RNA–Protein interactions for RNA: ENSMUST00000202769.1

Trim54-202, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Trim54, Length 1,408 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-202ENSMUST00000202769 Gm35339A0A140LHH9 1649 aa38.14■■■■□ 3.7
Trim54-202ENSMUST00000202769 NischQ80TM9 1593 aa37.52■■■■□ 3.6
Trim54-202ENSMUST00000202769 Abcc8B2RUS7 1588 aa36.35■■■■□ 3.41
Trim54-202ENSMUST00000202769 Abcc9P70170 1546 aa36.33■■■■□ 3.41
Trim54-202ENSMUST00000202769 ScribQ80U72 1612 aa35.18■■■■□ 3.22
Trim54-202ENSMUST00000202769 NacadQ5SWP3 1504 aa33.98■■■■□ 3.03
Trim54-202ENSMUST00000202769 Kdm5dQ62240 1548 aa33.95■■■■□ 3.03
Trim54-202ENSMUST00000202769 Dcaf1Q80TR8 1506 aa33.39■■■□□ 2.94
Trim54-202ENSMUST00000202769 Sycp2Q9CUU3 1500 aa33.34■■■□□ 2.93
Trim54-202ENSMUST00000202769 BicraF8VPZ9 1578 aa32.93■■■□□ 2.86
Trim54-202ENSMUST00000202769 Rb1cc1Q9ESK9 1588 aa32.7■■■□□ 2.83
Trim54-202ENSMUST00000202769 Baz1aO88379 1555 aa32.22■■■□□ 2.75
Trim54-202ENSMUST00000202769 Dnajc5bQ9CQ94 199 aa32.2■■■□□ 2.75
Trim54-202ENSMUST00000202769 Ccdc180J3QNE4 1664 aa32.19■■■□□ 2.74
Trim54-202ENSMUST00000202769 Rhox8Q6VSS7 320 aa32.16■■■□□ 2.74
Trim54-202ENSMUST00000202769 Crybg2B7ZCC2 1516 aa32.08■■■□□ 2.73
Trim54-202ENSMUST00000202769 Pds5bQ4VA53 1446 aaKnown RBP31.98■■■□□ 2.71
Trim54-202ENSMUST00000202769 Thoc2B1AZI6 1594 aaKnown RBP31.84■■■□□ 2.69
Trim54-202ENSMUST00000202769 Zcchc6Q5BLK4 1491 aaKnown RBP31.75■■■□□ 2.67
Trim54-202ENSMUST00000202769 Atad2bE9Q166 1460 aaKnown RBP31.66■■■□□ 2.66
Trim54-202ENSMUST00000202769 Smarca4Q3TKT4 1613 aaKnown RBP31.37■■■□□ 2.61
Trim54-202ENSMUST00000202769 Ercc6F8VPZ5 1481 aa31.32■■■□□ 2.6
Trim54-202ENSMUST00000202769 Smarca2Q6DIC0 1577 aa31.31■■■□□ 2.6
Trim54-202ENSMUST00000202769 Cc2d2aQ8CFW7 1633 aa31.3■■■□□ 2.6
Trim54-202ENSMUST00000202769 Cecr2E9Q2Z1 1453 aa31.23■■■□□ 2.59
Trim54-202ENSMUST00000202769 Iqgap2Q3UQ44 1575 aa31.23■■■□□ 2.59
Trim54-202ENSMUST00000202769 Fam135aQ6NS59 1506 aa31.08■■■□□ 2.57
Trim54-202ENSMUST00000202769 Wdr62Q3U3T8 1523 aa30.98■■■□□ 2.55
Trim54-202ENSMUST00000202769 Frmpd1A2AKB4 1549 aa30.93■■■□□ 2.54
Trim54-202ENSMUST00000202769 Phldb1Q6PDH0 1371 aaKnown RBP30.76■■■□□ 2.51
Trim54-202ENSMUST00000202769 Baz1bQ9Z277 1479 aa30.67■■■□□ 2.5
Trim54-202ENSMUST00000202769 Rtl1Q7M732 1744 aa30.62■■■□□ 2.49
Trim54-202ENSMUST00000202769 Unc13aQ4KUS2 1712 aa30.54■■■□□ 2.48
Trim54-202ENSMUST00000202769 CftrP26361 1476 aa30.49■■■□□ 2.47
Trim54-202ENSMUST00000202769 Cttnbp2B9EJA2 1648 aa30.47■■■□□ 2.47
Trim54-202ENSMUST00000202769 Synj1Q8CHC4 1574 aa30.43■■■□□ 2.46
Trim54-202ENSMUST00000202769 Ubl4bQ9CQ84 188 aa30.42■■■□□ 2.46
Trim54-202ENSMUST00000202769 Brd4Q9ESU6 1400 aaKnown RBP30.34■■■□□ 2.45
Trim54-202ENSMUST00000202769 Mrc2Q64449 1479 aa30.32■■■□□ 2.44
Trim54-202ENSMUST00000202769 Ccdc136Q3TVA9 1136 aa30.13■■■□□ 2.41
Trim54-202ENSMUST00000202769 Esf1Q3V1V3 845 aaKnown RBP29.82■■■□□ 2.36
Trim54-202ENSMUST00000202769 Rsf1E9PWW9 1441 aaKnown RBP29.78■■■□□ 2.36
Trim54-202ENSMUST00000202769 Cux2P70298 1426 aa29.76■■■□□ 2.36
Trim54-202ENSMUST00000202769 Kif15Q6P9L6 1387 aa29.74■■■□□ 2.35
Trim54-202ENSMUST00000202769 Lrriq1Q0P5X1 1673 aa29.69■■■□□ 2.34
Trim54-202ENSMUST00000202769 Lamc3Q9R0B6 1581 aa29.65■■■□□ 2.34
Trim54-202ENSMUST00000202769 Trim41Q5NCC3 630 aa29.64■■■□□ 2.34
Trim54-202ENSMUST00000202769 Kif21aQ9QXL2 1672 aa29.61■■■□□ 2.33
Trim54-202ENSMUST00000202769 Npm1Q61937 292 aaKnown RBP29.37■■■□□ 2.29
Trim54-202ENSMUST00000202769 Cep164Q5DU05 1446 aa29.31■■■□□ 2.28
Trim54-202ENSMUST00000202769 TnnQ80Z71 1560 aa29.29■■■□□ 2.28
Trim54-202ENSMUST00000202769 Eif4g3Q80XI3 1579 aaKnown RBP29.28■■■□□ 2.28
Trim54-202ENSMUST00000202769 Top2bQ64511 1612 aa29.26■■■□□ 2.27
Trim54-202ENSMUST00000202769 Dnajc5P60904 198 aa29.25■■■□□ 2.27
Trim54-202ENSMUST00000202769 Golga3P55937 1487 aa29.23■■■□□ 2.27
Trim54-202ENSMUST00000202769 Ccdc18Q640L5 1455 aa29.17■■■□□ 2.26
Trim54-202ENSMUST00000202769 Dhx29Q6PGC1 1365 aaKnown RBP29.14■■■□□ 2.26
Trim54-202ENSMUST00000202769 Urb2E9Q7L1 1524 aaKnown RBP29.14■■■□□ 2.25
Trim54-202ENSMUST00000202769 Camsap1A2AHC3 1581 aa29.11■■■□□ 2.25
Trim54-202ENSMUST00000202769 Plb1Q3TTY0 1478 aa29.07■■■□□ 2.24
Trim54-202ENSMUST00000202769 Il27Q8K3I6 234 aa29.06■■■□□ 2.24
Trim54-202ENSMUST00000202769 LrpprcQ6PB66 1392 aaKnown RBP29.05■■■□□ 2.24
Trim54-202ENSMUST00000202769 Cngb1E1AZ71 1325 aa29.04■■■□□ 2.24
Trim54-202ENSMUST00000202769 Crocc2F6XLV1 1638 aa29.01■■■□□ 2.23
Trim54-202ENSMUST00000202769 Shroom2A2ALU4 1481 aa28.99■■■□□ 2.23
Trim54-202ENSMUST00000202769 Fmn1Q05860 1466 aa28.93■■■□□ 2.22
Trim54-202ENSMUST00000202769 PogzQ8BZH4 1409 aaKnown RBP28.88■■■□□ 2.21
Trim54-202ENSMUST00000202769 Ift140E9PY46 1464 aa28.8■■■□□ 2.2
Trim54-202ENSMUST00000202769 Rusc2Q80U22 1514 aa28.76■■■□□ 2.2
Trim54-202ENSMUST00000202769 Duox2A2AQ99 1517 aa28.74■■■□□ 2.19
Trim54-202ENSMUST00000202769 Grin2bQ01097 1482 aa28.68■■■□□ 2.18
Trim54-202ENSMUST00000202769 Col17a1Q07563 1470 aa28.59■■■□□ 2.17
Trim54-202ENSMUST00000202769 Disp1Q3TDN0 1521 aa28.59■■■□□ 2.17
Trim54-202ENSMUST00000202769 Pabpn1Q8CCS6 302 aaKnown RBP28.58■■■□□ 2.17
Trim54-202ENSMUST00000202769 Samd9lQ69Z37 1561 aa28.56■■■□□ 2.16
Trim54-202ENSMUST00000202769 Nup160Q9Z0W3 1402 aaKnown RBP28.48■■■□□ 2.15
Trim54-202ENSMUST00000202769 Pbrm1Q8BSQ9 1634 aaKnown RBP28.48■■■□□ 2.15
Trim54-202ENSMUST00000202769 Efcab5A0JP43 1406 aa28.46■■■□□ 2.15
Trim54-202ENSMUST00000202769 Setd1bQ8CFT2 1985 aa28.46■■■□□ 2.15
Trim54-202ENSMUST00000202769 Ccdc88bQ4QRL3 1481 aa28.42■■■□□ 2.14
Trim54-202ENSMUST00000202769 Cc2d2bA0A286YDU8 1405 aa28.4■■■□□ 2.14
Trim54-202ENSMUST00000202769 Pelp1Q9DBD5 1123 aaKnown RBP28.39■■■□□ 2.14
Trim54-202ENSMUST00000202769 Top2aQ01320 1528 aaKnown RBP28.37■■■□□ 2.13
Trim54-202ENSMUST00000202769 Rad54l2Q99NG0 1466 aa28.33■■■□□ 2.13
Trim54-202ENSMUST00000202769 NrkQ9R0G8 1455 aa28.31■■■□□ 2.12
Trim54-202ENSMUST00000202769 Zcchc11B2RX14 1644 aaKnown RBP28.29■■■□□ 2.12
Trim54-202ENSMUST00000202769 Magi3Q9EQJ9 1476 aa28.29■■■□□ 2.12
Trim54-202ENSMUST00000202769 Grin2aP35436 1464 aa28.28■■■□□ 2.12
Trim54-202ENSMUST00000202769 AqrQ8CFQ3 1481 aaKnown RBP28.23■■■□□ 2.11
Trim54-202ENSMUST00000202769 Shroom4Q1W617 1475 aa28.18■■■□□ 2.1
Trim54-202ENSMUST00000202769 PtprkP35822 1457 aa28.17■■■□□ 2.1
Trim54-202ENSMUST00000202769 Gpatch8A2A6A1 1505 aa28.15■■■□□ 2.1
Trim54-202ENSMUST00000202769 Chic1Q8CBW7 227 aa28.14■■■□□ 2.1
Trim54-202ENSMUST00000202769 Fgd6Q69ZL1 1399 aa28.12■■■□□ 2.09
Trim54-202ENSMUST00000202769 Pla2r1Q62028 1487 aa28.11■■■□□ 2.09
Trim54-202ENSMUST00000202769 SynmQ70IV5 1561 aa28.1■■■□□ 2.09
Trim54-202ENSMUST00000202769 Adgrl3Q80TS3 1537 aa27.99■■■□□ 2.07
Trim54-202ENSMUST00000202769 Cep170Q6A065 1588 aa27.99■■■□□ 2.07
Trim54-202ENSMUST00000202769 Gapvd1Q6PAR5 1458 aa27.97■■■□□ 2.07
Trim54-202ENSMUST00000202769 AknaQ80VW7 1404 aa27.92■■■□□ 2.06
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms