RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Smrp1Q2MH31 260 aa11.24□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 P06329 120 aa11.24□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 SycnQ8VCK7 134 aa11.23□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Gm12057A0A087WR21 115 aa11.23□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Znf706Q9D115 76 aaKnown RBP11.23□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Pla2g1bQ9Z0Y2 146 aa11.22□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Trbv13-2A0A140T8N6 113 aa11.22□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Cyyr1Q8VIH7 165 aa11.22□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 A0A286YCN5 57 aa11.22□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Sprr2jO70561 109 aa11.22□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 PscaP57096 123 aa11.22□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Gm9573F7C950 1606 aa11.22□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Trav14-1A0A0G2JF94 121 aa11.22□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 A0A286YE49 62 aa11.22□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Gm3443F7CCV5 94 aa11.21□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Ndufs5Q99LY9 106 aa11.21□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 Gm10549Q3URY4 149 aa11.21□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 TroQ6DIC6 2087 aa11.2□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 Gm5142Q8C5X9 133 aa11.2□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 Gm9767G3X930 207 aa11.19□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 H2al1aQ5M8Q2 105 aa11.19□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 ScxQ64124 207 aa11.19□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 H2al1eQ810S6 105 aa11.19□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 Prr9Q8BV84 116 aa11.19□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 Gm10845Q3UNY9 185 aa11.19□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 Gpha2Q925Q5 128 aa11.19□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 Gm10337F7DEP7 55 aa11.18□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 Defb40Q70KL2 73 aa11.18□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 BC067074F6RXI4 2391 aa11.18□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 BC025920Q3US60 128 aa11.18□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 Col4a4Q9QZR9 1682 aa11.17□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 Flg2Q2VIS4 2362 aa11.17□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 4930432M17RikQ3V0W9 174 aa11.17□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 Nupr2Q497P3 102 aa11.16□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 Rtl10D3YWW5 146 aa11.16□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 Psmb11Q8BG41 302 aa11.16□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 Gm5464Q3UY29 175 aa11.16□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 NpwA0A1L1STR8 176 aa11.15□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 Ifitm6A0A1B0GS75 124 aa11.15□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 PtprbB2RU80 1998 aa11.15□□□□□ -0.62
Pcdha9-201ENSMUST00000115659 CrygeQ03740 174 aa11.14□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Piezo1E2JF22 2547 aa11.14□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Alms1Q8K4E0 3251 aa11.14□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Tln1P26039 2541 aaKnown RBP11.14□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Znf580Q9DB38 172 aa11.14□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Arhgap32Q811P8 2089 aa11.14□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Serp1Q9Z1W5 66 aa11.14□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Cd164l2Q9D6W7 172 aa11.13□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 CdsnQ7TPC1 561 aa11.12□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Myo9aQ8C170 2542 aa11.11□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 TeppQ6IMH0 216 aa11.11□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Gm10135F6TEE5 83 aa11.11□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 P84750 121 aa11.11□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Lrp4Q8VI56 1905 aa11.1□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Gm5153P01627 120 aa11.1□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Spink13Q3UTS8 97 aa11.1□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Gm17509Q9CZ61 145 aa11.1□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 D730001G18RikA0A087WQU7 115 aa11.1□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Igkv8-30A0A140T8M3 121 aa11.1□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Ankhd1E9PUR0 2548 aaKnown RBP11.1□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Ighv8-13A0A075B5Y0 101 aa11.1□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Ighv2-9A0A075B5Q5 116 aa11.09□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 UqcrqQ9CQ69 82 aa11.09□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Zfand2aQ9JII7 171 aa11.09□□□□□ -0.63
Pcdha9-201ENSMUST00000115659 Defb2P82020 71 aa11.08□□□□□ -0.64
Pcdha9-201ENSMUST00000115659 2310009B15RikA0A0A6YWI4 143 aa11.08□□□□□ -0.64
Pcdha9-201ENSMUST00000115659 C2cd3Q52KB6 2323 aa11.07□□□□□ -0.64
Pcdha9-201ENSMUST00000115659 Odf3l2Q3TZ65 277 aa11.07□□□□□ -0.64
Pcdha9-201ENSMUST00000115659 3110070M22RikQ9DAQ7 118 aa11.06□□□□□ -0.64
Pcdha9-201ENSMUST00000115659 Wfdc13Q5DQQ6 81 aa11.06□□□□□ -0.64
Pcdha9-201ENSMUST00000115659 Igkv3-12A0A140T8P0 119 aa11.05□□□□□ -0.64
Pcdha9-201ENSMUST00000115659 Abca2P41234 2434 aa11.05□□□□□ -0.64
Pcdha9-201ENSMUST00000115659 Lrrk2Q5S006 2527 aa11.03□□□□□ -0.64
Pcdha9-201ENSMUST00000115659 Ighv1-56A0A0A6YXG2 117 aa11.03□□□□□ -0.64
Pcdha9-201ENSMUST00000115659 Crip2Q9DCT8 208 aaKnown RBP11.02□□□□□ -0.64
Pcdha9-201ENSMUST00000115659 Kiaa1549Q68FD9 1940 aa11.02□□□□□ -0.64
Pcdha9-201ENSMUST00000115659 Ntn5Q3UQ22 452 aa11.02□□□□□ -0.65
Pcdha9-201ENSMUST00000115659 Cdip1Q9DB75 208 aa11.02□□□□□ -0.65
Pcdha9-201ENSMUST00000115659 Gm43218A0A0G2JGT0 114 aa11.01□□□□□ -0.65
Pcdha9-201ENSMUST00000115659 Col27a1Q5QNQ9 1845 aa11.01□□□□□ -0.65
Pcdha9-201ENSMUST00000115659 9230102O04RikA2ASX7 82 aa11□□□□□ -0.65
Pcdha9-201ENSMUST00000115659 Ttc28Q80XJ3 2450 aa11□□□□□ -0.65
Pcdha9-201ENSMUST00000115659 C130032M10RikQ8C888 123 aa11□□□□□ -0.65
Pcdha9-201ENSMUST00000115659 1700074P13RikQ9D9G7 251 aa10.99□□□□□ -0.65
Pcdha9-201ENSMUST00000115659 Bri3P28662 125 aa10.98□□□□□ -0.65
Pcdha9-201ENSMUST00000115659 Defb45Q3V490 66 aa10.97□□□□□ -0.65
Pcdha9-201ENSMUST00000115659 Piezo2Q8CD54 2822 aa10.96□□□□□ -0.65
Pcdha9-201ENSMUST00000115659 Gm10267M0QWD8 85 aa10.95□□□□□ -0.66
Pcdha9-201ENSMUST00000115659 Hivep2Q3UHF7 2430 aa10.95□□□□□ -0.66
Pcdha9-201ENSMUST00000115659 Apoc4Q61268 124 aa10.94□□□□□ -0.66
Pcdha9-201ENSMUST00000115659 Gm16485Q8C4B7 115 aa10.94□□□□□ -0.66
Pcdha9-201ENSMUST00000115659 Pkd1l2Q7TN88 2461 aa10.94□□□□□ -0.66
Pcdha9-201ENSMUST00000115659 Ighv2-5A0A0A6YY69 116 aa10.94□□□□□ -0.66
Pcdha9-201ENSMUST00000115659 H2al1mQ9DAD9 105 aa10.93□□□□□ -0.66
Pcdha9-201ENSMUST00000115659 Srsf12Q8C8K3 266 aa10.92□□□□□ -0.66
Pcdha9-201ENSMUST00000115659 H2al1kJ3QP08 105 aa10.91□□□□□ -0.66
Pcdha9-201ENSMUST00000115659 Igkv8-28A0A0G2JE47 121 aa10.91□□□□□ -0.66
Pcdha9-201ENSMUST00000115659 Q9DAA7 145 aa10.91□□□□□ -0.66
Pcdha9-201ENSMUST00000115659 Notch2O35516 2470 aa10.9□□□□□ -0.66
Pcdha9-201ENSMUST00000115659 P01819 144 aa10.9□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 55.3 ms