Protein–RNA interactions for Protein: Q2MH31

Smrp1, Spermatid-specific manchette-related protein 1, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smrp1Q2MH31 Gm25239-201ENSMUST00000174915 86 ntBASIC31.13■■■□□ 2.57
Smrp1Q2MH31 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Smrp1Q2MH31 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Smrp1Q2MH31 Gm24109-201ENSMUST00000175489 103 ntBASIC27.16■■□□□ 1.94
Smrp1Q2MH31 Gm15042-201ENSMUST00000120212 883 ntBASIC26.9■■□□□ 1.9
Smrp1Q2MH31 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Smrp1Q2MH31 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Smrp1Q2MH31 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Smrp1Q2MH31 Gm15045-201ENSMUST00000117359 883 ntBASIC26.22■■□□□ 1.79
Smrp1Q2MH31 Gm23366-201ENSMUST00000175022 89 ntBASIC25.98■■□□□ 1.75
Smrp1Q2MH31 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Smrp1Q2MH31 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.43■■□□□ 1.66
Smrp1Q2MH31 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.22■■□□□ 1.63
Smrp1Q2MH31 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.17■■□□□ 1.62
Smrp1Q2MH31 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Smrp1Q2MH31 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Smrp1Q2MH31 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Smrp1Q2MH31 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Smrp1Q2MH31 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Smrp1Q2MH31 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Smrp1Q2MH31 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.73■■□□□ 1.55
Smrp1Q2MH31 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Smrp1Q2MH31 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Smrp1Q2MH31 Gm25238-201ENSMUST00000174914 89 ntBASIC24.66■■□□□ 1.54
Smrp1Q2MH31 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Smrp1Q2MH31 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Smrp1Q2MH31 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
Smrp1Q2MH31 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Smrp1Q2MH31 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Smrp1Q2MH31 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.08■■□□□ 1.45
Smrp1Q2MH31 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smrp1Q2MH31 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
Smrp1Q2MH31 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smrp1Q2MH31 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smrp1Q2MH31 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.87■■□□□ 1.41
Smrp1Q2MH31 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smrp1Q2MH31 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.84■■□□□ 1.41
Smrp1Q2MH31 Gm25262-201ENSMUST00000174934 133 ntBASIC23.83■■□□□ 1.41
Smrp1Q2MH31 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smrp1Q2MH31 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.67■■□□□ 1.38
Smrp1Q2MH31 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.62■■□□□ 1.37
Smrp1Q2MH31 Gm27325-201ENSMUST00000175467 74 ntBASIC23.5■■□□□ 1.35
Smrp1Q2MH31 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.46■■□□□ 1.35
Smrp1Q2MH31 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.44■■□□□ 1.34
Smrp1Q2MH31 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Smrp1Q2MH31 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Smrp1Q2MH31 Gm26115-201ENSMUST00000175605 87 ntBASIC23.36■■□□□ 1.33
Smrp1Q2MH31 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.33
Smrp1Q2MH31 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Smrp1Q2MH31 Rab21-202ENSMUST00000218831 843 ntBASIC23.3■■□□□ 1.32
Smrp1Q2MH31 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.28■■□□□ 1.32
Smrp1Q2MH31 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smrp1Q2MH31 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smrp1Q2MH31 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smrp1Q2MH31 Gm8109-201ENSMUST00000194076 746 ntBASIC23.19■■□□□ 1.3
Smrp1Q2MH31 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Smrp1Q2MH31 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Smrp1Q2MH31 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smrp1Q2MH31 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smrp1Q2MH31 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.11■■□□□ 1.29
Smrp1Q2MH31 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Smrp1Q2MH31 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.95■■□□□ 1.26
Smrp1Q2MH31 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.95■■□□□ 1.26
Smrp1Q2MH31 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Smrp1Q2MH31 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.85■■□□□ 1.25
Smrp1Q2MH31 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smrp1Q2MH31 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smrp1Q2MH31 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smrp1Q2MH31 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Smrp1Q2MH31 Psd-208ENSMUST00000224556 2034 ntBASIC22.7■■□□□ 1.22
Smrp1Q2MH31 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smrp1Q2MH31 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.68■■□□□ 1.22
Smrp1Q2MH31 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.67■■□□□ 1.22
Smrp1Q2MH31 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Smrp1Q2MH31 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smrp1Q2MH31 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Smrp1Q2MH31 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smrp1Q2MH31 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Smrp1Q2MH31 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.58■■□□□ 1.21
Smrp1Q2MH31 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.55■■□□□ 1.2
Smrp1Q2MH31 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.52■■□□□ 1.2
Smrp1Q2MH31 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smrp1Q2MH31 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
Smrp1Q2MH31 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.4■■□□□ 1.18
Smrp1Q2MH31 Gm24804-201ENSMUST00000174982 85 ntBASIC22.39■■□□□ 1.17
Smrp1Q2MH31 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.37■■□□□ 1.17
Smrp1Q2MH31 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Smrp1Q2MH31 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smrp1Q2MH31 Gm27322-201ENSMUST00000184007 104 ntBASIC22.33■■□□□ 1.17
Smrp1Q2MH31 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smrp1Q2MH31 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smrp1Q2MH31 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Smrp1Q2MH31 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.29■■□□□ 1.16
Smrp1Q2MH31 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Smrp1Q2MH31 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Smrp1Q2MH31 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smrp1Q2MH31 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.23■■□□□ 1.15
Smrp1Q2MH31 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.21■■□□□ 1.15
Smrp1Q2MH31 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smrp1Q2MH31 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms