RNA–Protein interactions for RNA: ENSMUST00000202769.1

Trim54-202, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Trim54, Length 1,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-202ENSMUST00000202769 Igkv8-26A0A075B5N5 123 aa9.53□□□□□ -0.88
Trim54-202ENSMUST00000202769 Ighv1-62-2A0A0A6YXZ4 119 aa9.52□□□□□ -0.89
Trim54-202ENSMUST00000202769 Gm10770F7D043 238 aa9.51□□□□□ -0.89
Trim54-202ENSMUST00000202769 Igkv1-117A0A140T8M0 119 aa9.5□□□□□ -0.89
Trim54-202ENSMUST00000202769 Gm5965D3Z724 196 aa9.5□□□□□ -0.89
Trim54-202ENSMUST00000202769 Glrp1E9Q9S8 174 aa9.5□□□□□ -0.89
Trim54-202ENSMUST00000202769 Lst1O08843 95 aa9.5□□□□□ -0.89
Trim54-202ENSMUST00000202769 Gm7276Q3TYW4 209 aa9.5□□□□□ -0.89
Trim54-202ENSMUST00000202769 Tac4Q99N14 128 aa9.5□□□□□ -0.89
Trim54-202ENSMUST00000202769 E130218I03RikA0A0U1RNU5 63 aa9.49□□□□□ -0.89
Trim54-202ENSMUST00000202769 P01843 105 aa9.49□□□□□ -0.89
Trim54-202ENSMUST00000202769 Cox7cP17665 63 aa9.48□□□□□ -0.89
Trim54-202ENSMUST00000202769 MalO09198 153 aa9.48□□□□□ -0.89
Trim54-202ENSMUST00000202769 Lage3Q9CR70 148 aa9.48□□□□□ -0.89
Trim54-202ENSMUST00000202769 Igkv3-10A0A0G2JGN0 119 aa9.47□□□□□ -0.89
Trim54-202ENSMUST00000202769 Cypt14J3QPF7 87 aa9.46□□□□□ -0.9
Trim54-202ENSMUST00000202769 Ccl25O35903 144 aa9.45□□□□□ -0.9
Trim54-202ENSMUST00000202769 BtcQ05928 177 aa9.45□□□□□ -0.9
Trim54-202ENSMUST00000202769 Elof1P60003 83 aa9.44□□□□□ -0.9
Trim54-202ENSMUST00000202769 Igkv1-122A0A140T8M9 119 aa9.43□□□□□ -0.9
Trim54-202ENSMUST00000202769 CckP09240 115 aa9.42□□□□□ -0.9
Trim54-202ENSMUST00000202769 Spaca4Q80ZQ0 127 aa9.42□□□□□ -0.9
Trim54-202ENSMUST00000202769 A930002H24RikQ8C8Y3 163 aa9.42□□□□□ -0.9
Trim54-202ENSMUST00000202769 Rpl32-psP17932 135 aa9.41□□□□□ -0.9
Trim54-202ENSMUST00000202769 Cystm1Q8K353 104 aa9.41□□□□□ -0.9
Trim54-202ENSMUST00000202769 Trav13n-2A0A0G2JF93 110 aa9.39□□□□□ -0.91
Trim54-202ENSMUST00000202769 Igkv4-58A0A0G2JGI6 119 aa9.39□□□□□ -0.91
Trim54-202ENSMUST00000202769 Gm7102J3QQ10 178 aa9.39□□□□□ -0.91
Trim54-202ENSMUST00000202769 Rab37Q9JKM7 223 aa9.39□□□□□ -0.91
Trim54-202ENSMUST00000202769 Vpreb1P13372 142 aa9.37□□□□□ -0.91
Trim54-202ENSMUST00000202769 Xlr5cQ9JJR2 179 aa9.37□□□□□ -0.91
Trim54-202ENSMUST00000202769 Tmem243B2RVB9 118 aa9.36□□□□□ -0.91
Trim54-202ENSMUST00000202769 Gm10320E9PW43 113 aa9.36□□□□□ -0.91
Trim54-202ENSMUST00000202769 Defb37Q7TMD2 62 aa9.36□□□□□ -0.91
Trim54-202ENSMUST00000202769 Gm5142Q8C5X9 133 aa9.36□□□□□ -0.91
Trim54-202ENSMUST00000202769 Hint1P70349 126 aaKnown RBP9.35□□□□□ -0.91
Trim54-202ENSMUST00000202769 Eif4ebp3Q80VV3 101 aa9.34□□□□□ -0.91
Trim54-202ENSMUST00000202769 Ube2v1Q9CZY3 147 aa9.34□□□□□ -0.91
Trim54-202ENSMUST00000202769 Rps29P62274 56 aa9.33□□□□□ -0.92
Trim54-202ENSMUST00000202769 SelenowP63300 88 aa9.33□□□□□ -0.92
Trim54-202ENSMUST00000202769 Dnal4Q9DCM4 105 aa9.33□□□□□ -0.92
Trim54-202ENSMUST00000202769 Vpreb3D3Z6J4 130 aa9.32□□□□□ -0.92
Trim54-202ENSMUST00000202769 Dph3Q8K0W9 82 aa9.31□□□□□ -0.92
Trim54-202ENSMUST00000202769 A0A286YE02 88 aa9.31□□□□□ -0.92
Trim54-202ENSMUST00000202769 Lamtor3O88653 124 aa9.31□□□□□ -0.92
Trim54-202ENSMUST00000202769 Defb29Q8BGW9 78 aa9.31□□□□□ -0.92
Trim54-202ENSMUST00000202769 Gm26602M0QWA4 95 aa9.3□□□□□ -0.92
Trim54-202ENSMUST00000202769 Gm5767A0A0J9YTU8 78 aa9.29□□□□□ -0.92
Trim54-202ENSMUST00000202769 MturnQ8CGA4 131 aa9.29□□□□□ -0.92
Trim54-202ENSMUST00000202769 Ighv10-1A0A0B4J1J6 119 aa9.27□□□□□ -0.93
Trim54-202ENSMUST00000202769 Spink13Q3UTS8 97 aa9.27□□□□□ -0.93
Trim54-202ENSMUST00000202769 Cdip1Q9DB75 208 aa9.27□□□□□ -0.93
Trim54-202ENSMUST00000202769 Smim26Q3V460 107 aa9.26□□□□□ -0.93
Trim54-202ENSMUST00000202769 NrepQ07475 68 aa9.24□□□□□ -0.93
Trim54-202ENSMUST00000202769 Defb47Q30KN1 79 aa9.24□□□□□ -0.93
Trim54-202ENSMUST00000202769 Gm2310J3QNJ2 377 aa9.23□□□□□ -0.93
Trim54-202ENSMUST00000202769 CenpwQ3URR0 86 aa9.23□□□□□ -0.93
Trim54-202ENSMUST00000202769 Gm29423A0A087WRM1 55 aa9.22□□□□□ -0.93
Trim54-202ENSMUST00000202769 Mtatp8P03930 67 aa9.22□□□□□ -0.93
Trim54-202ENSMUST00000202769 Cox6cQ9CPQ1 76 aa9.22□□□□□ -0.93
Trim54-202ENSMUST00000202769 A830005F24RikQ8BRT5 167 aa9.21□□□□□ -0.94
Trim54-202ENSMUST00000202769 Krtap1-3A2A588 173 aa9.2□□□□□ -0.94
Trim54-202ENSMUST00000202769 Gm16381A0A1Y7VKT9 73 aa9.19□□□□□ -0.94
Trim54-202ENSMUST00000202769 Gm21886J3QJU9 214 aa9.19□□□□□ -0.94
Trim54-202ENSMUST00000202769 Bud31Q6PGH1 103 aa9.19□□□□□ -0.94
Trim54-202ENSMUST00000202769 Rpl39lQ9CQD0 51 aa9.19□□□□□ -0.94
Trim54-202ENSMUST00000202769 Igkv3-4A0A140T8Q4 119 aa9.18□□□□□ -0.94
Trim54-202ENSMUST00000202769 Gm10401E9Q3K6 71 aa9.17□□□□□ -0.94
Trim54-202ENSMUST00000202769 Q8BT88 171 aa9.16□□□□□ -0.94
Trim54-202ENSMUST00000202769 Trav3-4A0A075B654 114 aa9.15□□□□□ -0.94
Trim54-202ENSMUST00000202769 Gm37389A0A0A6YW05 95 aa9.15□□□□□ -0.94
Trim54-202ENSMUST00000202769 Gm10135F6TEE5 83 aa9.15□□□□□ -0.94
Trim54-202ENSMUST00000202769 Gm26920S4R2A5 56 aa9.15□□□□□ -0.94
Trim54-202ENSMUST00000202769 Gm9821Q8K076 103 aa9.14□□□□□ -0.95
Trim54-202ENSMUST00000202769 Igkv1-35A0A0G2JDE5 120 aa9.12□□□□□ -0.95
Trim54-202ENSMUST00000202769 A730071L15RikQ8C4X0 137 aa9.11□□□□□ -0.95
Trim54-202ENSMUST00000202769 2310057N15RikQ9D6T8 200 aa9.11□□□□□ -0.95
Trim54-202ENSMUST00000202769 ZanO88799 5376 aa9.11□□□□□ -0.95
Trim54-202ENSMUST00000202769 Gm16253D3Z167 63 aa9.1□□□□□ -0.95
Trim54-202ENSMUST00000202769 Acyp1P56376 99 aa9.09□□□□□ -0.95
Trim54-202ENSMUST00000202769 4930535I16RikQ9CUI2 172 aa9.09□□□□□ -0.95
Trim54-202ENSMUST00000202769 P06320 134 aa9.08□□□□□ -0.96
Trim54-202ENSMUST00000202769 1700018G05RikA0A1B0GSI2 66 aa9.07□□□□□ -0.96
Trim54-202ENSMUST00000202769 4930524J08RikQ9CUJ5 163 aa9.07□□□□□ -0.96
Trim54-202ENSMUST00000202769 Igkv2-109A0A075B5K6 120 aa9.06□□□□□ -0.96
Trim54-202ENSMUST00000202769 1700020N15RikL7MTX3 112 aa9.06□□□□□ -0.96
Trim54-202ENSMUST00000202769 Fat4Q2PZL6 4981 aa9.06□□□□□ -0.96
Trim54-202ENSMUST00000202769 Gm11939A2A592 99 aa9.05□□□□□ -0.96
Trim54-202ENSMUST00000202769 Igkv8-21A0A140T8P7 120 aa9.05□□□□□ -0.96
Trim54-202ENSMUST00000202769 Chchd10Q7TNL9 138 aa9.05□□□□□ -0.96
Trim54-202ENSMUST00000202769 Sigmar1O55242 223 aa9.04□□□□□ -0.96
Trim54-202ENSMUST00000202769 Crct1Q6PAI5 102 aa9.04□□□□□ -0.96
Trim54-202ENSMUST00000202769 Krtap15-1Q9QZU5 150 aa9.03□□□□□ -0.96
Trim54-202ENSMUST00000202769 Sec61bQ9CQS8 96 aaKnown RBP9.02□□□□□ -0.97
Trim54-202ENSMUST00000202769 Pxt1Q8K459 51 aa9.01□□□□□ -0.97
Trim54-202ENSMUST00000202769 Cox6a2P43023 97 aa8.97□□□□□ -0.97
Trim54-202ENSMUST00000202769 9530003J23RikQ8BM26 151 aa8.97□□□□□ -0.97
Trim54-202ENSMUST00000202769 Vps25Q9CQ80 176 aa8.96□□□□□ -0.98
Trim54-202ENSMUST00000202769 Igkv8-28A0A0G2JE47 121 aa8.95□□□□□ -0.98
Trim54-202ENSMUST00000202769 Ifitm6A0A1B0GS75 124 aa8.95□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 65.6 ms