Protein–RNA interactions for Protein: Q5S006

Lrrk2, Leucine-rich repeat serine/threonine-protein kinase 2, mousemouse

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk2Q5S006 Gm25239-201ENSMUST00000174915 86 ntBASIC36.36■■■■□ 3.41
Lrrk2Q5S006 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
Lrrk2Q5S006 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Lrrk2Q5S006 Gm24109-201ENSMUST00000175489 103 ntBASIC31.92■■■□□ 2.7
Lrrk2Q5S006 Gm15042-201ENSMUST00000120212 883 ntBASIC30.97■■■□□ 2.55
Lrrk2Q5S006 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Lrrk2Q5S006 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Lrrk2Q5S006 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Lrrk2Q5S006 Gm15045-201ENSMUST00000117359 883 ntBASIC30.26■■■□□ 2.43
Lrrk2Q5S006 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Lrrk2Q5S006 Gm23366-201ENSMUST00000175022 89 ntBASIC30.04■■■□□ 2.4
Lrrk2Q5S006 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.8■■■□□ 2.36
Lrrk2Q5S006 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Lrrk2Q5S006 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.67■■■□□ 2.34
Lrrk2Q5S006 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.6■■■□□ 2.33
Lrrk2Q5S006 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Lrrk2Q5S006 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Lrrk2Q5S006 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.04■■■□□ 2.24
Lrrk2Q5S006 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Lrrk2Q5S006 Gm25238-201ENSMUST00000174914 89 ntBASIC28.89■■■□□ 2.22
Lrrk2Q5S006 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Lrrk2Q5S006 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Lrrk2Q5S006 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
Lrrk2Q5S006 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Lrrk2Q5S006 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
Lrrk2Q5S006 Gm25262-201ENSMUST00000174934 133 ntBASIC27.99■■■□□ 2.07
Lrrk2Q5S006 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.95■■■□□ 2.06
Lrrk2Q5S006 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.77■■■□□ 2.04
Lrrk2Q5S006 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
Lrrk2Q5S006 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Lrrk2Q5S006 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Lrrk2Q5S006 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.66■■■□□ 2.02
Lrrk2Q5S006 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Lrrk2Q5S006 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Lrrk2Q5S006 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.53■■■□□ 2
Lrrk2Q5S006 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Lrrk2Q5S006 Gm26115-201ENSMUST00000175605 87 ntBASIC27.47■■□□□ 1.99
Lrrk2Q5S006 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Lrrk2Q5S006 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.43■■□□□ 1.98
Lrrk2Q5S006 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.4■■□□□ 1.98
Lrrk2Q5S006 Gm8109-201ENSMUST00000194076 746 ntBASIC27.3■■□□□ 1.96
Lrrk2Q5S006 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.29■■□□□ 1.96
Lrrk2Q5S006 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Lrrk2Q5S006 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.29■■□□□ 1.96
Lrrk2Q5S006 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Lrrk2Q5S006 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
Lrrk2Q5S006 Gm27325-201ENSMUST00000175467 74 ntBASIC27.21■■□□□ 1.95
Lrrk2Q5S006 Rab21-202ENSMUST00000218831 843 ntBASIC27.1■■□□□ 1.93
Lrrk2Q5S006 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Lrrk2Q5S006 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.02■■□□□ 1.92
Lrrk2Q5S006 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.92
Lrrk2Q5S006 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Lrrk2Q5S006 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.9■■□□□ 1.9
Lrrk2Q5S006 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Lrrk2Q5S006 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Lrrk2Q5S006 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Lrrk2Q5S006 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.78■■□□□ 1.88
Lrrk2Q5S006 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.71■■□□□ 1.87
Lrrk2Q5S006 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Lrrk2Q5S006 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Lrrk2Q5S006 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Lrrk2Q5S006 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Lrrk2Q5S006 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Lrrk2Q5S006 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Lrrk2Q5S006 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lrrk2Q5S006 Gm24804-201ENSMUST00000174982 85 ntBASIC26.39■■□□□ 1.81
Lrrk2Q5S006 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Lrrk2Q5S006 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.31■■□□□ 1.8
Lrrk2Q5S006 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Lrrk2Q5S006 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Lrrk2Q5S006 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.17■■□□□ 1.78
Lrrk2Q5S006 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Lrrk2Q5S006 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.15■■□□□ 1.78
Lrrk2Q5S006 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Lrrk2Q5S006 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.12■■□□□ 1.77
Lrrk2Q5S006 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Lrrk2Q5S006 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.09■■□□□ 1.77
Lrrk2Q5S006 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.08■■□□□ 1.77
Lrrk2Q5S006 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Lrrk2Q5S006 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Lrrk2Q5S006 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Lrrk2Q5S006 Zfp131-205ENSMUST00000223812 663 ntBASIC26.02■■□□□ 1.76
Lrrk2Q5S006 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
Lrrk2Q5S006 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Lrrk2Q5S006 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Lrrk2Q5S006 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.92■■□□□ 1.74
Lrrk2Q5S006 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Lrrk2Q5S006 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Lrrk2Q5S006 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Lrrk2Q5S006 Gm27322-201ENSMUST00000184007 104 ntBASIC25.87■■□□□ 1.73
Lrrk2Q5S006 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.87■■□□□ 1.73
Lrrk2Q5S006 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Lrrk2Q5S006 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Lrrk2Q5S006 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Lrrk2Q5S006 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Lrrk2Q5S006 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Lrrk2Q5S006 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
Lrrk2Q5S006 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.66■■□□□ 1.7
Lrrk2Q5S006 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.65■■□□□ 1.7
Lrrk2Q5S006 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.64■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms