RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 Tmem243B2RVB9 118 aa12.02□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Hint1P70349 126 aaKnown RBP12.02□□□□□ -0.49
Pcf11-204ENSMUST00000208058 5930422O12RikQ8C4Y4 123 aa12.02□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Xlr5cQ9JJR2 179 aa12.02□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Plscr4P58196 326 aa12.01□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Smr3aQ61900 147 aa12.01□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Defb37Q7TMD2 62 aa12.01□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Vpreb3D3Z6J4 130 aa12□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Gm10320E9PW43 113 aa11.99□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Lamtor3O88653 124 aa11.99□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Trappc1Q5NCF2 145 aa11.99□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Smim1P0C8K7 78 aa11.98□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Defb29Q8BGW9 78 aa11.98□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Gm5142Q8C5X9 133 aa11.98□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Gm2310J3QNJ2 377 aa11.97□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Gm5868Q8BJG1 145 aa11.97□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Fat4Q2PZL6 4981 aa11.97□□□□□ -0.49
Pcf11-204ENSMUST00000208058 Defb45Q3V490 66 aa11.95□□□□□ -0.5
Pcf11-204ENSMUST00000208058 H2al1nQ497L1 109 aa11.95□□□□□ -0.5
Pcf11-204ENSMUST00000208058 A0A286YE02 88 aa11.94□□□□□ -0.5
Pcf11-204ENSMUST00000208058 BC107364E9Q5A2 140 aa11.93□□□□□ -0.5
Pcf11-204ENSMUST00000208058 Tma7Q8K003 64 aaKnown RBP11.93□□□□□ -0.5
Pcf11-204ENSMUST00000208058 Eif4ebp3Q80VV3 101 aa11.92□□□□□ -0.5
Pcf11-204ENSMUST00000208058 Dnal4Q9DCM4 105 aa11.92□□□□□ -0.5
Pcf11-204ENSMUST00000208058 SelenowP63300 88 aa11.91□□□□□ -0.5
Pcf11-204ENSMUST00000208058 A830005F24RikQ8BRT5 167 aa11.91□□□□□ -0.5
Pcf11-204ENSMUST00000208058 Gm9821Q8K076 103 aa11.91□□□□□ -0.5
Pcf11-204ENSMUST00000208058 Cited4Q9WUL8 182 aa11.91□□□□□ -0.5
Pcf11-204ENSMUST00000208058 2310057N15RikQ9D6T8 200 aa11.89□□□□□ -0.51
Pcf11-204ENSMUST00000208058 Ighv10-1A0A0B4J1J6 119 aa11.88□□□□□ -0.51
Pcf11-204ENSMUST00000208058 P0C913 63 aa11.88□□□□□ -0.51
Pcf11-204ENSMUST00000208058 Gm21886J3QJU9 214 aa11.87□□□□□ -0.51
Pcf11-204ENSMUST00000208058 Smim26Q3V460 107 aa11.84□□□□□ -0.51
Pcf11-204ENSMUST00000208058 Vmn1r197Q8R265 298 aa11.83□□□□□ -0.52
Pcf11-204ENSMUST00000208058 Igkv3-4A0A140T8Q4 119 aa11.82□□□□□ -0.52
Pcf11-204ENSMUST00000208058 Vamp8O70404 101 aa11.82□□□□□ -0.52
Pcf11-204ENSMUST00000208058 Crct1Q6PAI5 102 aa11.82□□□□□ -0.52
Pcf11-204ENSMUST00000208058 IqcjQ8BPW0 110 aa11.82□□□□□ -0.52
Pcf11-204ENSMUST00000208058 Krtap17-1A2A5X6 109 aa11.8□□□□□ -0.52
Pcf11-204ENSMUST00000208058 Gm10401E9Q3K6 71 aa11.78□□□□□ -0.52
Pcf11-204ENSMUST00000208058 Q8BT88 171 aa11.78□□□□□ -0.52
Pcf11-204ENSMUST00000208058 Sec61bQ9CQS8 96 aaKnown RBP11.78□□□□□ -0.52
Pcf11-204ENSMUST00000208058 Pam16Q9CQV1 125 aa11.77□□□□□ -0.53
Pcf11-204ENSMUST00000208058 Gm16253D3Z167 63 aa11.76□□□□□ -0.53
Pcf11-204ENSMUST00000208058 LorP18165 486 aa11.76□□□□□ -0.53
Pcf11-204ENSMUST00000208058 Rnf213E9Q555 5152 aaKnown RBP11.75□□□□□ -0.53
Pcf11-204ENSMUST00000208058 Gm37389A0A0A6YW05 95 aa11.75□□□□□ -0.53
Pcf11-204ENSMUST00000208058 Gm11939A2A592 99 aa11.75□□□□□ -0.53
Pcf11-204ENSMUST00000208058 A730071L15RikQ8C4X0 137 aa11.75□□□□□ -0.53
Pcf11-204ENSMUST00000208058 4930535I16RikQ9CUI2 172 aa11.75□□□□□ -0.53
Pcf11-204ENSMUST00000208058 Uqcc3Q8K2T4 89 aa11.74□□□□□ -0.53
Pcf11-204ENSMUST00000208058 Rpl39lQ9CQD0 51 aa11.73□□□□□ -0.53
Pcf11-204ENSMUST00000208058 Krtap15-1Q9QZU5 150 aa11.73□□□□□ -0.53
Pcf11-204ENSMUST00000208058 Ctxnd2A0A1B0GQX3 59 aa11.72□□□□□ -0.53
Pcf11-204ENSMUST00000208058 Rab37Q9JKM7 223 aa11.71□□□□□ -0.53
Pcf11-204ENSMUST00000208058 Gemin7Q9CWY4 129 aa11.69□□□□□ -0.54
Pcf11-204ENSMUST00000208058 Trav3-4A0A075B654 114 aa11.68□□□□□ -0.54
Pcf11-204ENSMUST00000208058 Igkv8-21A0A140T8P7 120 aa11.68□□□□□ -0.54
Pcf11-204ENSMUST00000208058 Gm19402J3QJV4 266 aa11.67□□□□□ -0.54
Pcf11-204ENSMUST00000208058 Tal2Q62282 108 aa11.67□□□□□ -0.54
Pcf11-204ENSMUST00000208058 1700018G05RikA0A1B0GSI2 66 aa11.65□□□□□ -0.54
Pcf11-204ENSMUST00000208058 Gm11562A0PK51 136 aa11.65□□□□□ -0.54
Pcf11-204ENSMUST00000208058 Grcc10O35127 126 aa11.65□□□□□ -0.54
Pcf11-204ENSMUST00000208058 P06320 134 aa11.65□□□□□ -0.54
Pcf11-204ENSMUST00000208058 Chchd10Q7TNL9 138 aa11.64□□□□□ -0.55
Pcf11-204ENSMUST00000208058 Igkv1-35A0A0G2JDE5 120 aa11.63□□□□□ -0.55
Pcf11-204ENSMUST00000208058 Gm16381A0A1Y7VKT9 73 aa11.61□□□□□ -0.55
Pcf11-204ENSMUST00000208058 CckP09240 115 aa11.6□□□□□ -0.55
Pcf11-204ENSMUST00000208058 Igkv8-28A0A0G2JE47 121 aa11.58□□□□□ -0.56
Pcf11-204ENSMUST00000208058 Igkv2-109A0A075B5K6 120 aa11.57□□□□□ -0.56
Pcf11-204ENSMUST00000208058 Sigmar1O55242 223 aa11.56□□□□□ -0.56
Pcf11-204ENSMUST00000208058 Gm10061D3Z714 54 aa11.53□□□□□ -0.56
Pcf11-204ENSMUST00000208058 2310034C09RikQ9D746 214 aa11.52□□□□□ -0.57
Pcf11-204ENSMUST00000208058 G0s2Q61585 103 aa11.51□□□□□ -0.57
Pcf11-204ENSMUST00000208058 Cox6a2P43023 97 aa11.5□□□□□ -0.57
Pcf11-204ENSMUST00000208058 Rpl37Q9D823 97 aa11.48□□□□□ -0.57
Pcf11-204ENSMUST00000208058 9530003J23RikQ8BM26 151 aa11.47□□□□□ -0.57
Pcf11-204ENSMUST00000208058 Ifitm6A0A1B0GS75 124 aa11.45□□□□□ -0.58
Pcf11-204ENSMUST00000208058 Sfta2E9PXB6 77 aa11.45□□□□□ -0.58
Pcf11-204ENSMUST00000208058 Tac4Q99N14 128 aa11.45□□□□□ -0.58
Pcf11-204ENSMUST00000208058 Krtap19-3Q925H6 87 aa11.44□□□□□ -0.58
Pcf11-204ENSMUST00000208058 1700020N15RikL7MTX3 112 aa11.43□□□□□ -0.58
Pcf11-204ENSMUST00000208058 Krtap16-3Q8C1I6 86 aa11.43□□□□□ -0.58
Pcf11-204ENSMUST00000208058 Gm26620Q9CY65 116 aa11.42□□□□□ -0.58
Pcf11-204ENSMUST00000208058 Defb47Q30KN1 79 aa11.41□□□□□ -0.58
Pcf11-204ENSMUST00000208058 Krtap19-1Q925H2 87 aa11.41□□□□□ -0.58
Pcf11-204ENSMUST00000208058 Vps25Q9CQ80 176 aa11.39□□□□□ -0.59
Pcf11-204ENSMUST00000208058 Gm29423A0A087WRM1 55 aa11.38□□□□□ -0.59
Pcf11-204ENSMUST00000208058 Gm12353A2AGJ4 60 aa11.38□□□□□ -0.59
Pcf11-204ENSMUST00000208058 Cypt15B1AXS0 87 aa11.38□□□□□ -0.59
Pcf11-204ENSMUST00000208058 4930524J08RikQ9CUJ5 163 aa11.38□□□□□ -0.59
Pcf11-204ENSMUST00000208058 P01843 105 aa11.37□□□□□ -0.59
Pcf11-204ENSMUST00000208058 Ccl17F6R5P4 103 aa11.36□□□□□ -0.59
Pcf11-204ENSMUST00000208058 Gm11569B1AQB1 180 aa11.34□□□□□ -0.59
Pcf11-204ENSMUST00000208058 Igkv8-30A0A140T8M3 121 aa11.33□□□□□ -0.6
Pcf11-204ENSMUST00000208058 1700042G07RikB1AUF7 90 aa11.33□□□□□ -0.6
Pcf11-204ENSMUST00000208058 CenpwQ3URR0 86 aa11.33□□□□□ -0.6
Pcf11-204ENSMUST00000208058 Ighv10-3A0A075B5T6 119 aa11.32□□□□□ -0.6
Pcf11-204ENSMUST00000208058 Gm10318A0A1W2P728 225 aa11.3□□□□□ -0.6
Pcf11-204ENSMUST00000208058 Gm10308Q9CVR5 141 aa11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms