb-201ENSMUST00000019649 2310057N15RikQ9D6T8 200 aa8.65□□□□□ -1.02
Ubb-201ENSMUST00000019649 1700074P13RikQ9D9G7 251 aa8.64□□□□□ -1.03
Ubb-201ENSMUST00000019649 Gm26620Q9CY65 116 aa8.61□□□□□ -1.03
Ubb-201ENSMUST00000019649 ZanO88799 5376 aa8.6□□□□□ -1.03
Ubb-201ENSMUST00000019649 Defb13Q8R2I4 64 aa8.58□□□□□ -1.04
Ubb-201ENSMUST00000019649 Atox1O08997 68 aaKnown RBP8.57□□□□□ -1.04
Ubb-201ENSMUST00000019649 Coa6Q8BGD8 79 aa8.57□□□□□ -1.04
Ubb-201ENSMUST00000019649 Gm28539A0A087WSL9 92 aa8.57□□□□□ -1.04
Ubb-201ENSMUST00000019649 Gm10267M0QWD8 85 aa8.56□□□□□ -1.04
Ubb-201ENSMUST00000019649 Scgb1b2O35176 93 aa8.54□□□□□ -1.04
Ubb-201ENSMUST00000019649 Spint4Q9D263 159 aa8.54□□□□□ -1.04
Ubb-201ENSMUST00000019649 Rpl37Q9D823 97 aa8.54□□□□□ -1.04
Ubb-201ENSMUST00000019649 Tmem258P61166 79 aa8.52□□□□□ -1.05
Ubb-201ENSMUST00000019649 Crct1Q6PAI5 102 aa8.52□□□□□ -1.05
Ubb-201ENSMUST00000019649 SmcpP15265 143 aa8.49□□□□□ -1.05
Ubb-201ENSMUST00000019649 Smlr1J3QMJ4 66 aa8.47□□□□□ -1.05
Ubb-201ENSMUST00000019649 2310034C09RikQ9D746 214 aa8.47□□□□□ -1.05
Ubb-201ENSMUST00000019649 Gm19935A0A1B0GSF9 52 aa8.45□□□□□ -1.06
Ubb-201ENSMUST00000019649 Fat4Q2PZL6 4981 aa8.44□□□□□ -1.06
Ubb-201ENSMUST00000019649 LorP18165 486 aa8.43□□□□□ -1.06
Ubb-201ENSMUST00000019649 Chtf8P0CG14 533 aa8.42□□□□□ -1.06
Ubb-201ENSMUST00000019649 Pet100P0DJE0 76 aa8.38□□□□□ -1.07
Ubb-201ENSMUST00000019649 Krtap4-1Q3UUY3 169 aa8.37□□□□□ -1.07
Ubb-201ENSMUST00000019649 Rnf213E9Q555 5152 aaKnown RBP8.37□□□□□ -1.07
Ubb-201ENSMUST00000019649 Coa5Q99M07 74 aa8.36□□□□□ -1.07
Ubb-201ENSMUST00000019649 Gm10160F6Y577 67 aa8.35□□□□□ -1.07
Ubb-201ENSMUST00000019649 SnurfQ9WU12 71 aa8.35□□□□□ -1.07
Ubb-201ENSMUST00000019649 Smim20D3Z7Q2 69 aa8.34□□□□□ -1.07
Ubb-201ENSMUST00000019649 Pcp4P63054 62 aa8.34□□□□□ -1.07
Ubb-201ENSMUST00000019649 Krtap3-2Q9D638 99 aa8.34□□□□□ -1.07
Ubb-201ENSMUST00000019649 Krtap3-3Q9D7P0 99 aa8.34□□□□□ -1.07
Ubb-201ENSMUST00000019649 Krtap16-3Q8C1I6 86 aa8.33□□□□□ -1.08
Ubb-201ENSMUST00000019649 Krtap19-1Q925H2 87 aa8.32□□□□□ -1.08
Ubb-201ENSMUST00000019649 Krtap19-3Q925H6 87 aa8.32□□□□□ -1.08
Ubb-201ENSMUST00000019649 Defb38Q7TNV7 63 aa8.29□□□□□ -1.08
Ubb-201ENSMUST00000019649 Rps28P62858 69 aaKnown RBP8.28□□□□□ -1.08
Ubb-201ENSMUST00000019649 Rnase13Q5GAM7 153 aa8.26□□□□□ -1.09
Ubb-201ENSMUST00000019649 Serp1Q9Z1W5 66 aa8.26□□□□□ -1.09
Ubb-201ENSMUST00000019649 Gm19402J3QJV4 266 aa8.26□□□□□ -1.09
Ubb-201ENSMUST00000019649 Gm10643Q3URG9 111 aa8.26□□□□□ -1.09
Ubb-201ENSMUST00000019649 1700042G07RikB1AUF7 90 aa8.24□□□□□ -1.09
Ubb-201ENSMUST00000019649 Gm21798J3QNU5 87 aa8.23□□□□□ -1.09
Ubb-201ENSMUST00000019649 Cdc42se1Q8BHL7 80 aa8.23□□□□□ -1.09
Ubb-201ENSMUST00000019649 Gm10999F6Q4M4 69 aa8.22□□□□□ -1.09
Ubb-201ENSMUST00000019649 Gm10061D3Z714 54 aa8.2□□□□□ -1.1
Ubb-201ENSMUST00000019649 Q8BGJ3 129 aa8.19□□□□□ -1.1
Ubb-201ENSMUST00000019649 Brk1Q91VR8 75 aa8.19□□□□□ -1.1
Ubb-201ENSMUST00000019649 Gm10318A0A1W2P728 225 aa8.19□□□□□ -1.1
Ubb-201ENSMUST00000019649 Gm4491E0CX42 125 aa8.19□□□□□ -1.1
Ubb-201ENSMUST00000019649 Krtap1-4Q3V2D6 188 aa8.18□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 69.7 ms