Protein–RNA interactions for Protein: Q3US60

BC025920, MCG148085, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC025920Q3US60 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
BC025920Q3US60 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
BC025920Q3US60 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
BC025920Q3US60 Gm25239-201ENSMUST00000174915 86 ntBASIC23.46■■□□□ 1.35
BC025920Q3US60 Psd-208ENSMUST00000224556 2034 ntBASIC23.16■■□□□ 1.3
BC025920Q3US60 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
BC025920Q3US60 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
BC025920Q3US60 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
BC025920Q3US60 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
BC025920Q3US60 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BC025920Q3US60 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
BC025920Q3US60 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
BC025920Q3US60 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
BC025920Q3US60 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
BC025920Q3US60 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BC025920Q3US60 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BC025920Q3US60 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.63■■□□□ 1.05
BC025920Q3US60 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BC025920Q3US60 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
BC025920Q3US60 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
BC025920Q3US60 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
BC025920Q3US60 Gm15042-201ENSMUST00000120212 883 ntBASIC21.34■■□□□ 1.01
BC025920Q3US60 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.27■■□□□ 1
BC025920Q3US60 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BC025920Q3US60 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BC025920Q3US60 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
BC025920Q3US60 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.07■□□□□ 0.96
BC025920Q3US60 Gm15045-201ENSMUST00000117359 883 ntBASIC21.03■□□□□ 0.96
BC025920Q3US60 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BC025920Q3US60 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.94■□□□□ 0.94
BC025920Q3US60 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.9■□□□□ 0.94
BC025920Q3US60 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BC025920Q3US60 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BC025920Q3US60 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
BC025920Q3US60 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BC025920Q3US60 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.81■□□□□ 0.92
BC025920Q3US60 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.8■□□□□ 0.92
BC025920Q3US60 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.75■□□□□ 0.91
BC025920Q3US60 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BC025920Q3US60 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BC025920Q3US60 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BC025920Q3US60 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BC025920Q3US60 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BC025920Q3US60 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BC025920Q3US60 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BC025920Q3US60 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.55■□□□□ 0.88
BC025920Q3US60 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
BC025920Q3US60 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BC025920Q3US60 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BC025920Q3US60 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BC025920Q3US60 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
BC025920Q3US60 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BC025920Q3US60 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BC025920Q3US60 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BC025920Q3US60 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BC025920Q3US60 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BC025920Q3US60 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BC025920Q3US60 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
BC025920Q3US60 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
BC025920Q3US60 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BC025920Q3US60 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BC025920Q3US60 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.08■□□□□ 0.8
BC025920Q3US60 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BC025920Q3US60 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
BC025920Q3US60 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BC025920Q3US60 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BC025920Q3US60 Gm24109-201ENSMUST00000175489 103 ntBASIC19.98■□□□□ 0.79
BC025920Q3US60 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BC025920Q3US60 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BC025920Q3US60 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
BC025920Q3US60 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BC025920Q3US60 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
BC025920Q3US60 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
BC025920Q3US60 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
BC025920Q3US60 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
BC025920Q3US60 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BC025920Q3US60 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BC025920Q3US60 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BC025920Q3US60 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.75■□□□□ 0.75
BC025920Q3US60 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BC025920Q3US60 Gm23366-201ENSMUST00000175022 89 ntBASIC19.71■□□□□ 0.75
BC025920Q3US60 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
BC025920Q3US60 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BC025920Q3US60 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BC025920Q3US60 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BC025920Q3US60 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BC025920Q3US60 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BC025920Q3US60 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BC025920Q3US60 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.56■□□□□ 0.72
BC025920Q3US60 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BC025920Q3US60 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BC025920Q3US60 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
BC025920Q3US60 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BC025920Q3US60 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BC025920Q3US60 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
BC025920Q3US60 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BC025920Q3US60 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BC025920Q3US60 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BC025920Q3US60 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
BC025920Q3US60 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms