Protein–RNA interactions for Protein: Q3V0W9

4930432M17Rik, RIKEN cDNA 4930432M17 gene, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930432M17RikQ3V0W9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
4930432M17RikQ3V0W9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
4930432M17RikQ3V0W9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
4930432M17RikQ3V0W9 Gm25239-201ENSMUST00000174915 86 ntBASIC22.24■■□□□ 1.15
4930432M17RikQ3V0W9 Psd-208ENSMUST00000224556 2034 ntBASIC22.14■■□□□ 1.14
4930432M17RikQ3V0W9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
4930432M17RikQ3V0W9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
4930432M17RikQ3V0W9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
4930432M17RikQ3V0W9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
4930432M17RikQ3V0W9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
4930432M17RikQ3V0W9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
4930432M17RikQ3V0W9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
4930432M17RikQ3V0W9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
4930432M17RikQ3V0W9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
4930432M17RikQ3V0W9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
4930432M17RikQ3V0W9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
4930432M17RikQ3V0W9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
4930432M17RikQ3V0W9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.58■□□□□ 0.89
4930432M17RikQ3V0W9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
4930432M17RikQ3V0W9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
4930432M17RikQ3V0W9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
4930432M17RikQ3V0W9 Gm15042-201ENSMUST00000120212 883 ntBASIC20.24■□□□□ 0.83
4930432M17RikQ3V0W9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
4930432M17RikQ3V0W9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4930432M17RikQ3V0W9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
4930432M17RikQ3V0W9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.11■□□□□ 0.81
4930432M17RikQ3V0W9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
4930432M17RikQ3V0W9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
4930432M17RikQ3V0W9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
4930432M17RikQ3V0W9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
4930432M17RikQ3V0W9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.96■□□□□ 0.79
4930432M17RikQ3V0W9 Gm15045-201ENSMUST00000117359 883 ntBASIC19.94■□□□□ 0.78
4930432M17RikQ3V0W9 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.93■□□□□ 0.78
4930432M17RikQ3V0W9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
4930432M17RikQ3V0W9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
4930432M17RikQ3V0W9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.88■□□□□ 0.77
4930432M17RikQ3V0W9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.88■□□□□ 0.77
4930432M17RikQ3V0W9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
4930432M17RikQ3V0W9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
4930432M17RikQ3V0W9 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.83■□□□□ 0.76
4930432M17RikQ3V0W9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
4930432M17RikQ3V0W9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
4930432M17RikQ3V0W9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
4930432M17RikQ3V0W9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
4930432M17RikQ3V0W9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
4930432M17RikQ3V0W9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
4930432M17RikQ3V0W9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
4930432M17RikQ3V0W9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
4930432M17RikQ3V0W9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
4930432M17RikQ3V0W9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
4930432M17RikQ3V0W9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.53■□□□□ 0.72
4930432M17RikQ3V0W9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
4930432M17RikQ3V0W9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
4930432M17RikQ3V0W9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
4930432M17RikQ3V0W9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
4930432M17RikQ3V0W9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
4930432M17RikQ3V0W9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
4930432M17RikQ3V0W9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
4930432M17RikQ3V0W9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
4930432M17RikQ3V0W9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
4930432M17RikQ3V0W9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
4930432M17RikQ3V0W9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
4930432M17RikQ3V0W9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
4930432M17RikQ3V0W9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.13■□□□□ 0.65
4930432M17RikQ3V0W9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
4930432M17RikQ3V0W9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
4930432M17RikQ3V0W9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
4930432M17RikQ3V0W9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
4930432M17RikQ3V0W9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
4930432M17RikQ3V0W9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
4930432M17RikQ3V0W9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19■□□□□ 0.63
4930432M17RikQ3V0W9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
4930432M17RikQ3V0W9 Gm24109-201ENSMUST00000175489 103 ntBASIC18.92■□□□□ 0.62
4930432M17RikQ3V0W9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
4930432M17RikQ3V0W9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.88■□□□□ 0.61
4930432M17RikQ3V0W9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
4930432M17RikQ3V0W9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
4930432M17RikQ3V0W9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
4930432M17RikQ3V0W9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4930432M17RikQ3V0W9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
4930432M17RikQ3V0W9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
4930432M17RikQ3V0W9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
4930432M17RikQ3V0W9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
4930432M17RikQ3V0W9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
4930432M17RikQ3V0W9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
4930432M17RikQ3V0W9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
4930432M17RikQ3V0W9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
4930432M17RikQ3V0W9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
4930432M17RikQ3V0W9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
4930432M17RikQ3V0W9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
4930432M17RikQ3V0W9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
4930432M17RikQ3V0W9 Gm23366-201ENSMUST00000175022 89 ntBASIC18.68■□□□□ 0.58
4930432M17RikQ3V0W9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.68■□□□□ 0.58
4930432M17RikQ3V0W9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
4930432M17RikQ3V0W9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
4930432M17RikQ3V0W9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
4930432M17RikQ3V0W9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
4930432M17RikQ3V0W9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.61■□□□□ 0.57
4930432M17RikQ3V0W9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
4930432M17RikQ3V0W9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms