Protein–RNA interactions for Protein: Q8BG41

Psmb11, Proteasome subunit beta type-11, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmb11Q8BG41 Gm25239-201ENSMUST00000174915 86 ntBASIC25.83■■□□□ 1.73
Psmb11Q8BG41 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Psmb11Q8BG41 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Psmb11Q8BG41 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Psmb11Q8BG41 Psd-208ENSMUST00000224556 2034 ntBASIC24.11■■□□□ 1.45
Psmb11Q8BG41 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Psmb11Q8BG41 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Psmb11Q8BG41 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Psmb11Q8BG41 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Psmb11Q8BG41 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Psmb11Q8BG41 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Psmb11Q8BG41 Gm15042-201ENSMUST00000120212 883 ntBASIC23.26■■□□□ 1.31
Psmb11Q8BG41 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Psmb11Q8BG41 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Psmb11Q8BG41 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Psmb11Q8BG41 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.04■■□□□ 1.28
Psmb11Q8BG41 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Psmb11Q8BG41 Gm15045-201ENSMUST00000117359 883 ntBASIC22.9■■□□□ 1.26
Psmb11Q8BG41 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Psmb11Q8BG41 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Psmb11Q8BG41 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Psmb11Q8BG41 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Psmb11Q8BG41 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Psmb11Q8BG41 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.4■■□□□ 1.18
Psmb11Q8BG41 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Psmb11Q8BG41 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Psmb11Q8BG41 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Psmb11Q8BG41 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Psmb11Q8BG41 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Psmb11Q8BG41 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Psmb11Q8BG41 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.25■■□□□ 1.15
Psmb11Q8BG41 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Psmb11Q8BG41 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Psmb11Q8BG41 Gm24109-201ENSMUST00000175489 103 ntBASIC22.11■■□□□ 1.13
Psmb11Q8BG41 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Psmb11Q8BG41 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Psmb11Q8BG41 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Psmb11Q8BG41 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.06■■□□□ 1.12
Psmb11Q8BG41 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.91■■□□□ 1.1
Psmb11Q8BG41 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Psmb11Q8BG41 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.89■■□□□ 1.09
Psmb11Q8BG41 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Psmb11Q8BG41 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Psmb11Q8BG41 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Psmb11Q8BG41 Gm23366-201ENSMUST00000175022 89 ntBASIC21.68■■□□□ 1.06
Psmb11Q8BG41 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Psmb11Q8BG41 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Psmb11Q8BG41 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Psmb11Q8BG41 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.46■■□□□ 1.03
Psmb11Q8BG41 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Psmb11Q8BG41 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.43■■□□□ 1.02
Psmb11Q8BG41 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Psmb11Q8BG41 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Psmb11Q8BG41 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Psmb11Q8BG41 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.32■■□□□ 1
Psmb11Q8BG41 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Psmb11Q8BG41 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Psmb11Q8BG41 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Psmb11Q8BG41 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Psmb11Q8BG41 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Psmb11Q8BG41 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.26■□□□□ 0.99
Psmb11Q8BG41 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Psmb11Q8BG41 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Psmb11Q8BG41 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Psmb11Q8BG41 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Psmb11Q8BG41 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Psmb11Q8BG41 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Psmb11Q8BG41 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Psmb11Q8BG41 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Psmb11Q8BG41 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Psmb11Q8BG41 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Psmb11Q8BG41 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Psmb11Q8BG41 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21■□□□□ 0.95
Psmb11Q8BG41 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.95
Psmb11Q8BG41 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Psmb11Q8BG41 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Psmb11Q8BG41 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Psmb11Q8BG41 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Psmb11Q8BG41 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Psmb11Q8BG41 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Psmb11Q8BG41 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Psmb11Q8BG41 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Psmb11Q8BG41 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Psmb11Q8BG41 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.67■□□□□ 0.9
Psmb11Q8BG41 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Psmb11Q8BG41 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Psmb11Q8BG41 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Psmb11Q8BG41 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Psmb11Q8BG41 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Psmb11Q8BG41 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Psmb11Q8BG41 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Psmb11Q8BG41 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Psmb11Q8BG41 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmb11Q8BG41 Gm27325-201ENSMUST00000175467 74 ntBASIC20.54■□□□□ 0.88
Psmb11Q8BG41 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Psmb11Q8BG41 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Psmb11Q8BG41 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Psmb11Q8BG41 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Psmb11Q8BG41 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.39■□□□□ 0.86
Psmb11Q8BG41 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms