RNA–Protein interactions for RNA: ENSMUST00000202769.1

Trim54-202, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Trim54, Length 1,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-202ENSMUST00000202769 Gm35339A0A140LHH9 1649 aa38.14■■■■□ 3.7
Trim54-202ENSMUST00000202769 NischQ80TM9 1593 aa37.52■■■■□ 3.6
Trim54-202ENSMUST00000202769 Abcc8B2RUS7 1588 aa36.35■■■■□ 3.41
Trim54-202ENSMUST00000202769 Abcc9P70170 1546 aa36.33■■■■□ 3.41
Trim54-202ENSMUST00000202769 ScribQ80U72 1612 aa35.18■■■■□ 3.22
Trim54-202ENSMUST00000202769 NacadQ5SWP3 1504 aa33.98■■■■□ 3.03
Trim54-202ENSMUST00000202769 Kdm5dQ62240 1548 aa33.95■■■■□ 3.03
Trim54-202ENSMUST00000202769 Dcaf1Q80TR8 1506 aa33.39■■■□□ 2.94
Trim54-202ENSMUST00000202769 Sycp2Q9CUU3 1500 aa33.34■■■□□ 2.93
Trim54-202ENSMUST00000202769 BicraF8VPZ9 1578 aa32.93■■■□□ 2.86
Trim54-202ENSMUST00000202769 Rb1cc1Q9ESK9 1588 aa32.7■■■□□ 2.83
Trim54-202ENSMUST00000202769 Baz1aO88379 1555 aa32.22■■■□□ 2.75
Trim54-202ENSMUST00000202769 Dnajc5bQ9CQ94 199 aa32.2■■■□□ 2.75
Trim54-202ENSMUST00000202769 Ccdc180J3QNE4 1664 aa32.19■■■□□ 2.74
Trim54-202ENSMUST00000202769 Rhox8Q6VSS7 320 aa32.16■■■□□ 2.74
Trim54-202ENSMUST00000202769 Crybg2B7ZCC2 1516 aa32.08■■■□□ 2.73
Trim54-202ENSMUST00000202769 Pds5bQ4VA53 1446 aaKnown RBP31.98■■■□□ 2.71
Trim54-202ENSMUST00000202769 Thoc2B1AZI6 1594 aaKnown RBP31.84■■■□□ 2.69
Trim54-202ENSMUST00000202769 Zcchc6Q5BLK4 1491 aaKnown RBP31.75■■■□□ 2.67
Trim54-202ENSMUST00000202769 Atad2bE9Q166 1460 aaKnown RBP31.66■■■□□ 2.66
Trim54-202ENSMUST00000202769 Smarca4Q3TKT4 1613 aaKnown RBP31.37■■■□□ 2.61
Trim54-202ENSMUST00000202769 Ercc6F8VPZ5 1481 aa31.32■■■□□ 2.6
Trim54-202ENSMUST00000202769 Smarca2Q6DIC0 1577 aa31.31■■■□□ 2.6
Trim54-202ENSMUST00000202769 Cc2d2aQ8CFW7 1633 aa31.3■■■□□ 2.6
Trim54-202ENSMUST00000202769 Cecr2E9Q2Z1 1453 aa31.23■■■□□ 2.59
Trim54-202ENSMUST00000202769 Iqgap2Q3UQ44 1575 aa31.23■■■□□ 2.59
Trim54-202ENSMUST00000202769 Fam135aQ6NS59 1506 aa31.08■■■□□ 2.57
Trim54-202ENSMUST00000202769 Wdr62Q3U3T8 1523 aa30.98■■■□□ 2.55
Trim54-202ENSMUST00000202769 Frmpd1A2AKB4 1549 aa30.93■■■□□ 2.54
Trim54-202ENSMUST00000202769 Phldb1Q6PDH0 1371 aaKnown RBP30.76■■■□□ 2.51
Trim54-202ENSMUST00000202769 Baz1bQ9Z277 1479 aa30.67■■■□□ 2.5
Trim54-202ENSMUST00000202769 Rtl1Q7M732 1744 aa30.62■■■□□ 2.49
Trim54-202ENSMUST00000202769 Unc13aQ4KUS2 1712 aa30.54■■■□□ 2.48
Trim54-202ENSMUST00000202769 CftrP26361 1476 aa30.49■■■□□ 2.47
Trim54-202ENSMUST00000202769 Cttnbp2B9EJA2 1648 aa30.47■■■□□ 2.47
Trim54-202ENSMUST00000202769 Synj1Q8CHC4 1574 aa30.43■■■□□ 2.46
Trim54-202ENSMUST00000202769 Ubl4bQ9CQ84 188 aa30.42■■■□□ 2.46
Trim54-202ENSMUST00000202769 Brd4Q9ESU6 1400 aaKnown RBP30.34■■■□□ 2.45
Trim54-202ENSMUST00000202769 Mrc2Q64449 1479 aa30.32■■■□□ 2.44
Trim54-202ENSMUST00000202769 Ccdc136Q3TVA9 1136 aa30.13■■■□□ 2.41
Trim54-202ENSMUST00000202769 Esf1Q3V1V3 845 aaKnown RBP29.82■■■□□ 2.36
Trim54-202ENSMUST00000202769 Rsf1E9PWW9 1441 aaKnown RBP29.78■■■□□ 2.36
Trim54-202ENSMUST00000202769 Cux2P70298 1426 aa29.76■■■□□ 2.36
Trim54-202ENSMUST00000202769 Kif15Q6P9L6 1387 aa29.74■■■□□ 2.35
Trim54-202ENSMUST00000202769 Lrriq1Q0P5X1 1673 aa29.69■■■□□ 2.34
Trim54-202ENSMUST00000202769 Lamc3Q9R0B6 1581 aa29.65■■■□□ 2.34
Trim54-202ENSMUST00000202769 Trim41Q5NCC3 630 aa29.64■■■□□ 2.34
Trim54-202ENSMUST00000202769 Kif21aQ9QXL2 1672 aa29.61■■■□□ 2.33
Trim54-202ENSMUST00000202769 Npm1Q61937 292 aaKnown RBP29.37■■■□□ 2.29
Trim54-202ENSMUST00000202769 Cep164Q5DU05 1446 aa29.31■■■□□ 2.28
Trim54-202ENSMUST00000202769 TnnQ80Z71 1560 aa29.29■■■□□ 2.28
Trim54-202ENSMUST00000202769 Eif4g3Q80XI3 1579 aaKnown RBP29.28■■■□□ 2.28
Trim54-202ENSMUST00000202769 Top2bQ64511 1612 aa29.26■■■□□ 2.27
Trim54-202ENSMUST00000202769 Dnajc5P60904 198 aa29.25■■■□□ 2.27
Trim54-202ENSMUST00000202769 Golga3P55937 1487 aa29.23■■■□□ 2.27
Trim54-202ENSMUST00000202769 Ccdc18Q640L5 1455 aa29.17■■■□□ 2.26
Trim54-202ENSMUST00000202769 Dhx29Q6PGC1 1365 aaKnown RBP29.14■■■□□ 2.26
Trim54-202ENSMUST00000202769 Urb2E9Q7L1 1524 aaKnown RBP29.14■■■□□ 2.25
Trim54-202ENSMUST00000202769 Camsap1A2AHC3 1581 aa29.11■■■□□ 2.25
Trim54-202ENSMUST00000202769 Plb1Q3TTY0 1478 aa29.07■■■□□ 2.24
Trim54-202ENSMUST00000202769 Il27Q8K3I6 234 aa29.06■■■□□ 2.24
Trim54-202ENSMUST00000202769 LrpprcQ6PB66 1392 aaKnown RBP29.05■■■□□ 2.24
Trim54-202ENSMUST00000202769 Cngb1E1AZ71 1325 aa29.04■■■□□ 2.24
Trim54-202ENSMUST00000202769 Crocc2F6XLV1 1638 aa29.01■■■□□ 2.23
Trim54-202ENSMUST00000202769 Shroom2A2ALU4 1481 aa28.99■■■□□ 2.23
Trim54-202ENSMUST00000202769 Fmn1Q05860 1466 aa28.93■■■□□ 2.22
Trim54-202ENSMUST00000202769 PogzQ8BZH4 1409 aaKnown RBP28.88■■■□□ 2.21
Trim54-202ENSMUST00000202769 Ift140E9PY46 1464 aa28.8■■■□□ 2.2
Trim54-202ENSMUST00000202769 Rusc2Q80U22 1514 aa28.76■■■□□ 2.2
Trim54-202ENSMUST00000202769 Duox2A2AQ99 1517 aa28.74■■■□□ 2.19
Trim54-202ENSMUST00000202769 Grin2bQ01097 1482 aa28.68■■■□□ 2.18
Trim54-202ENSMUST00000202769 Col17a1Q07563 1470 aa28.59■■■□□ 2.17
Trim54-202ENSMUST00000202769 Disp1Q3TDN0 1521 aa28.59■■■□□ 2.17
Trim54-202ENSMUST00000202769 Pabpn1Q8CCS6 302 aaKnown RBP28.58■■■□□ 2.17
Trim54-202ENSMUST00000202769 Samd9lQ69Z37 1561 aa28.56■■■□□ 2.16
Trim54-202ENSMUST00000202769 Nup160Q9Z0W3 1402 aaKnown RBP28.48■■■□□ 2.15
Trim54-202ENSMUST00000202769 Pbrm1Q8BSQ9 1634 aaKnown RBP28.48■■■□□ 2.15
Trim54-202ENSMUST00000202769 Efcab5A0JP43 1406 aa28.46■■■□□ 2.15
Trim54-202ENSMUST00000202769 Setd1bQ8CFT2 1985 aa28.46■■■□□ 2.15
Trim54-202ENSMUST00000202769 Ccdc88bQ4QRL3 1481 aa28.42■■■□□ 2.14
Trim54-202ENSMUST00000202769 Cc2d2bA0A286YDU8 1405 aa28.4■■■□□ 2.14
Trim54-202ENSMUST00000202769 Pelp1Q9DBD5 1123 aaKnown RBP28.39■■■□□ 2.14
Trim54-202ENSMUST00000202769 Top2aQ01320 1528 aaKnown RBP28.37■■■□□ 2.13
Trim54-202ENSMUST00000202769 Rad54l2Q99NG0 1466 aa28.33■■■□□ 2.13
Trim54-202ENSMUST00000202769 NrkQ9R0G8 1455 aa28.31■■■□□ 2.12
Trim54-202ENSMUST00000202769 Zcchc11B2RX14 1644 aaKnown RBP28.29■■■□□ 2.12
Trim54-202ENSMUST00000202769 Magi3Q9EQJ9 1476 aa28.29■■■□□ 2.12
Trim54-202ENSMUST00000202769 Grin2aP35436 1464 aa28.28■■■□□ 2.12
Trim54-202ENSMUST00000202769 AqrQ8CFQ3 1481 aaKnown RBP28.23■■■□□ 2.11
Trim54-202ENSMUST00000202769 Shroom4Q1W617 1475 aa28.18■■■□□ 2.1
Trim54-202ENSMUST00000202769 PtprkP35822 1457 aa28.17■■■□□ 2.1
Trim54-202ENSMUST00000202769 Gpatch8A2A6A1 1505 aa28.15■■■□□ 2.1
Trim54-202ENSMUST00000202769 Chic1Q8CBW7 227 aa28.14■■■□□ 2.1
Trim54-202ENSMUST00000202769 Fgd6Q69ZL1 1399 aa28.12■■■□□ 2.09
Trim54-202ENSMUST00000202769 Pla2r1Q62028 1487 aa28.11■■■□□ 2.09
Trim54-202ENSMUST00000202769 SynmQ70IV5 1561 aa28.1■■■□□ 2.09
Trim54-202ENSMUST00000202769 Adgrl3Q80TS3 1537 aa27.99■■■□□ 2.07
Trim54-202ENSMUST00000202769 Cep170Q6A065 1588 aa27.99■■■□□ 2.07
Trim54-202ENSMUST00000202769 Gapvd1Q6PAR5 1458 aa27.97■■■□□ 2.07
Trim54-202ENSMUST00000202769 AknaQ80VW7 1404 aa27.92■■■□□ 2.06
Retrieved 100 of 22,080 RNA–protein pairs in 149.3 ms