RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 Gm35339A0A140LHH9 1649 aa36.41■■■■□ 3.42
Ubb-201ENSMUST00000019649 NischQ80TM9 1593 aa35.83■■■■□ 3.33
Ubb-201ENSMUST00000019649 Abcc9P70170 1546 aa34.73■■■■□ 3.15
Ubb-201ENSMUST00000019649 Abcc8B2RUS7 1588 aa34.66■■■■□ 3.14
Ubb-201ENSMUST00000019649 ScribQ80U72 1612 aa33.44■■■□□ 2.94
Ubb-201ENSMUST00000019649 NacadQ5SWP3 1504 aa32.35■■■□□ 2.77
Ubb-201ENSMUST00000019649 Kdm5dQ62240 1548 aa32.3■■■□□ 2.76
Ubb-201ENSMUST00000019649 Dcaf1Q80TR8 1506 aa31.94■■■□□ 2.7
Ubb-201ENSMUST00000019649 Sycp2Q9CUU3 1500 aa31.72■■■□□ 2.67
Ubb-201ENSMUST00000019649 BicraF8VPZ9 1578 aa31.29■■■□□ 2.6
Ubb-201ENSMUST00000019649 Rb1cc1Q9ESK9 1588 aa31.25■■■□□ 2.59
Ubb-201ENSMUST00000019649 Ccdc180J3QNE4 1664 aa30.91■■■□□ 2.54
Ubb-201ENSMUST00000019649 Baz1aO88379 1555 aa30.82■■■□□ 2.53
Ubb-201ENSMUST00000019649 Rhox8Q6VSS7 320 aa30.82■■■□□ 2.52
Ubb-201ENSMUST00000019649 Crybg2B7ZCC2 1516 aa30.72■■■□□ 2.51
Ubb-201ENSMUST00000019649 Pds5bQ4VA53 1446 aaKnown RBP30.37■■■□□ 2.45
Ubb-201ENSMUST00000019649 Zcchc6Q5BLK4 1491 aaKnown RBP30.28■■■□□ 2.44
Ubb-201ENSMUST00000019649 Dnajc5bQ9CQ94 199 aa30.25■■■□□ 2.43
Ubb-201ENSMUST00000019649 Thoc2B1AZI6 1594 aaKnown RBP30.17■■■□□ 2.42
Ubb-201ENSMUST00000019649 Atad2bE9Q166 1460 aaKnown RBP30.1■■■□□ 2.41
Ubb-201ENSMUST00000019649 Smarca2Q6DIC0 1577 aa29.93■■■□□ 2.38
Ubb-201ENSMUST00000019649 Smarca4Q3TKT4 1613 aaKnown RBP29.89■■■□□ 2.38
Ubb-201ENSMUST00000019649 Cecr2E9Q2Z1 1453 aa29.76■■■□□ 2.35
Ubb-201ENSMUST00000019649 Ercc6F8VPZ5 1481 aa29.73■■■□□ 2.35
Ubb-201ENSMUST00000019649 Iqgap2Q3UQ44 1575 aa29.72■■■□□ 2.35
Ubb-201ENSMUST00000019649 Cc2d2aQ8CFW7 1633 aa29.64■■■□□ 2.34
Ubb-201ENSMUST00000019649 Rtl1Q7M732 1744 aa29.53■■■□□ 2.32
Ubb-201ENSMUST00000019649 Fam135aQ6NS59 1506 aa29.49■■■□□ 2.31
Ubb-201ENSMUST00000019649 Wdr62Q3U3T8 1523 aa29.47■■■□□ 2.31
Ubb-201ENSMUST00000019649 Frmpd1A2AKB4 1549 aa29.4■■■□□ 2.3
Ubb-201ENSMUST00000019649 Phldb1Q6PDH0 1371 aaKnown RBP29.21■■■□□ 2.27
Ubb-201ENSMUST00000019649 Baz1bQ9Z277 1479 aa29.19■■■□□ 2.26
Ubb-201ENSMUST00000019649 Cttnbp2B9EJA2 1648 aa29.14■■■□□ 2.25
Ubb-201ENSMUST00000019649 CftrP26361 1476 aa29.11■■■□□ 2.25
Ubb-201ENSMUST00000019649 Unc13aQ4KUS2 1712 aa29.07■■■□□ 2.24
Ubb-201ENSMUST00000019649 Synj1Q8CHC4 1574 aa29.06■■■□□ 2.24
Ubb-201ENSMUST00000019649 Brd4Q9ESU6 1400 aaKnown RBP29.03■■■□□ 2.24
Ubb-201ENSMUST00000019649 Ubl4bQ9CQ84 188 aa28.85■■■□□ 2.21
Ubb-201ENSMUST00000019649 Ccdc136Q3TVA9 1136 aa28.84■■■□□ 2.21
Ubb-201ENSMUST00000019649 Mrc2Q64449 1479 aa28.75■■■□□ 2.19
Ubb-201ENSMUST00000019649 Esf1Q3V1V3 845 aaKnown RBP28.47■■■□□ 2.15
Ubb-201ENSMUST00000019649 Trim41Q5NCC3 630 aa28.46■■■□□ 2.15
Ubb-201ENSMUST00000019649 Rsf1E9PWW9 1441 aaKnown RBP28.38■■■□□ 2.13
Ubb-201ENSMUST00000019649 Kif15Q6P9L6 1387 aa28.3■■■□□ 2.12
Ubb-201ENSMUST00000019649 Lamc3Q9R0B6 1581 aa28.3■■■□□ 2.12
Ubb-201ENSMUST00000019649 Cux2P70298 1426 aa28.29■■■□□ 2.12
Ubb-201ENSMUST00000019649 Lrriq1Q0P5X1 1673 aa28.16■■■□□ 2.1
Ubb-201ENSMUST00000019649 Kif21aQ9QXL2 1672 aa28.14■■■□□ 2.1
Ubb-201ENSMUST00000019649 Top2bQ64511 1612 aa28.07■■■□□ 2.08
Ubb-201ENSMUST00000019649 Golga3P55937 1487 aa28.02■■■□□ 2.08
Ubb-201ENSMUST00000019649 TnnQ80Z71 1560 aa28.02■■■□□ 2.08
Ubb-201ENSMUST00000019649 Npm1Q61937 292 aaKnown RBP27.94■■■□□ 2.06
Ubb-201ENSMUST00000019649 Cep164Q5DU05 1446 aa27.91■■■□□ 2.06
Ubb-201ENSMUST00000019649 Ccdc18Q640L5 1455 aa27.83■■■□□ 2.05
Ubb-201ENSMUST00000019649 Camsap1A2AHC3 1581 aa27.79■■■□□ 2.04
Ubb-201ENSMUST00000019649 Cngb1E1AZ71 1325 aa27.78■■■□□ 2.04
Ubb-201ENSMUST00000019649 Eif4g3Q80XI3 1579 aaKnown RBP27.77■■■□□ 2.04
Ubb-201ENSMUST00000019649 Fmn1Q05860 1466 aa27.73■■■□□ 2.03
Ubb-201ENSMUST00000019649 Dhx29Q6PGC1 1365 aaKnown RBP27.7■■■□□ 2.03
Ubb-201ENSMUST00000019649 LrpprcQ6PB66 1392 aaKnown RBP27.67■■■□□ 2.02
Ubb-201ENSMUST00000019649 Urb2E9Q7L1 1524 aaKnown RBP27.67■■■□□ 2.02
Ubb-201ENSMUST00000019649 Crocc2F6XLV1 1638 aa27.63■■■□□ 2.01
Ubb-201ENSMUST00000019649 Il27Q8K3I6 234 aa27.63■■■□□ 2.01
Ubb-201ENSMUST00000019649 Plb1Q3TTY0 1478 aa27.61■■■□□ 2.01
Ubb-201ENSMUST00000019649 PogzQ8BZH4 1409 aaKnown RBP27.53■■■□□ 2
Ubb-201ENSMUST00000019649 Ift140E9PY46 1464 aa27.41■■□□□ 1.98
Ubb-201ENSMUST00000019649 Grin2bQ01097 1482 aa27.39■■□□□ 1.98
Ubb-201ENSMUST00000019649 Duox2A2AQ99 1517 aa27.39■■□□□ 1.98
Ubb-201ENSMUST00000019649 Shroom2A2ALU4 1481 aa27.38■■□□□ 1.97
Ubb-201ENSMUST00000019649 Dnajc5P60904 198 aa27.36■■□□□ 1.97
Ubb-201ENSMUST00000019649 Rusc2Q80U22 1514 aa27.33■■□□□ 1.97
Ubb-201ENSMUST00000019649 Ccdc88bQ4QRL3 1481 aa27.25■■□□□ 1.95
Ubb-201ENSMUST00000019649 Samd9lQ69Z37 1561 aa27.22■■□□□ 1.95
Ubb-201ENSMUST00000019649 Top2aQ01320 1528 aaKnown RBP27.22■■□□□ 1.95
Ubb-201ENSMUST00000019649 Disp1Q3TDN0 1521 aa27.2■■□□□ 1.94
Ubb-201ENSMUST00000019649 Efcab5A0JP43 1406 aa27.19■■□□□ 1.94
Ubb-201ENSMUST00000019649 Pbrm1Q8BSQ9 1634 aaKnown RBP27.18■■□□□ 1.94
Ubb-201ENSMUST00000019649 Setd1bQ8CFT2 1985 aa27.11■■□□□ 1.93
Ubb-201ENSMUST00000019649 Nup160Q9Z0W3 1402 aaKnown RBP27.11■■□□□ 1.93
Ubb-201ENSMUST00000019649 NrkQ9R0G8 1455 aa27.1■■□□□ 1.93
Ubb-201ENSMUST00000019649 Cc2d2bA0A286YDU8 1405 aa27.05■■□□□ 1.92
Ubb-201ENSMUST00000019649 Pabpn1Q8CCS6 302 aaKnown RBP27■■□□□ 1.91
Ubb-201ENSMUST00000019649 Chic1Q8CBW7 227 aa26.99■■□□□ 1.91
Ubb-201ENSMUST00000019649 Shroom4Q1W617 1475 aa26.97■■□□□ 1.91
Ubb-201ENSMUST00000019649 Col17a1Q07563 1470 aa26.96■■□□□ 1.91
Ubb-201ENSMUST00000019649 Rad54l2Q99NG0 1466 aa26.96■■□□□ 1.91
Ubb-201ENSMUST00000019649 Magi3Q9EQJ9 1476 aa26.96■■□□□ 1.91
Ubb-201ENSMUST00000019649 Grin2aP35436 1464 aa26.94■■□□□ 1.9
Ubb-201ENSMUST00000019649 PtprkP35822 1457 aa26.91■■□□□ 1.9
Ubb-201ENSMUST00000019649 Gpatch8A2A6A1 1505 aa26.9■■□□□ 1.9
Ubb-201ENSMUST00000019649 AqrQ8CFQ3 1481 aaKnown RBP26.88■■□□□ 1.89
Ubb-201ENSMUST00000019649 SynmQ70IV5 1561 aa26.84■■□□□ 1.89
Ubb-201ENSMUST00000019649 Pelp1Q9DBD5 1123 aaKnown RBP26.81■■□□□ 1.88
Ubb-201ENSMUST00000019649 Pla2r1Q62028 1487 aa26.79■■□□□ 1.88
Ubb-201ENSMUST00000019649 Zcchc11B2RX14 1644 aaKnown RBP26.79■■□□□ 1.88
Ubb-201ENSMUST00000019649 Fgd6Q69ZL1 1399 aa26.72■■□□□ 1.87
Ubb-201ENSMUST00000019649 Mroh2bQ7M6Y6 1581 aa26.6■■□□□ 1.85
Ubb-201ENSMUST00000019649 Zeb1Q64318 1117 aa26.57■■□□□ 1.84
Ubb-201ENSMUST00000019649 Abca16E9PWJ7 1678 aa26.53■■□□□ 1.84
Ubb-201ENSMUST00000019649 TchhA0A0B4J1F9 1599 aa26.51■■□□□ 1.83
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms