Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Gm25239-201ENSMUST00000174915 86 ntBASIC38.77■■■■□ 3.8
Alms1Q8K4E0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.04■■■■□ 3.36
Alms1Q8K4E0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
Alms1Q8K4E0 Gm24109-201ENSMUST00000175489 103 ntBASIC34.01■■■■□ 3.04
Alms1Q8K4E0 Gm15042-201ENSMUST00000120212 883 ntBASIC33.32■■■□□ 2.92
Alms1Q8K4E0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.85
Alms1Q8K4E0 Gm15045-201ENSMUST00000117359 883 ntBASIC32.88■■■□□ 2.85
Alms1Q8K4E0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Alms1Q8K4E0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Alms1Q8K4E0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Alms1Q8K4E0 Gm23366-201ENSMUST00000175022 89 ntBASIC32.15■■■□□ 2.74
Alms1Q8K4E0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Alms1Q8K4E0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.75■■■□□ 2.67
Alms1Q8K4E0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.65■■■□□ 2.66
Alms1Q8K4E0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Alms1Q8K4E0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Alms1Q8K4E0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Alms1Q8K4E0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Alms1Q8K4E0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.23■■■□□ 2.59
Alms1Q8K4E0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
Alms1Q8K4E0 Gm25238-201ENSMUST00000174914 89 ntBASIC30.9■■■□□ 2.54
Alms1Q8K4E0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Alms1Q8K4E0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.83■■■□□ 2.53
Alms1Q8K4E0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Alms1Q8K4E0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
Alms1Q8K4E0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.6■■■□□ 2.49
Alms1Q8K4E0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Alms1Q8K4E0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Alms1Q8K4E0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Alms1Q8K4E0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Alms1Q8K4E0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.41
Alms1Q8K4E0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
Alms1Q8K4E0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Alms1Q8K4E0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Alms1Q8K4E0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
Alms1Q8K4E0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.9■■■□□ 2.38
Alms1Q8K4E0 Gm25262-201ENSMUST00000174934 133 ntBASIC29.75■■■□□ 2.35
Alms1Q8K4E0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.68■■■□□ 2.34
Alms1Q8K4E0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
Alms1Q8K4E0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.62■■■□□ 2.33
Alms1Q8K4E0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Alms1Q8K4E0 Psd-208ENSMUST00000224556 2034 ntBASIC29.46■■■□□ 2.31
Alms1Q8K4E0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Alms1Q8K4E0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Alms1Q8K4E0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
Alms1Q8K4E0 Gm27325-201ENSMUST00000175467 74 ntBASIC29.35■■■□□ 2.29
Alms1Q8K4E0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Alms1Q8K4E0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.27■■■□□ 2.28
Alms1Q8K4E0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.26■■■□□ 2.27
Alms1Q8K4E0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Alms1Q8K4E0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.16■■■□□ 2.26
Alms1Q8K4E0 Gm26115-201ENSMUST00000175605 87 ntBASIC29.16■■■□□ 2.26
Alms1Q8K4E0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.13■■■□□ 2.25
Alms1Q8K4E0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.09■■■□□ 2.25
Alms1Q8K4E0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.98■■■□□ 2.23
Alms1Q8K4E0 Rab21-202ENSMUST00000218831 843 ntBASIC28.95■■■□□ 2.23
Alms1Q8K4E0 Gm8109-201ENSMUST00000194076 746 ntBASIC28.93■■■□□ 2.22
Alms1Q8K4E0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Alms1Q8K4E0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Alms1Q8K4E0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Alms1Q8K4E0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Alms1Q8K4E0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Alms1Q8K4E0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Alms1Q8K4E0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.74■■■□□ 2.19
Alms1Q8K4E0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.74■■■□□ 2.19
Alms1Q8K4E0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Alms1Q8K4E0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.68■■■□□ 2.18
Alms1Q8K4E0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Alms1Q8K4E0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.65■■■□□ 2.18
Alms1Q8K4E0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Alms1Q8K4E0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Alms1Q8K4E0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.59■■■□□ 2.17
Alms1Q8K4E0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Alms1Q8K4E0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.52■■■□□ 2.16
Alms1Q8K4E0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Alms1Q8K4E0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Alms1Q8K4E0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.32■■■□□ 2.12
Alms1Q8K4E0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Alms1Q8K4E0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Alms1Q8K4E0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Alms1Q8K4E0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Alms1Q8K4E0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Alms1Q8K4E0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Alms1Q8K4E0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Alms1Q8K4E0 Gm24804-201ENSMUST00000174982 85 ntBASIC28.1■■■□□ 2.09
Alms1Q8K4E0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Alms1Q8K4E0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.06■■■□□ 2.08
Alms1Q8K4E0 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.03■■■□□ 2.08
Alms1Q8K4E0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Alms1Q8K4E0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.02■■■□□ 2.08
Alms1Q8K4E0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
Alms1Q8K4E0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28■■■□□ 2.07
Alms1Q8K4E0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Alms1Q8K4E0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Alms1Q8K4E0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Alms1Q8K4E0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
Alms1Q8K4E0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Alms1Q8K4E0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Alms1Q8K4E0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Alms1Q8K4E0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms