RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 Gm35339A0A140LHH9 1649 aa50.15■■■■■ 5.62
Pcf11-204ENSMUST00000208058 NischQ80TM9 1593 aa49.19■■■■■ 5.47
Pcf11-204ENSMUST00000208058 Abcc8B2RUS7 1588 aa47.71■■■■■ 5.23
Pcf11-204ENSMUST00000208058 Abcc9P70170 1546 aa47.64■■■■■ 5.22
Pcf11-204ENSMUST00000208058 ScribQ80U72 1612 aa46.29■■■■■ 5
Pcf11-204ENSMUST00000208058 NacadQ5SWP3 1504 aa44.66■■■■■ 4.74
Pcf11-204ENSMUST00000208058 Kdm5dQ62240 1548 aa44.61■■■■■ 4.73
Pcf11-204ENSMUST00000208058 Dcaf1Q80TR8 1506 aa43.84■■■■■ 4.61
Pcf11-204ENSMUST00000208058 Sycp2Q9CUU3 1500 aa43.83■■■■■ 4.61
Pcf11-204ENSMUST00000208058 BicraF8VPZ9 1578 aa43.33■■■■■ 4.53
Pcf11-204ENSMUST00000208058 Rb1cc1Q9ESK9 1588 aa42.87■■■■■ 4.45
Pcf11-204ENSMUST00000208058 Dnajc5bQ9CQ94 199 aa42.51■■■■■ 4.4
Pcf11-204ENSMUST00000208058 Ccdc180J3QNE4 1664 aa42.25■■■■■ 4.35
Pcf11-204ENSMUST00000208058 Baz1aO88379 1555 aa42.25■■■■■ 4.35
Pcf11-204ENSMUST00000208058 Crybg2B7ZCC2 1516 aa42.11■■■■■ 4.33
Pcf11-204ENSMUST00000208058 Pds5bQ4VA53 1446 aaKnown RBP42.09■■■■■ 4.33
Pcf11-204ENSMUST00000208058 Thoc2B1AZI6 1594 aaKnown RBP42.01■■■■■ 4.32
Pcf11-204ENSMUST00000208058 Rhox8Q6VSS7 320 aa41.9■■■■■ 4.3
Pcf11-204ENSMUST00000208058 Atad2bE9Q166 1460 aaKnown RBP41.65■■■■■ 4.26
Pcf11-204ENSMUST00000208058 Zcchc6Q5BLK4 1491 aaKnown RBP41.59■■■■■ 4.25
Pcf11-204ENSMUST00000208058 Cc2d2aQ8CFW7 1633 aa41.25■■■■■ 4.19
Pcf11-204ENSMUST00000208058 Smarca4Q3TKT4 1613 aaKnown RBP41.21■■■■■ 4.19
Pcf11-204ENSMUST00000208058 Ercc6F8VPZ5 1481 aa41.2■■■■■ 4.19
Pcf11-204ENSMUST00000208058 Smarca2Q6DIC0 1577 aa41.17■■■■■ 4.18
Pcf11-204ENSMUST00000208058 Iqgap2Q3UQ44 1575 aa41.03■■■■■ 4.16
Pcf11-204ENSMUST00000208058 Fam135aQ6NS59 1506 aa40.96■■■■■ 4.15
Pcf11-204ENSMUST00000208058 Cecr2E9Q2Z1 1453 aa40.95■■■■■ 4.15
Pcf11-204ENSMUST00000208058 Wdr62Q3U3T8 1523 aa40.77■■■■■ 4.12
Pcf11-204ENSMUST00000208058 Frmpd1A2AKB4 1549 aa40.67■■■■■ 4.1
Pcf11-204ENSMUST00000208058 Baz1bQ9Z277 1479 aa40.47■■■■■ 4.07
Pcf11-204ENSMUST00000208058 Phldb1Q6PDH0 1371 aaKnown RBP40.46■■■■■ 4.07
Pcf11-204ENSMUST00000208058 Unc13aQ4KUS2 1712 aa40.21■■■■■ 4.03
Pcf11-204ENSMUST00000208058 Rtl1Q7M732 1744 aa40.05■■■■■ 4
Pcf11-204ENSMUST00000208058 Cttnbp2B9EJA2 1648 aa39.98■■■■□ 3.99
Pcf11-204ENSMUST00000208058 Ubl4bQ9CQ84 188 aa39.98■■■■□ 3.99
Pcf11-204ENSMUST00000208058 CftrP26361 1476 aa39.97■■■■□ 3.99
Pcf11-204ENSMUST00000208058 Mrc2Q64449 1479 aa39.94■■■■□ 3.98
Pcf11-204ENSMUST00000208058 Synj1Q8CHC4 1574 aa39.87■■■■□ 3.97
Pcf11-204ENSMUST00000208058 Brd4Q9ESU6 1400 aaKnown RBP39.7■■■■□ 3.95
Pcf11-204ENSMUST00000208058 Ccdc136Q3TVA9 1136 aa39.3■■■■□ 3.88
Pcf11-204ENSMUST00000208058 Lrriq1Q0P5X1 1673 aa39.14■■■■□ 3.86
Pcf11-204ENSMUST00000208058 Cux2P70298 1426 aa39.09■■■■□ 3.85
Pcf11-204ENSMUST00000208058 Rsf1E9PWW9 1441 aaKnown RBP39.07■■■■□ 3.85
Pcf11-204ENSMUST00000208058 Kif15Q6P9L6 1387 aa39.01■■■■□ 3.84
Pcf11-204ENSMUST00000208058 Esf1Q3V1V3 845 aaKnown RBP39.01■■■■□ 3.84
Pcf11-204ENSMUST00000208058 Kif21aQ9QXL2 1672 aa38.98■■■■□ 3.83
Pcf11-204ENSMUST00000208058 Lamc3Q9R0B6 1581 aa38.91■■■■□ 3.82
Pcf11-204ENSMUST00000208058 Dnajc5P60904 198 aa38.8■■■■□ 3.8
Pcf11-204ENSMUST00000208058 Trim41Q5NCC3 630 aa38.78■■■■□ 3.8
Pcf11-204ENSMUST00000208058 Eif4g3Q80XI3 1579 aaKnown RBP38.59■■■■□ 3.77
Pcf11-204ENSMUST00000208058 Npm1Q61937 292 aaKnown RBP38.52■■■■□ 3.76
Pcf11-204ENSMUST00000208058 Cep164Q5DU05 1446 aa38.48■■■■□ 3.75
Pcf11-204ENSMUST00000208058 TnnQ80Z71 1560 aa38.43■■■■□ 3.74
Pcf11-204ENSMUST00000208058 Top2bQ64511 1612 aa38.32■■■■□ 3.73
Pcf11-204ENSMUST00000208058 Urb2E9Q7L1 1524 aaKnown RBP38.31■■■■□ 3.72
Pcf11-204ENSMUST00000208058 Shroom2A2ALU4 1481 aa38.28■■■■□ 3.72
Pcf11-204ENSMUST00000208058 Ccdc18Q640L5 1455 aa38.25■■■■□ 3.71
Pcf11-204ENSMUST00000208058 Dhx29Q6PGC1 1365 aaKnown RBP38.24■■■■□ 3.71
Pcf11-204ENSMUST00000208058 Golga3P55937 1487 aa38.2■■■■□ 3.71
Pcf11-204ENSMUST00000208058 Plb1Q3TTY0 1478 aa38.2■■■■□ 3.71
Pcf11-204ENSMUST00000208058 Camsap1A2AHC3 1581 aa38.18■■■■□ 3.7
Pcf11-204ENSMUST00000208058 Crocc2F6XLV1 1638 aa38.13■■■■□ 3.69
Pcf11-204ENSMUST00000208058 LrpprcQ6PB66 1392 aaKnown RBP38.11■■■■□ 3.69
Pcf11-204ENSMUST00000208058 Il27Q8K3I6 234 aa38.04■■■■□ 3.68
Pcf11-204ENSMUST00000208058 PogzQ8BZH4 1409 aaKnown RBP37.9■■■■□ 3.66
Pcf11-204ENSMUST00000208058 Cngb1E1AZ71 1325 aa37.87■■■■□ 3.65
Pcf11-204ENSMUST00000208058 Rusc2Q80U22 1514 aa37.87■■■■□ 3.65
Pcf11-204ENSMUST00000208058 Fmn1Q05860 1466 aa37.87■■■■□ 3.65
Pcf11-204ENSMUST00000208058 Ift140E9PY46 1464 aa37.86■■■■□ 3.65
Pcf11-204ENSMUST00000208058 Col17a1Q07563 1470 aa37.78■■■■□ 3.64
Pcf11-204ENSMUST00000208058 Duox2A2AQ99 1517 aa37.7■■■■□ 3.63
Pcf11-204ENSMUST00000208058 Pabpn1Q8CCS6 302 aaKnown RBP37.65■■■■□ 3.62
Pcf11-204ENSMUST00000208058 Grin2bQ01097 1482 aa37.59■■■■□ 3.61
Pcf11-204ENSMUST00000208058 Disp1Q3TDN0 1521 aa37.55■■■■□ 3.6
Pcf11-204ENSMUST00000208058 Samd9lQ69Z37 1561 aa37.49■■■■□ 3.59
Pcf11-204ENSMUST00000208058 Setd1bQ8CFT2 1985 aa37.47■■■■□ 3.59
Pcf11-204ENSMUST00000208058 Pbrm1Q8BSQ9 1634 aaKnown RBP37.47■■■■□ 3.59
Pcf11-204ENSMUST00000208058 Nup160Q9Z0W3 1402 aaKnown RBP37.43■■■■□ 3.58
Pcf11-204ENSMUST00000208058 Zcchc11B2RX14 1644 aaKnown RBP37.39■■■■□ 3.58
Pcf11-204ENSMUST00000208058 Pelp1Q9DBD5 1123 aaKnown RBP37.35■■■■□ 3.57
Pcf11-204ENSMUST00000208058 Cc2d2bA0A286YDU8 1405 aa37.34■■■■□ 3.57
Pcf11-204ENSMUST00000208058 Efcab5A0JP43 1406 aa37.32■■■■□ 3.56
Pcf11-204ENSMUST00000208058 Rad54l2Q99NG0 1466 aa37.14■■■■□ 3.54
Pcf11-204ENSMUST00000208058 Magi3Q9EQJ9 1476 aa37.13■■■■□ 3.54
Pcf11-204ENSMUST00000208058 Grin2aP35436 1464 aa37.13■■■■□ 3.53
Pcf11-204ENSMUST00000208058 Top2aQ01320 1528 aaKnown RBP37.11■■■■□ 3.53
Pcf11-204ENSMUST00000208058 AqrQ8CFQ3 1481 aaKnown RBP37.1■■■■□ 3.53
Pcf11-204ENSMUST00000208058 Ccdc88bQ4QRL3 1481 aa37.09■■■■□ 3.53
Pcf11-204ENSMUST00000208058 NrkQ9R0G8 1455 aa37.07■■■■□ 3.53
Pcf11-204ENSMUST00000208058 Gpatch8A2A6A1 1505 aa37.01■■■■□ 3.52
Pcf11-204ENSMUST00000208058 Fgd6Q69ZL1 1399 aa36.96■■■■□ 3.51
Pcf11-204ENSMUST00000208058 Shroom4Q1W617 1475 aa36.89■■■■□ 3.5
Pcf11-204ENSMUST00000208058 Adgrl3Q80TS3 1537 aa36.89■■■■□ 3.5
Pcf11-204ENSMUST00000208058 Cep170Q6A065 1588 aa36.87■■■■□ 3.49
Pcf11-204ENSMUST00000208058 Pla2r1Q62028 1487 aa36.87■■■■□ 3.49
Pcf11-204ENSMUST00000208058 PtprkP35822 1457 aa36.85■■■■□ 3.49
Pcf11-204ENSMUST00000208058 SynmQ70IV5 1561 aa36.84■■■■□ 3.49
Pcf11-204ENSMUST00000208058 Gapvd1Q6PAR5 1458 aa36.82■■■■□ 3.48
Pcf11-204ENSMUST00000208058 Arhgef5E9Q7D5 1581 aa36.76■■■■□ 3.48
Pcf11-204ENSMUST00000208058 Abcc1O35379 1528 aa36.69■■■■□ 3.46
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms