Protein–RNA interactions for Protein: A0A087WR21

Gm12057, Predicted gene 12057 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12057A0A087WR21 Gm25239-201ENSMUST00000174915 86 ntBASIC26.7■■□□□ 1.86
Gm12057A0A087WR21 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Gm12057A0A087WR21 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Gm12057A0A087WR21 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Gm12057A0A087WR21 Gm15042-201ENSMUST00000120212 883 ntBASIC23.29■■□□□ 1.32
Gm12057A0A087WR21 Gm24109-201ENSMUST00000175489 103 ntBASIC23.16■■□□□ 1.3
Gm12057A0A087WR21 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Gm12057A0A087WR21 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Gm12057A0A087WR21 Gm15045-201ENSMUST00000117359 883 ntBASIC22.72■■□□□ 1.23
Gm12057A0A087WR21 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Gm12057A0A087WR21 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm12057A0A087WR21 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Gm12057A0A087WR21 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm12057A0A087WR21 Gm23366-201ENSMUST00000175022 89 ntBASIC22.3■■□□□ 1.16
Gm12057A0A087WR21 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm12057A0A087WR21 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Gm12057A0A087WR21 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm12057A0A087WR21 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Gm12057A0A087WR21 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.64■■□□□ 1.05
Gm12057A0A087WR21 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm12057A0A087WR21 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm12057A0A087WR21 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gm12057A0A087WR21 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Gm12057A0A087WR21 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.47■■□□□ 1.03
Gm12057A0A087WR21 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.46■■□□□ 1.03
Gm12057A0A087WR21 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Gm12057A0A087WR21 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Gm12057A0A087WR21 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm12057A0A087WR21 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Gm12057A0A087WR21 Psd-208ENSMUST00000224556 2034 ntBASIC21.4■■□□□ 1.02
Gm12057A0A087WR21 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm12057A0A087WR21 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm12057A0A087WR21 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm12057A0A087WR21 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm12057A0A087WR21 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm12057A0A087WR21 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm12057A0A087WR21 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm12057A0A087WR21 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm12057A0A087WR21 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm12057A0A087WR21 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.09■□□□□ 0.97
Gm12057A0A087WR21 Gm25238-201ENSMUST00000174914 89 ntBASIC21.07■□□□□ 0.96
Gm12057A0A087WR21 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm12057A0A087WR21 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm12057A0A087WR21 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm12057A0A087WR21 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.96■□□□□ 0.95
Gm12057A0A087WR21 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm12057A0A087WR21 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm12057A0A087WR21 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm12057A0A087WR21 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm12057A0A087WR21 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm12057A0A087WR21 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Gm12057A0A087WR21 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Gm12057A0A087WR21 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Gm12057A0A087WR21 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm12057A0A087WR21 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.6■□□□□ 0.89
Gm12057A0A087WR21 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm12057A0A087WR21 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm12057A0A087WR21 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.54■□□□□ 0.88
Gm12057A0A087WR21 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm12057A0A087WR21 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm12057A0A087WR21 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.42■□□□□ 0.86
Gm12057A0A087WR21 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm12057A0A087WR21 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm12057A0A087WR21 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.37■□□□□ 0.85
Gm12057A0A087WR21 Gm27325-201ENSMUST00000175467 74 ntBASIC20.37■□□□□ 0.85
Gm12057A0A087WR21 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm12057A0A087WR21 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm12057A0A087WR21 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm12057A0A087WR21 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Gm12057A0A087WR21 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm12057A0A087WR21 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.32■□□□□ 0.84
Gm12057A0A087WR21 Zxda-201ENSMUST00000117281 2621 ntBASIC20.29■□□□□ 0.84
Gm12057A0A087WR21 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm12057A0A087WR21 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm12057A0A087WR21 Gm25262-201ENSMUST00000174934 133 ntBASIC20.24■□□□□ 0.83
Gm12057A0A087WR21 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm12057A0A087WR21 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm12057A0A087WR21 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.21■□□□□ 0.83
Gm12057A0A087WR21 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm12057A0A087WR21 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.12■□□□□ 0.81
Gm12057A0A087WR21 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm12057A0A087WR21 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.11■□□□□ 0.81
Gm12057A0A087WR21 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12057A0A087WR21 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12057A0A087WR21 Rab21-202ENSMUST00000218831 843 ntBASIC20.05■□□□□ 0.8
Gm12057A0A087WR21 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.03■□□□□ 0.8
Gm12057A0A087WR21 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm12057A0A087WR21 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.01■□□□□ 0.79
Gm12057A0A087WR21 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.97■□□□□ 0.79
Gm12057A0A087WR21 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Gm12057A0A087WR21 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm12057A0A087WR21 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm12057A0A087WR21 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.87■□□□□ 0.77
Gm12057A0A087WR21 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Gm12057A0A087WR21 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm12057A0A087WR21 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.84■□□□□ 0.77
Gm12057A0A087WR21 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm12057A0A087WR21 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Gm12057A0A087WR21 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm12057A0A087WR21 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms