Protein–RNA interactions for Protein: P41234

Abca2, ATP-binding cassette sub-family A member 2, mousemouse

Predictions only

Length 2,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca2P41234 Gm25239-201ENSMUST00000174915 86 ntBASIC32.91■■■□□ 2.86
Abca2P41234 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Abca2P41234 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Abca2P41234 Gm24109-201ENSMUST00000175489 103 ntBASIC29.02■■■□□ 2.24
Abca2P41234 Gm15042-201ENSMUST00000120212 883 ntBASIC28.18■■■□□ 2.1
Abca2P41234 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Abca2P41234 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Abca2P41234 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Abca2P41234 Gm15045-201ENSMUST00000117359 883 ntBASIC27.65■■■□□ 2.02
Abca2P41234 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Abca2P41234 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.25■■□□□ 1.95
Abca2P41234 Gm23366-201ENSMUST00000175022 89 ntBASIC27.21■■□□□ 1.95
Abca2P41234 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Abca2P41234 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Abca2P41234 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.06■■□□□ 1.92
Abca2P41234 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.95■■□□□ 1.9
Abca2P41234 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Abca2P41234 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Abca2P41234 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.39■■□□□ 1.81
Abca2P41234 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Abca2P41234 Gm25238-201ENSMUST00000174914 89 ntBASIC26.22■■□□□ 1.79
Abca2P41234 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Abca2P41234 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Abca2P41234 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Abca2P41234 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Abca2P41234 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.65■■□□□ 1.7
Abca2P41234 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
Abca2P41234 Gm25262-201ENSMUST00000174934 133 ntBASIC25.52■■□□□ 1.68
Abca2P41234 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.68
Abca2P41234 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
Abca2P41234 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Abca2P41234 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.44■■□□□ 1.66
Abca2P41234 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Abca2P41234 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Abca2P41234 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.3■■□□□ 1.64
Abca2P41234 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Abca2P41234 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Abca2P41234 Gm26115-201ENSMUST00000175605 87 ntBASIC25.24■■□□□ 1.63
Abca2P41234 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.21■■□□□ 1.63
Abca2P41234 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Abca2P41234 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Abca2P41234 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.08■■□□□ 1.61
Abca2P41234 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.08■■□□□ 1.61
Abca2P41234 Gm8109-201ENSMUST00000194076 746 ntBASIC25.04■■□□□ 1.6
Abca2P41234 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Abca2P41234 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.95■■□□□ 1.59
Abca2P41234 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Abca2P41234 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Abca2P41234 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.82■■□□□ 1.56
Abca2P41234 Gm27325-201ENSMUST00000175467 74 ntBASIC24.76■■□□□ 1.55
Abca2P41234 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Abca2P41234 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.63■■□□□ 1.53
Abca2P41234 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Abca2P41234 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Abca2P41234 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.61■■□□□ 1.53
Abca2P41234 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Abca2P41234 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Abca2P41234 Rab21-202ENSMUST00000218831 843 ntBASIC24.45■■□□□ 1.51
Abca2P41234 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Abca2P41234 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.38■■□□□ 1.49
Abca2P41234 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.28■■□□□ 1.48
Abca2P41234 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.24■■□□□ 1.47
Abca2P41234 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Abca2P41234 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Abca2P41234 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Abca2P41234 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Abca2P41234 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.09■■□□□ 1.45
Abca2P41234 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Abca2P41234 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Abca2P41234 Psd-208ENSMUST00000224556 2034 ntBASIC24.06■■□□□ 1.44
Abca2P41234 Gm24804-201ENSMUST00000174982 85 ntBASIC24.03■■□□□ 1.44
Abca2P41234 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Abca2P41234 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Abca2P41234 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.98■■□□□ 1.43
Abca2P41234 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Abca2P41234 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Abca2P41234 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.9■■□□□ 1.42
Abca2P41234 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.86■■□□□ 1.41
Abca2P41234 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.86■■□□□ 1.41
Abca2P41234 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Abca2P41234 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Abca2P41234 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Abca2P41234 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Abca2P41234 Zfp131-205ENSMUST00000223812 663 ntBASIC23.78■■□□□ 1.4
Abca2P41234 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Abca2P41234 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.74■■□□□ 1.39
Abca2P41234 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Abca2P41234 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.73■■□□□ 1.39
Abca2P41234 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Abca2P41234 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
Abca2P41234 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Abca2P41234 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.67■■□□□ 1.38
Abca2P41234 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Abca2P41234 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Abca2P41234 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Abca2P41234 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Abca2P41234 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.51■■□□□ 1.35
Abca2P41234 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.5■■□□□ 1.35
Abca2P41234 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Abca2P41234 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.48■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms