Protein–RNA interactions for Protein: Q8C4Y4

5930422O12Rik, RIKEN cDNA 5930422O12 gene, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5930422O12RikQ8C4Y4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
5930422O12RikQ8C4Y4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
5930422O12RikQ8C4Y4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
5930422O12RikQ8C4Y4 Psd-208ENSMUST00000224556 2034 ntBASIC24.02■■□□□ 1.44
5930422O12RikQ8C4Y4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
5930422O12RikQ8C4Y4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
5930422O12RikQ8C4Y4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
5930422O12RikQ8C4Y4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
5930422O12RikQ8C4Y4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
5930422O12RikQ8C4Y4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
5930422O12RikQ8C4Y4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
5930422O12RikQ8C4Y4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
5930422O12RikQ8C4Y4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
5930422O12RikQ8C4Y4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
5930422O12RikQ8C4Y4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
5930422O12RikQ8C4Y4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
5930422O12RikQ8C4Y4 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.64■■□□□ 1.21
5930422O12RikQ8C4Y4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
5930422O12RikQ8C4Y4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
5930422O12RikQ8C4Y4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
5930422O12RikQ8C4Y4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
5930422O12RikQ8C4Y4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
5930422O12RikQ8C4Y4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
5930422O12RikQ8C4Y4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
5930422O12RikQ8C4Y4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
5930422O12RikQ8C4Y4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
5930422O12RikQ8C4Y4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
5930422O12RikQ8C4Y4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
5930422O12RikQ8C4Y4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
5930422O12RikQ8C4Y4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
5930422O12RikQ8C4Y4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.09■■□□□ 1.13
5930422O12RikQ8C4Y4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
5930422O12RikQ8C4Y4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
5930422O12RikQ8C4Y4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.81■■□□□ 1.08
5930422O12RikQ8C4Y4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
5930422O12RikQ8C4Y4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.74■■□□□ 1.07
5930422O12RikQ8C4Y4 Zxda-201ENSMUST00000117281 2621 ntBASIC21.71■■□□□ 1.07
5930422O12RikQ8C4Y4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
5930422O12RikQ8C4Y4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
5930422O12RikQ8C4Y4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
5930422O12RikQ8C4Y4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
5930422O12RikQ8C4Y4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
5930422O12RikQ8C4Y4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
5930422O12RikQ8C4Y4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
5930422O12RikQ8C4Y4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
5930422O12RikQ8C4Y4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
5930422O12RikQ8C4Y4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
5930422O12RikQ8C4Y4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
5930422O12RikQ8C4Y4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
5930422O12RikQ8C4Y4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
5930422O12RikQ8C4Y4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
5930422O12RikQ8C4Y4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.3■■□□□ 1
5930422O12RikQ8C4Y4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
5930422O12RikQ8C4Y4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
5930422O12RikQ8C4Y4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.18■□□□□ 0.98
5930422O12RikQ8C4Y4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
5930422O12RikQ8C4Y4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
5930422O12RikQ8C4Y4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
5930422O12RikQ8C4Y4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
5930422O12RikQ8C4Y4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
5930422O12RikQ8C4Y4 Gm25239-201ENSMUST00000174915 86 ntBASIC21.09■□□□□ 0.97
5930422O12RikQ8C4Y4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
5930422O12RikQ8C4Y4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
5930422O12RikQ8C4Y4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
5930422O12RikQ8C4Y4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
5930422O12RikQ8C4Y4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
5930422O12RikQ8C4Y4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
5930422O12RikQ8C4Y4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
5930422O12RikQ8C4Y4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
5930422O12RikQ8C4Y4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
5930422O12RikQ8C4Y4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
5930422O12RikQ8C4Y4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
5930422O12RikQ8C4Y4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
5930422O12RikQ8C4Y4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
5930422O12RikQ8C4Y4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
5930422O12RikQ8C4Y4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
5930422O12RikQ8C4Y4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
5930422O12RikQ8C4Y4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
5930422O12RikQ8C4Y4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
5930422O12RikQ8C4Y4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
5930422O12RikQ8C4Y4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
5930422O12RikQ8C4Y4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.66■□□□□ 0.9
5930422O12RikQ8C4Y4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
5930422O12RikQ8C4Y4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
5930422O12RikQ8C4Y4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5930422O12RikQ8C4Y4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5930422O12RikQ8C4Y4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5930422O12RikQ8C4Y4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
5930422O12RikQ8C4Y4 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.52■□□□□ 0.88
5930422O12RikQ8C4Y4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
5930422O12RikQ8C4Y4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
5930422O12RikQ8C4Y4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
5930422O12RikQ8C4Y4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
5930422O12RikQ8C4Y4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
5930422O12RikQ8C4Y4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
5930422O12RikQ8C4Y4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.45■□□□□ 0.86
5930422O12RikQ8C4Y4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
5930422O12RikQ8C4Y4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
5930422O12RikQ8C4Y4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
5930422O12RikQ8C4Y4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms