RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Trav13n-2A0A0G2JF93 110 aa9.56□□□□□ -0.88
Tpm1-215ENSMUST00000113705 Igkv3-5A0A140T8M6 119 aa9.56□□□□□ -0.88
Tpm1-215ENSMUST00000113705 Tac4Q99N14 128 aa9.55□□□□□ -0.88
Tpm1-215ENSMUST00000113705 Gm10770F7D043 238 aa9.54□□□□□ -0.88
Tpm1-215ENSMUST00000113705 Odf3bQ5M8M2 238 aa9.54□□□□□ -0.88
Tpm1-215ENSMUST00000113705 Igkv8-26A0A075B5N5 123 aa9.53□□□□□ -0.88
Tpm1-215ENSMUST00000113705 Igkv1-122A0A140T8M9 119 aa9.53□□□□□ -0.88
Tpm1-215ENSMUST00000113705 Gm10139O88245 57 aa9.52□□□□□ -0.88
Tpm1-215ENSMUST00000113705 Eif4ebp3Q80VV3 101 aa9.52□□□□□ -0.88
Tpm1-215ENSMUST00000113705 Igkv4-58A0A0G2JGI6 119 aa9.52□□□□□ -0.89
Tpm1-215ENSMUST00000113705 SelenowP63300 88 aa9.51□□□□□ -0.89
Tpm1-215ENSMUST00000113705 Gm7276Q3TYW4 209 aa9.5□□□□□ -0.89
Tpm1-215ENSMUST00000113705 Defa25Q5G864 92 aa9.5□□□□□ -0.89
Tpm1-215ENSMUST00000113705 Defb29Q8BGW9 78 aa9.5□□□□□ -0.89
Tpm1-215ENSMUST00000113705 Znf706Q9D115 76 aaKnown RBP9.5□□□□□ -0.89
Tpm1-215ENSMUST00000113705 Dnal4Q9DCM4 105 aa9.5□□□□□ -0.89
Tpm1-215ENSMUST00000113705 CckP09240 115 aa9.49□□□□□ -0.89
Tpm1-215ENSMUST00000113705 Elof1P60003 83 aa9.49□□□□□ -0.89
Tpm1-215ENSMUST00000113705 Gm5142Q8C5X9 133 aa9.49□□□□□ -0.89
Tpm1-215ENSMUST00000113705 Gm28230A0A0A0MQ91 144 aa9.48□□□□□ -0.89
Tpm1-215ENSMUST00000113705 2210017I01RikA0A0A6YVV1 95 aa9.48□□□□□ -0.89
Tpm1-215ENSMUST00000113705 Ccl25O35903 144 aa9.48□□□□□ -0.89
Tpm1-215ENSMUST00000113705 Defb37Q7TMD2 62 aa9.47□□□□□ -0.89
Tpm1-215ENSMUST00000113705 Rab37Q9JKM7 223 aa9.46□□□□□ -0.9
Tpm1-215ENSMUST00000113705 Gm10320E9PW43 113 aa9.45□□□□□ -0.9
Tpm1-215ENSMUST00000113705 Ube2v1Q9CZY3 147 aa9.45□□□□□ -0.9
Tpm1-215ENSMUST00000113705 Rpl32-psP17932 135 aa9.45□□□□□ -0.9
Tpm1-215ENSMUST00000113705 Ush2AQ2QI47 5193 aa9.45□□□□□ -0.9
Tpm1-215ENSMUST00000113705 Tmem243B2RVB9 118 aa9.44□□□□□ -0.9
Tpm1-215ENSMUST00000113705 Xlr5cQ9JJR2 179 aa9.44□□□□□ -0.9
Tpm1-215ENSMUST00000113705 Igkv3-10A0A0G2JGN0 119 aa9.43□□□□□ -0.9
Tpm1-215ENSMUST00000113705 Hint1P70349 126 aaKnown RBP9.42□□□□□ -0.9
Tpm1-215ENSMUST00000113705 MturnQ8CGA4 131 aa9.42□□□□□ -0.9
Tpm1-215ENSMUST00000113705 A930033H14RikG5E8X6 103 aa9.41□□□□□ -0.9
Tpm1-215ENSMUST00000113705 A930002H24RikQ8C8Y3 163 aa9.41□□□□□ -0.9
Tpm1-215ENSMUST00000113705 A0A286YE02 88 aa9.4□□□□□ -0.9
Tpm1-215ENSMUST00000113705 Gm26602M0QWA4 95 aa9.4□□□□□ -0.91
Tpm1-215ENSMUST00000113705 Smim26Q3V460 107 aa9.4□□□□□ -0.91
Tpm1-215ENSMUST00000113705 Spink13Q3UTS8 97 aa9.38□□□□□ -0.91
Tpm1-215ENSMUST00000113705 Ighv10-1A0A0B4J1J6 119 aa9.37□□□□□ -0.91
Tpm1-215ENSMUST00000113705 Vpreb3D3Z6J4 130 aa9.37□□□□□ -0.91
Tpm1-215ENSMUST00000113705 Cypt14J3QPF7 87 aa9.37□□□□□ -0.91
Tpm1-215ENSMUST00000113705 Prm1P02319 51 aa9.37□□□□□ -0.91
Tpm1-215ENSMUST00000113705 Spaca4Q80ZQ0 127 aa9.35□□□□□ -0.91
Tpm1-215ENSMUST00000113705 Rpl39lQ9CQD0 51 aa9.35□□□□□ -0.91
Tpm1-215ENSMUST00000113705 Gm7735D3YX18 52 aa9.35□□□□□ -0.91
Tpm1-215ENSMUST00000113705 Bud31Q6PGH1 103 aa9.35□□□□□ -0.91
Tpm1-215ENSMUST00000113705 Igkv1-35A0A0G2JDE5 120 aa9.34□□□□□ -0.91
Tpm1-215ENSMUST00000113705 Gm17689B3GLJ4 109 aa9.34□□□□□ -0.91
Tpm1-215ENSMUST00000113705 Defb47Q30KN1 79 aa9.34□□□□□ -0.91
Tpm1-215ENSMUST00000113705 Mtatp8P03930 67 aa9.32□□□□□ -0.92
Tpm1-215ENSMUST00000113705 NrepQ07475 68 aa9.32□□□□□ -0.92
Tpm1-215ENSMUST00000113705 GhrhP16043 103 aa9.31□□□□□ -0.92
Tpm1-215ENSMUST00000113705 CenpwQ3URR0 86 aa9.3□□□□□ -0.92
Tpm1-215ENSMUST00000113705 Dph3Q8K0W9 82 aa9.3□□□□□ -0.92
Tpm1-215ENSMUST00000113705 Lamtor3O88653 124 aa9.29□□□□□ -0.92
Tpm1-215ENSMUST00000113705 Vpreb1P13372 142 aa9.29□□□□□ -0.92
Tpm1-215ENSMUST00000113705 Gm29423A0A087WRM1 55 aa9.29□□□□□ -0.92
Tpm1-215ENSMUST00000113705 Hmcn2A2AJ76 5100 aa9.28□□□□□ -0.92
Tpm1-215ENSMUST00000113705 Gm16381A0A1Y7VKT9 73 aa9.28□□□□□ -0.92
Tpm1-215ENSMUST00000113705 Ubr4A2AN08 5180 aa9.28□□□□□ -0.92
Tpm1-215ENSMUST00000113705 Gm9789Q8BIG3 52 aa9.28□□□□□ -0.92
Tpm1-215ENSMUST00000113705 4932415D10RikA0A1W2P6U8 4986 aa9.27□□□□□ -0.93
Tpm1-215ENSMUST00000113705 Trav3-4A0A075B654 114 aa9.27□□□□□ -0.93
Tpm1-215ENSMUST00000113705 Gm5965D3Z724 196 aa9.27□□□□□ -0.93
Tpm1-215ENSMUST00000113705 Igkv2-109A0A075B5K6 120 aa9.26□□□□□ -0.93
Tpm1-215ENSMUST00000113705 Gm10135F6TEE5 83 aa9.26□□□□□ -0.93
Tpm1-215ENSMUST00000113705 Cox6cQ9CPQ1 76 aa9.26□□□□□ -0.93
Tpm1-215ENSMUST00000113705 Gm26920S4R2A5 56 aa9.25□□□□□ -0.93
Tpm1-215ENSMUST00000113705 Gm37389A0A0A6YW05 95 aa9.24□□□□□ -0.93
Tpm1-215ENSMUST00000113705 Gm10401E9Q3K6 71 aa9.24□□□□□ -0.93
Tpm1-215ENSMUST00000113705 Krtap4-1Q3UUY3 169 aa9.22□□□□□ -0.93
Tpm1-215ENSMUST00000113705 A830005F24RikQ8BRT5 167 aa9.22□□□□□ -0.93
Tpm1-215ENSMUST00000113705 Sigmar1O55242 223 aa9.21□□□□□ -0.94
Tpm1-215ENSMUST00000113705 Q8BT88 171 aa9.2□□□□□ -0.94
Tpm1-215ENSMUST00000113705 Igkv3-4A0A140T8Q4 119 aa9.19□□□□□ -0.94
Tpm1-215ENSMUST00000113705 Gm20604F8WIA3 75 aa9.18□□□□□ -0.94
Tpm1-215ENSMUST00000113705 P06320 134 aa9.17□□□□□ -0.94
Tpm1-215ENSMUST00000113705 1700018G05RikA0A1B0GSI2 66 aa9.16□□□□□ -0.94
Tpm1-215ENSMUST00000113705 Gm21886J3QJU9 214 aa9.14□□□□□ -0.95
Tpm1-215ENSMUST00000113705 1700020N15RikL7MTX3 112 aa9.14□□□□□ -0.95
Tpm1-215ENSMUST00000113705 4930524J08RikQ9CUJ5 163 aa9.14□□□□□ -0.95
Tpm1-215ENSMUST00000113705 Vps25Q9CQ80 176 aa9.14□□□□□ -0.95
Tpm1-215ENSMUST00000113705 Acyp1P56376 99 aa9.13□□□□□ -0.95
Tpm1-215ENSMUST00000113705 Pxt1Q8K459 51 aa9.12□□□□□ -0.95
Tpm1-215ENSMUST00000113705 9530003J23RikQ8BM26 151 aa9.11□□□□□ -0.95
Tpm1-215ENSMUST00000113705 Rps29P62274 56 aa9.1□□□□□ -0.95
Tpm1-215ENSMUST00000113705 Sfta2E9PXB6 77 aa9.09□□□□□ -0.95
Tpm1-215ENSMUST00000113705 Gm2310J3QNJ2 377 aa9.09□□□□□ -0.95
Tpm1-215ENSMUST00000113705 Cox6a2P43023 97 aa9.07□□□□□ -0.96
Tpm1-215ENSMUST00000113705 A730071L15RikQ8C4X0 137 aa9.07□□□□□ -0.96
Tpm1-215ENSMUST00000113705 Ifitm6A0A1B0GS75 124 aa9.07□□□□□ -0.96
Tpm1-215ENSMUST00000113705 Gm5767A0A0J9YTU8 78 aa9.06□□□□□ -0.96
Tpm1-215ENSMUST00000113705 Chchd10Q7TNL9 138 aa9.06□□□□□ -0.96
Tpm1-215ENSMUST00000113705 Cystm1Q8K353 104 aa9.06□□□□□ -0.96
Tpm1-215ENSMUST00000113705 Gm7102J3QQ10 178 aa9.04□□□□□ -0.96
Tpm1-215ENSMUST00000113705 Gm16253D3Z167 63 aa9.04□□□□□ -0.96
Tpm1-215ENSMUST00000113705 Igkv8-21A0A140T8P7 120 aa9.02□□□□□ -0.97
Tpm1-215ENSMUST00000113705 Gtf2h5Q8K2X8 71 aa9□□□□□ -0.97
Tpm1-215ENSMUST00000113705 Gm45213A0A0U1RNZ6 101 aa8.99□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms