Protein–RNA interactions for Protein: Q6DIC6

Tro, Tro protein, mousemouse

Predictions only

Length 2,087 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TroQ6DIC6 Gm25239-201ENSMUST00000174915 86 ntBASIC28.11■■■□□ 2.09
TroQ6DIC6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TroQ6DIC6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TroQ6DIC6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TroQ6DIC6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TroQ6DIC6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
TroQ6DIC6 Gm15042-201ENSMUST00000120212 883 ntBASIC24.59■■□□□ 1.53
TroQ6DIC6 Gm24109-201ENSMUST00000175489 103 ntBASIC24.39■■□□□ 1.5
TroQ6DIC6 Gm15045-201ENSMUST00000117359 883 ntBASIC24.28■■□□□ 1.48
TroQ6DIC6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TroQ6DIC6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TroQ6DIC6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TroQ6DIC6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TroQ6DIC6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TroQ6DIC6 Psd-208ENSMUST00000224556 2034 ntBASIC23.74■■□□□ 1.39
TroQ6DIC6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TroQ6DIC6 Gm23366-201ENSMUST00000175022 89 ntBASIC23.39■■□□□ 1.33
TroQ6DIC6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TroQ6DIC6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TroQ6DIC6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.31■■□□□ 1.32
TroQ6DIC6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TroQ6DIC6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TroQ6DIC6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TroQ6DIC6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TroQ6DIC6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
TroQ6DIC6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TroQ6DIC6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
TroQ6DIC6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TroQ6DIC6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TroQ6DIC6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.77■■□□□ 1.24
TroQ6DIC6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TroQ6DIC6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.7■■□□□ 1.23
TroQ6DIC6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TroQ6DIC6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
TroQ6DIC6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TroQ6DIC6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.5■■□□□ 1.19
TroQ6DIC6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.48■■□□□ 1.19
TroQ6DIC6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TroQ6DIC6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TroQ6DIC6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
TroQ6DIC6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TroQ6DIC6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TroQ6DIC6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TroQ6DIC6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TroQ6DIC6 Gm25238-201ENSMUST00000174914 89 ntBASIC22.16■■□□□ 1.14
TroQ6DIC6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TroQ6DIC6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.12■■□□□ 1.13
TroQ6DIC6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TroQ6DIC6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
TroQ6DIC6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TroQ6DIC6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.98■■□□□ 1.11
TroQ6DIC6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TroQ6DIC6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TroQ6DIC6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TroQ6DIC6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TroQ6DIC6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TroQ6DIC6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TroQ6DIC6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.82■■□□□ 1.08
TroQ6DIC6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TroQ6DIC6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TroQ6DIC6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TroQ6DIC6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TroQ6DIC6 Gm27325-201ENSMUST00000175467 74 ntBASIC21.7■■□□□ 1.06
TroQ6DIC6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TroQ6DIC6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TroQ6DIC6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.62■■□□□ 1.05
TroQ6DIC6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TroQ6DIC6 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.6■■□□□ 1.05
TroQ6DIC6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TroQ6DIC6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TroQ6DIC6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.51■■□□□ 1.03
TroQ6DIC6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TroQ6DIC6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
TroQ6DIC6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.47■■□□□ 1.03
TroQ6DIC6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.42■■□□□ 1.02
TroQ6DIC6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TroQ6DIC6 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.4■■□□□ 1.02
TroQ6DIC6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TroQ6DIC6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TroQ6DIC6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TroQ6DIC6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.32■■□□□ 1
TroQ6DIC6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TroQ6DIC6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.3■■□□□ 1
TroQ6DIC6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TroQ6DIC6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TroQ6DIC6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.28■■□□□ 1
TroQ6DIC6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TroQ6DIC6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TroQ6DIC6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TroQ6DIC6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TroQ6DIC6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TroQ6DIC6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TroQ6DIC6 Rab21-202ENSMUST00000218831 843 ntBASIC21.08■□□□□ 0.97
TroQ6DIC6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.05■□□□□ 0.96
TroQ6DIC6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TroQ6DIC6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TroQ6DIC6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TroQ6DIC6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TroQ6DIC6 Gm25262-201ENSMUST00000174934 133 ntBASIC21.01■□□□□ 0.95
TroQ6DIC6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms