RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Rhox8Q6VSS7 320 aa27.31■■□□□ 1.96
Pcdha9-201ENSMUST00000115659 Rpgrip1Q9EPQ2 1331 aa25.56■■□□□ 1.68
Pcdha9-201ENSMUST00000115659 Ehmt2Q9Z148 1263 aaKnown RBP24.42■■□□□ 1.5
Pcdha9-201ENSMUST00000115659 Las1lA2BE28 776 aaKnown RBP24.38■■□□□ 1.49
Pcdha9-201ENSMUST00000115659 Cngb1E1AZ71 1325 aa24.38■■□□□ 1.49
Pcdha9-201ENSMUST00000115659 Ccdc136Q3TVA9 1136 aa24.18■■□□□ 1.46
Pcdha9-201ENSMUST00000115659 Esf1Q3V1V3 845 aaKnown RBP24.01■■□□□ 1.43
Pcdha9-201ENSMUST00000115659 Wdr66E9Q743 1299 aa23.96■■□□□ 1.43
Pcdha9-201ENSMUST00000115659 Trim41Q5NCC3 630 aa23.95■■□□□ 1.42
Pcdha9-201ENSMUST00000115659 NischQ80TM9 1593 aa23.91■■□□□ 1.42
Pcdha9-201ENSMUST00000115659 Pelp1Q9DBD5 1123 aaKnown RBP23.82■■□□□ 1.4
Pcdha9-201ENSMUST00000115659 Zeb1Q64318 1117 aa23.71■■□□□ 1.39
Pcdha9-201ENSMUST00000115659 Gab3Q8BSM5 595 aa23.69■■□□□ 1.38
Pcdha9-201ENSMUST00000115659 Ube2uB1AUC4 352 aa23.59■■□□□ 1.37
Pcdha9-201ENSMUST00000115659 Npm2Q80W85 207 aa23.55■■□□□ 1.36
Pcdha9-201ENSMUST00000115659 Acin1Q9JIX8 1338 aaKnown RBP23.49■■□□□ 1.35
Pcdha9-201ENSMUST00000115659 NefmP08553 848 aa23.37■■□□□ 1.33
Pcdha9-201ENSMUST00000115659 Myt1lP97500 1187 aa23.31■■□□□ 1.32
Pcdha9-201ENSMUST00000115659 CenpbP27790 599 aa23.18■■□□□ 1.3
Pcdha9-201ENSMUST00000115659 Ccdc180J3QNE4 1664 aa23.14■■□□□ 1.29
Pcdha9-201ENSMUST00000115659 HrcG5E8J6 738 aa23.12■■□□□ 1.29
Pcdha9-201ENSMUST00000115659 Stra8P70278 393 aa23.09■■□□□ 1.29
Pcdha9-201ENSMUST00000115659 UbtfP25976 765 aaKnown RBP22.96■■□□□ 1.27
Pcdha9-201ENSMUST00000115659 Rtl1Q7M732 1744 aa22.87■■□□□ 1.25
Pcdha9-201ENSMUST00000115659 Cdk11bP24788 784 aaKnown RBP22.66■■□□□ 1.22
Pcdha9-201ENSMUST00000115659 Pcgf6Q99NA9 353 aa22.59■■□□□ 1.21
Pcdha9-201ENSMUST00000115659 Amer1Q7TS75 1132 aa22.55■■□□□ 1.2
Pcdha9-201ENSMUST00000115659 Myt1Q8CFC2 1127 aa22.51■■□□□ 1.19
Pcdha9-201ENSMUST00000115659 Slc24a1Q91WD8 1130 aa22.51■■□□□ 1.19
Pcdha9-201ENSMUST00000115659 Tnnt3Q9QZ47 272 aa22.49■■□□□ 1.19
Pcdha9-201ENSMUST00000115659 Il27Q8K3I6 234 aa22.38■■□□□ 1.17
Pcdha9-201ENSMUST00000115659 Nop58Q6DFW4 536 aaKnown RBP22.36■■□□□ 1.17
Pcdha9-201ENSMUST00000115659 Zcchc6Q5BLK4 1491 aaKnown RBP22.34■■□□□ 1.17
Pcdha9-201ENSMUST00000115659 Anp32bQ9EST5 272 aaKnown RBP22.33■■□□□ 1.16
Pcdha9-201ENSMUST00000115659 NrdcQ8BHG1 1161 aa22.31■■□□□ 1.16
Pcdha9-201ENSMUST00000115659 Abcc9P70170 1546 aa22.27■■□□□ 1.16
Pcdha9-201ENSMUST00000115659 NclP09405 707 aaKnown RBP22.23■■□□□ 1.15
Pcdha9-201ENSMUST00000115659 Fam50aQ9WV03 339 aaKnown RBP22.23■■□□□ 1.15
Pcdha9-201ENSMUST00000115659 TonslQ6NZL6 1363 aa22.15■■□□□ 1.14
Pcdha9-201ENSMUST00000115659 NeflP08551 543 aa22.11■■□□□ 1.13
Pcdha9-201ENSMUST00000115659 Supt5hO55201 1082 aaKnown RBP22.1■■□□□ 1.13
Pcdha9-201ENSMUST00000115659 Ap3b1Q9Z1T1 1105 aa22.09■■□□□ 1.13
Pcdha9-201ENSMUST00000115659 Neurod1Q60867 357 aa22.01■■□□□ 1.11
Pcdha9-201ENSMUST00000115659 Mier1Q5UAK0 511 aa21.98■■□□□ 1.11
Pcdha9-201ENSMUST00000115659 Rtl5Q5DTT4 599 aa21.96■■□□□ 1.11
Pcdha9-201ENSMUST00000115659 4933416C03RikQ3V063 378 aa21.95■■□□□ 1.11
Pcdha9-201ENSMUST00000115659 Eif5bQ05D44 1216 aaKnown RBP21.91■■□□□ 1.1
Pcdha9-201ENSMUST00000115659 4930567H17RikQ3V0K5 233 aa21.89■■□□□ 1.09
Pcdha9-201ENSMUST00000115659 Ttbk1Q6PCN3 1308 aa21.87■■□□□ 1.09
Pcdha9-201ENSMUST00000115659 Ppargc1bQ8VHJ7 1014 aa21.84■■□□□ 1.09
Pcdha9-201ENSMUST00000115659 Os9Q8K2C7 672 aa21.82■■□□□ 1.08
Pcdha9-201ENSMUST00000115659 ClspnQ80YR7 1315 aa21.8■■□□□ 1.08
Pcdha9-201ENSMUST00000115659 Abcc8B2RUS7 1588 aa21.71■■□□□ 1.07
Pcdha9-201ENSMUST00000115659 Gm35339A0A140LHH9 1649 aa21.69■■□□□ 1.06
Pcdha9-201ENSMUST00000115659 Npm1Q61937 292 aaKnown RBP21.6■■□□□ 1.05
Pcdha9-201ENSMUST00000115659 Anp32aO35381 247 aa21.58■■□□□ 1.04
Pcdha9-201ENSMUST00000115659 Plekhg3Q4VAC9 1341 aa21.57■■□□□ 1.04
Pcdha9-201ENSMUST00000115659 Dcaf1Q80TR8 1506 aa21.55■■□□□ 1.04
Pcdha9-201ENSMUST00000115659 Lmod2Q3UHZ5 550 aa21.52■■□□□ 1.04
Pcdha9-201ENSMUST00000115659 Brd4Q9ESU6 1400 aaKnown RBP21.49■■□□□ 1.03
Pcdha9-201ENSMUST00000115659 Cep164Q5DU05 1446 aa21.48■■□□□ 1.03
Pcdha9-201ENSMUST00000115659 Ccer2J3QPU5 274 aa21.38■■□□□ 1.01
Pcdha9-201ENSMUST00000115659 Anks4bQ8K3X6 423 aa21.37■■□□□ 1.01
Pcdha9-201ENSMUST00000115659 Clip1Q922J3 1391 aa21.35■■□□□ 1.01
Pcdha9-201ENSMUST00000115659 Hdac5Q9Z2V6 1113 aa21.35■■□□□ 1.01
Pcdha9-201ENSMUST00000115659 Sall2Q9QX96 1004 aa21.29■■□□□ 1
Pcdha9-201ENSMUST00000115659 Hnrnpul2Q00PI9 745 aaKnown RBP21.28■■□□□ 1
Pcdha9-201ENSMUST00000115659 Zbtb7cQ8VCZ7 619 aa21.25■□□□□ 0.99
Pcdha9-201ENSMUST00000115659 Eid3Q3V124 375 aa21.21■□□□□ 0.99
Pcdha9-201ENSMUST00000115659 Aplp2Q06335 707 aa21.2■□□□□ 0.99
Pcdha9-201ENSMUST00000115659 DaxxO35613 739 aa21.2■□□□□ 0.98
Pcdha9-201ENSMUST00000115659 Chic1Q8CBW7 227 aa21.19■□□□□ 0.98
Pcdha9-201ENSMUST00000115659 Nlrp6Q91WS2 869 aa21.18■□□□□ 0.98
Pcdha9-201ENSMUST00000115659 DiexfQ8BTT6 772 aaKnown RBP21.13■□□□□ 0.97
Pcdha9-201ENSMUST00000115659 Mapk8ip2Q9ERE9 830 aa21.09■□□□□ 0.97
Pcdha9-201ENSMUST00000115659 Upf2A2AT37 1269 aaKnown RBP21.07■□□□□ 0.96
Pcdha9-201ENSMUST00000115659 Rb1cc1Q9ESK9 1588 aa21.06■□□□□ 0.96
Pcdha9-201ENSMUST00000115659 Csrnp3P59055 597 aa21.05■□□□□ 0.96
Pcdha9-201ENSMUST00000115659 Gm13697A2AK42 830 aa21.05■□□□□ 0.96
Pcdha9-201ENSMUST00000115659 Erich6D3Z6S9 713 aa21.04■□□□□ 0.96
Pcdha9-201ENSMUST00000115659 Calr4Q3TQS0 420 aa21.01■□□□□ 0.95
Pcdha9-201ENSMUST00000115659 Zbtb4Q5F293 982 aa21.01■□□□□ 0.95
Pcdha9-201ENSMUST00000115659 Atp1b4Q99ME6 356 aa20.92■□□□□ 0.94
Pcdha9-201ENSMUST00000115659 Polr3glQ8R0C0 218 aa20.92■□□□□ 0.94
Pcdha9-201ENSMUST00000115659 Gm38655A0A286YDK6 273 aa20.89■□□□□ 0.93
Pcdha9-201ENSMUST00000115659 Ppp4r2Q0VGB7 417 aa20.87■□□□□ 0.93
Pcdha9-201ENSMUST00000115659 BlmO88700 1416 aa20.86■□□□□ 0.93
Pcdha9-201ENSMUST00000115659 Ifnlr1Q8CGK5 535 aa20.85■□□□□ 0.93
Pcdha9-201ENSMUST00000115659 Clstn2Q9ER65 966 aa20.85■□□□□ 0.93
Pcdha9-201ENSMUST00000115659 Wdr43Q6ZQL4 677 aaKnown RBP20.84■□□□□ 0.93
Pcdha9-201ENSMUST00000115659 Mrs2Q5NCE8 434 aa20.82■□□□□ 0.92
Pcdha9-201ENSMUST00000115659 Prdm10Q3UTQ7 1184 aa20.79■□□□□ 0.92
Pcdha9-201ENSMUST00000115659 Fkbp15Q6P9Q6 1216 aaKnown RBP20.78■□□□□ 0.92
Pcdha9-201ENSMUST00000115659 Ubl4bQ9CQ84 188 aa20.78■□□□□ 0.92
Pcdha9-201ENSMUST00000115659 Ccdc9Q8VC31 543 aaKnown RBP20.76■□□□□ 0.91
Pcdha9-201ENSMUST00000115659 Chic2Q9D9G3 165 aa20.76■□□□□ 0.91
Pcdha9-201ENSMUST00000115659 Setd5Q5XJV7 1441 aa20.75■□□□□ 0.91
Pcdha9-201ENSMUST00000115659 Gm13695A2AK44 830 aa20.74■□□□□ 0.91
Pcdha9-201ENSMUST00000115659 ArxO35085 564 aa20.69■□□□□ 0.9
Pcdha9-201ENSMUST00000115659 Golga3P55937 1487 aa20.68■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 144.9 ms