Protein–RNA interactions for Protein: A0A087WR21

Gm12057, Predicted gene 12057 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12057A0A087WR21 Gm25239-201ENSMUST00000174915 86 ntBASIC26.7■■□□□ 1.86
Gm12057A0A087WR21 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Gm12057A0A087WR21 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Gm12057A0A087WR21 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Gm12057A0A087WR21 Gm15042-201ENSMUST00000120212 883 ntBASIC23.29■■□□□ 1.32
Gm12057A0A087WR21 Gm24109-201ENSMUST00000175489 103 ntBASIC23.16■■□□□ 1.3
Gm12057A0A087WR21 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Gm12057A0A087WR21 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Gm12057A0A087WR21 Gm15045-201ENSMUST00000117359 883 ntBASIC22.72■■□□□ 1.23
Gm12057A0A087WR21 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Gm12057A0A087WR21 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm12057A0A087WR21 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Gm12057A0A087WR21 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm12057A0A087WR21 Gm23366-201ENSMUST00000175022 89 ntBASIC22.3■■□□□ 1.16
Gm12057A0A087WR21 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm12057A0A087WR21 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Gm12057A0A087WR21 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm12057A0A087WR21 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Gm12057A0A087WR21 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.64■■□□□ 1.05
Gm12057A0A087WR21 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm12057A0A087WR21 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm12057A0A087WR21 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gm12057A0A087WR21 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Gm12057A0A087WR21 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.47■■□□□ 1.03
Gm12057A0A087WR21 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.46■■□□□ 1.03
Gm12057A0A087WR21 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Gm12057A0A087WR21 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Gm12057A0A087WR21 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm12057A0A087WR21 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Gm12057A0A087WR21 Psd-208ENSMUST00000224556 2034 ntBASIC21.4■■□□□ 1.02
Gm12057A0A087WR21 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm12057A0A087WR21 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm12057A0A087WR21 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm12057A0A087WR21 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm12057A0A087WR21 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm12057A0A087WR21 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm12057A0A087WR21 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm12057A0A087WR21 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm12057A0A087WR21 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm12057A0A087WR21 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.09■□□□□ 0.97
Gm12057A0A087WR21 Gm25238-201ENSMUST00000174914 89 ntBASIC21.07■□□□□ 0.96
Gm12057A0A087WR21 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm12057A0A087WR21 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm12057A0A087WR21 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm12057A0A087WR21 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.96■□□□□ 0.95
Gm12057A0A087WR21 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm12057A0A087WR21 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm12057A0A087WR21 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm12057A0A087WR21 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm12057A0A087WR21 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm12057A0A087WR21 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Gm12057A0A087WR21 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Gm12057A0A087WR21 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Gm12057A0A087WR21 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm12057A0A087WR21 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.6■□□□□ 0.89
Gm12057A0A087WR21 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm12057A0A087WR21 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm12057A0A087WR21 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.54■□□□□ 0.88
Gm12057A0A087WR21 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm12057A0A087WR21 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm12057A0A087WR21 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.42■□□□□ 0.86
Gm12057A0A087WR21 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm12057A0A087WR21 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm12057A0A087WR21 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.37■□□□□ 0.85
Gm12057A0A087WR21 Gm27325-201ENSMUST00000175467 74 ntBASIC20.37■□□□□ 0.85
Gm12057A0A087WR21 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm12057A0A087WR21 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm12057A0A087WR21 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm12057A0A087WR21 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Gm12057A0A087WR21 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm12057A0A087WR21 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.32■□□□□ 0.84
Gm12057A0A087WR21 Zxda-201ENSMUST00000117281 2621 ntBASIC20.29■□□□□ 0.84
Gm12057A0A087WR21 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm12057A0A087WR21 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm12057A0A087WR21 Gm25262-201ENSMUST00000174934 133 ntBASIC20.24■□□□□ 0.83
Gm12057A0A087WR21 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm12057A0A087WR21 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm12057A0A087WR21 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.21■□□□□ 0.83
Gm12057A0A087WR21 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm12057A0A087WR21 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.12■□□□□ 0.81
Gm12057A0A087WR21 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm12057A0A087WR21 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.11■□□□□ 0.81
Gm12057A0A087WR21 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12057A0A087WR21 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12057A0A087WR21 Rab21-202ENSMUST00000218831 843 ntBASIC20.05■□□□□ 0.8
Gm12057A0A087WR21 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.03■□□□□ 0.8
Gm12057A0A087WR21 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm12057A0A087WR21 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.01■□□□□ 0.79
Gm12057A0A087WR21 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.97■□□□□ 0.79
Gm12057A0A087WR21 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Gm12057A0A087WR21 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm12057A0A087WR21 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm12057A0A087WR21 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.87■□□□□ 0.77
Gm12057A0A087WR21 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Gm12057A0A087WR21 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm12057A0A087WR21 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.84■□□□□ 0.77
Gm12057A0A087WR21 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm12057A0A087WR21 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Gm12057A0A087WR21 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm12057A0A087WR21 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms