RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Gm35339A0A140LHH9 1649 aa36.39■■■■□ 3.42
Tpm1-215ENSMUST00000113705 NischQ80TM9 1593 aa36.02■■■■□ 3.36
Tpm1-215ENSMUST00000113705 Abcc9P70170 1546 aa34.86■■■■□ 3.17
Tpm1-215ENSMUST00000113705 Abcc8B2RUS7 1588 aa34.77■■■■□ 3.16
Tpm1-215ENSMUST00000113705 ScribQ80U72 1612 aa33.52■■■□□ 2.96
Tpm1-215ENSMUST00000113705 Kdm5dQ62240 1548 aa32.44■■■□□ 2.78
Tpm1-215ENSMUST00000113705 NacadQ5SWP3 1504 aa32.4■■■□□ 2.78
Tpm1-215ENSMUST00000113705 Dcaf1Q80TR8 1506 aa31.93■■■□□ 2.7
Tpm1-215ENSMUST00000113705 Sycp2Q9CUU3 1500 aa31.78■■■□□ 2.68
Tpm1-215ENSMUST00000113705 Rb1cc1Q9ESK9 1588 aa31.45■■■□□ 2.62
Tpm1-215ENSMUST00000113705 BicraF8VPZ9 1578 aa31.36■■■□□ 2.61
Tpm1-215ENSMUST00000113705 Rhox8Q6VSS7 320 aa31.35■■■□□ 2.61
Tpm1-215ENSMUST00000113705 Baz1aO88379 1555 aa30.95■■■□□ 2.55
Tpm1-215ENSMUST00000113705 Ccdc180J3QNE4 1664 aa30.84■■■□□ 2.53
Tpm1-215ENSMUST00000113705 Crybg2B7ZCC2 1516 aa30.68■■■□□ 2.5
Tpm1-215ENSMUST00000113705 Zcchc6Q5BLK4 1491 aaKnown RBP30.58■■■□□ 2.49
Tpm1-215ENSMUST00000113705 Dnajc5bQ9CQ94 199 aa30.4■■■□□ 2.46
Tpm1-215ENSMUST00000113705 Pds5bQ4VA53 1446 aaKnown RBP30.39■■■□□ 2.46
Tpm1-215ENSMUST00000113705 Thoc2B1AZI6 1594 aaKnown RBP30.15■■■□□ 2.42
Tpm1-215ENSMUST00000113705 Atad2bE9Q166 1460 aaKnown RBP30.13■■■□□ 2.41
Tpm1-215ENSMUST00000113705 Smarca2Q6DIC0 1577 aa30.07■■■□□ 2.4
Tpm1-215ENSMUST00000113705 Cecr2E9Q2Z1 1453 aa29.98■■■□□ 2.39
Tpm1-215ENSMUST00000113705 Smarca4Q3TKT4 1613 aaKnown RBP29.98■■■□□ 2.39
Tpm1-215ENSMUST00000113705 Iqgap2Q3UQ44 1575 aa29.83■■■□□ 2.37
Tpm1-215ENSMUST00000113705 Ercc6F8VPZ5 1481 aa29.82■■■□□ 2.36
Tpm1-215ENSMUST00000113705 Cc2d2aQ8CFW7 1633 aa29.71■■■□□ 2.35
Tpm1-215ENSMUST00000113705 Rtl1Q7M732 1744 aa29.71■■■□□ 2.35
Tpm1-215ENSMUST00000113705 Wdr62Q3U3T8 1523 aa29.53■■■□□ 2.32
Tpm1-215ENSMUST00000113705 Frmpd1A2AKB4 1549 aa29.49■■■□□ 2.31
Tpm1-215ENSMUST00000113705 Fam135aQ6NS59 1506 aa29.47■■■□□ 2.31
Tpm1-215ENSMUST00000113705 Ccdc136Q3TVA9 1136 aa29.33■■■□□ 2.29
Tpm1-215ENSMUST00000113705 Synj1Q8CHC4 1574 aa29.28■■■□□ 2.28
Tpm1-215ENSMUST00000113705 CftrP26361 1476 aa29.27■■■□□ 2.28
Tpm1-215ENSMUST00000113705 Phldb1Q6PDH0 1371 aaKnown RBP29.26■■■□□ 2.27
Tpm1-215ENSMUST00000113705 Cttnbp2B9EJA2 1648 aa29.25■■■□□ 2.27
Tpm1-215ENSMUST00000113705 Brd4Q9ESU6 1400 aaKnown RBP29.21■■■□□ 2.27
Tpm1-215ENSMUST00000113705 Unc13aQ4KUS2 1712 aa29.15■■■□□ 2.26
Tpm1-215ENSMUST00000113705 Ubl4bQ9CQ84 188 aa29.03■■■□□ 2.24
Tpm1-215ENSMUST00000113705 Baz1bQ9Z277 1479 aa28.96■■■□□ 2.23
Tpm1-215ENSMUST00000113705 Esf1Q3V1V3 845 aaKnown RBP28.83■■■□□ 2.21
Tpm1-215ENSMUST00000113705 Mrc2Q64449 1479 aa28.8■■■□□ 2.2
Tpm1-215ENSMUST00000113705 Trim41Q5NCC3 630 aa28.73■■■□□ 2.19
Tpm1-215ENSMUST00000113705 Rsf1E9PWW9 1441 aaKnown RBP28.54■■■□□ 2.16
Tpm1-215ENSMUST00000113705 Kif15Q6P9L6 1387 aa28.52■■■□□ 2.16
Tpm1-215ENSMUST00000113705 Cux2P70298 1426 aa28.46■■■□□ 2.15
Tpm1-215ENSMUST00000113705 Lamc3Q9R0B6 1581 aa28.37■■■□□ 2.13
Tpm1-215ENSMUST00000113705 Kif21aQ9QXL2 1672 aa28.26■■■□□ 2.11
Tpm1-215ENSMUST00000113705 Cngb1E1AZ71 1325 aa28.25■■■□□ 2.11
Tpm1-215ENSMUST00000113705 Golga3P55937 1487 aa28.24■■■□□ 2.11
Tpm1-215ENSMUST00000113705 Lrriq1Q0P5X1 1673 aa28.21■■■□□ 2.11
Tpm1-215ENSMUST00000113705 Top2bQ64511 1612 aa28.2■■■□□ 2.11
Tpm1-215ENSMUST00000113705 Npm1Q61937 292 aaKnown RBP28.14■■■□□ 2.1
Tpm1-215ENSMUST00000113705 TnnQ80Z71 1560 aa28.1■■■□□ 2.09
Tpm1-215ENSMUST00000113705 Cep164Q5DU05 1446 aa28.04■■■□□ 2.08
Tpm1-215ENSMUST00000113705 Il27Q8K3I6 234 aa28.04■■■□□ 2.08
Tpm1-215ENSMUST00000113705 Ccdc18Q640L5 1455 aa27.98■■■□□ 2.07
Tpm1-215ENSMUST00000113705 Camsap1A2AHC3 1581 aa27.93■■■□□ 2.06
Tpm1-215ENSMUST00000113705 Fmn1Q05860 1466 aa27.89■■■□□ 2.06
Tpm1-215ENSMUST00000113705 Dhx29Q6PGC1 1365 aaKnown RBP27.86■■■□□ 2.05
Tpm1-215ENSMUST00000113705 LrpprcQ6PB66 1392 aaKnown RBP27.8■■■□□ 2.04
Tpm1-215ENSMUST00000113705 Eif4g3Q80XI3 1579 aaKnown RBP27.78■■■□□ 2.04
Tpm1-215ENSMUST00000113705 Urb2E9Q7L1 1524 aaKnown RBP27.78■■■□□ 2.04
Tpm1-215ENSMUST00000113705 Plb1Q3TTY0 1478 aa27.75■■■□□ 2.03
Tpm1-215ENSMUST00000113705 Crocc2F6XLV1 1638 aa27.74■■■□□ 2.03
Tpm1-215ENSMUST00000113705 PogzQ8BZH4 1409 aaKnown RBP27.66■■■□□ 2.02
Tpm1-215ENSMUST00000113705 Ccdc88bQ4QRL3 1481 aa27.59■■■□□ 2.01
Tpm1-215ENSMUST00000113705 Duox2A2AQ99 1517 aa27.55■■■□□ 2
Tpm1-215ENSMUST00000113705 Grin2bQ01097 1482 aa27.54■■■□□ 2
Tpm1-215ENSMUST00000113705 Ift140E9PY46 1464 aa27.46■■□□□ 1.99
Tpm1-215ENSMUST00000113705 Top2aQ01320 1528 aaKnown RBP27.4■■□□□ 1.98
Tpm1-215ENSMUST00000113705 Chic1Q8CBW7 227 aa27.4■■□□□ 1.98
Tpm1-215ENSMUST00000113705 Rusc2Q80U22 1514 aa27.39■■□□□ 1.98
Tpm1-215ENSMUST00000113705 Samd9lQ69Z37 1561 aa27.39■■□□□ 1.97
Tpm1-215ENSMUST00000113705 Shroom2A2ALU4 1481 aa27.31■■□□□ 1.96
Tpm1-215ENSMUST00000113705 Disp1Q3TDN0 1521 aa27.31■■□□□ 1.96
Tpm1-215ENSMUST00000113705 Efcab5A0JP43 1406 aa27.28■■□□□ 1.96
Tpm1-215ENSMUST00000113705 Dnajc5P60904 198 aa27.28■■□□□ 1.96
Tpm1-215ENSMUST00000113705 NrkQ9R0G8 1455 aa27.21■■□□□ 1.95
Tpm1-215ENSMUST00000113705 Rad54l2Q99NG0 1466 aa27.2■■□□□ 1.95
Tpm1-215ENSMUST00000113705 Setd1bQ8CFT2 1985 aa27.2■■□□□ 1.94
Tpm1-215ENSMUST00000113705 Pbrm1Q8BSQ9 1634 aaKnown RBP27.17■■□□□ 1.94
Tpm1-215ENSMUST00000113705 Nup160Q9Z0W3 1402 aaKnown RBP27.17■■□□□ 1.94
Tpm1-215ENSMUST00000113705 PtprkP35822 1457 aa27.16■■□□□ 1.94
Tpm1-215ENSMUST00000113705 Shroom4Q1W617 1475 aa27.14■■□□□ 1.94
Tpm1-215ENSMUST00000113705 Cc2d2bA0A286YDU8 1405 aa27.1■■□□□ 1.93
Tpm1-215ENSMUST00000113705 Grin2aP35436 1464 aa27.09■■□□□ 1.93
Tpm1-215ENSMUST00000113705 Magi3Q9EQJ9 1476 aa27.09■■□□□ 1.93
Tpm1-215ENSMUST00000113705 Pabpn1Q8CCS6 302 aaKnown RBP27.09■■□□□ 1.93
Tpm1-215ENSMUST00000113705 Pelp1Q9DBD5 1123 aaKnown RBP27.08■■□□□ 1.93
Tpm1-215ENSMUST00000113705 Zeb1Q64318 1117 aa26.98■■□□□ 1.91
Tpm1-215ENSMUST00000113705 SynmQ70IV5 1561 aa26.98■■□□□ 1.91
Tpm1-215ENSMUST00000113705 AqrQ8CFQ3 1481 aaKnown RBP26.97■■□□□ 1.91
Tpm1-215ENSMUST00000113705 Pla2r1Q62028 1487 aa26.95■■□□□ 1.9
Tpm1-215ENSMUST00000113705 Col17a1Q07563 1470 aa26.94■■□□□ 1.9
Tpm1-215ENSMUST00000113705 Npm2Q80W85 207 aa26.89■■□□□ 1.9
Tpm1-215ENSMUST00000113705 Fgd6Q69ZL1 1399 aa26.82■■□□□ 1.88
Tpm1-215ENSMUST00000113705 Gpatch8A2A6A1 1505 aa26.81■■□□□ 1.88
Tpm1-215ENSMUST00000113705 Gab3Q8BSM5 595 aa26.81■■□□□ 1.88
Tpm1-215ENSMUST00000113705 Mroh2bQ7M6Y6 1581 aa26.77■■□□□ 1.88
Tpm1-215ENSMUST00000113705 HrcG5E8J6 738 aa26.76■■□□□ 1.88
Retrieved 100 of 22,080 RNA–protein pairs in 59.9 ms