Protein–RNA interactions for Protein: O35516

Notch2, Neurogenic locus notch homolog protein 2, mousemouse

Predictions only

Length 2,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch2O35516 Gm25239-201ENSMUST00000174915 86 ntBASIC32.63■■■□□ 2.81
Notch2O35516 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Notch2O35516 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Notch2O35516 Gm24109-201ENSMUST00000175489 103 ntBASIC28.86■■■□□ 2.21
Notch2O35516 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Notch2O35516 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Notch2O35516 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Notch2O35516 Gm15042-201ENSMUST00000120212 883 ntBASIC27.36■■□□□ 1.97
Notch2O35516 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Notch2O35516 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Notch2O35516 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.06■■□□□ 1.92
Notch2O35516 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.96■■□□□ 1.91
Notch2O35516 Gm23366-201ENSMUST00000175022 89 ntBASIC26.91■■□□□ 1.9
Notch2O35516 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Notch2O35516 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.84■■□□□ 1.89
Notch2O35516 Gm15045-201ENSMUST00000117359 883 ntBASIC26.59■■□□□ 1.85
Notch2O35516 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.22■■□□□ 1.79
Notch2O35516 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Notch2O35516 Gm25238-201ENSMUST00000174914 89 ntBASIC26.02■■□□□ 1.76
Notch2O35516 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Notch2O35516 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Notch2O35516 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.69■■□□□ 1.7
Notch2O35516 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Notch2O35516 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Notch2O35516 Gm25262-201ENSMUST00000174934 133 ntBASIC25.43■■□□□ 1.66
Notch2O35516 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
Notch2O35516 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
Notch2O35516 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Notch2O35516 Gm26115-201ENSMUST00000175605 87 ntBASIC25.15■■□□□ 1.62
Notch2O35516 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.12■■□□□ 1.61
Notch2O35516 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.1■■□□□ 1.61
Notch2O35516 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.94■■□□□ 1.58
Notch2O35516 Gm8109-201ENSMUST00000194076 746 ntBASIC24.93■■□□□ 1.58
Notch2O35516 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Notch2O35516 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Notch2O35516 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Notch2O35516 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.61■■□□□ 1.53
Notch2O35516 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.52■■□□□ 1.52
Notch2O35516 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.52■■□□□ 1.52
Notch2O35516 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.45■■□□□ 1.5
Notch2O35516 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Notch2O35516 Rab21-202ENSMUST00000218831 843 ntBASIC24.15■■□□□ 1.46
Notch2O35516 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Notch2O35516 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.06■■□□□ 1.44
Notch2O35516 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Notch2O35516 Gm27325-201ENSMUST00000175467 74 ntBASIC24.02■■□□□ 1.44
Notch2O35516 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Notch2O35516 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Notch2O35516 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.96■■□□□ 1.43
Notch2O35516 Gm24804-201ENSMUST00000174982 85 ntBASIC23.96■■□□□ 1.43
Notch2O35516 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Notch2O35516 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Notch2O35516 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Notch2O35516 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Notch2O35516 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Notch2O35516 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Notch2O35516 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.81■■□□□ 1.4
Notch2O35516 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Notch2O35516 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Notch2O35516 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Notch2O35516 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.77■■□□□ 1.4
Notch2O35516 Zfp131-205ENSMUST00000223812 663 ntBASIC23.75■■□□□ 1.39
Notch2O35516 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Notch2O35516 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Notch2O35516 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Notch2O35516 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.53■■□□□ 1.36
Notch2O35516 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.53■■□□□ 1.36
Notch2O35516 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Notch2O35516 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Notch2O35516 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Notch2O35516 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.46■■□□□ 1.35
Notch2O35516 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.45■■□□□ 1.34
Notch2O35516 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.39■■□□□ 1.33
Notch2O35516 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Notch2O35516 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.33■■□□□ 1.32
Notch2O35516 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Notch2O35516 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Notch2O35516 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Notch2O35516 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.28■■□□□ 1.32
Notch2O35516 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Notch2O35516 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.25■■□□□ 1.31
Notch2O35516 Gm27322-201ENSMUST00000184007 104 ntBASIC23.23■■□□□ 1.31
Notch2O35516 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Notch2O35516 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Notch2O35516 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Notch2O35516 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.2■■□□□ 1.3
Notch2O35516 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Notch2O35516 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Notch2O35516 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Notch2O35516 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Notch2O35516 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Notch2O35516 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Notch2O35516 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Notch2O35516 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Notch2O35516 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Notch2O35516 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.05■■□□□ 1.28
Notch2O35516 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Notch2O35516 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.03■■□□□ 1.28
Notch2O35516 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.99■■□□□ 1.27
Notch2O35516 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms