Protein–RNA interactions for Protein: P28662

Bri3, Brain protein I3, mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bri3P28662 Gm25239-201ENSMUST00000174915 86 ntBASIC29.43■■■□□ 2.3
Bri3P28662 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Bri3P28662 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Bri3P28662 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Bri3P28662 Gm24109-201ENSMUST00000175489 103 ntBASIC25.62■■□□□ 1.69
Bri3P28662 Gm15042-201ENSMUST00000120212 883 ntBASIC25.51■■□□□ 1.67
Bri3P28662 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Bri3P28662 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Bri3P28662 Gm15045-201ENSMUST00000117359 883 ntBASIC24.89■■□□□ 1.58
Bri3P28662 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Bri3P28662 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Bri3P28662 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Bri3P28662 Gm23366-201ENSMUST00000175022 89 ntBASIC24.53■■□□□ 1.52
Bri3P28662 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Bri3P28662 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Bri3P28662 Psd-208ENSMUST00000224556 2034 ntBASIC24.13■■□□□ 1.45
Bri3P28662 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.06■■□□□ 1.44
Bri3P28662 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.98■■□□□ 1.43
Bri3P28662 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Bri3P28662 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Bri3P28662 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Bri3P28662 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.78■■□□□ 1.4
Bri3P28662 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
Bri3P28662 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Bri3P28662 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Bri3P28662 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Bri3P28662 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Bri3P28662 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Bri3P28662 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.53■■□□□ 1.36
Bri3P28662 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Bri3P28662 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Bri3P28662 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Bri3P28662 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Bri3P28662 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Bri3P28662 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Bri3P28662 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Bri3P28662 Gm25238-201ENSMUST00000174914 89 ntBASIC23.3■■□□□ 1.32
Bri3P28662 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Bri3P28662 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.29■■□□□ 1.32
Bri3P28662 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.19■■□□□ 1.3
Bri3P28662 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Bri3P28662 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Bri3P28662 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.81■■□□□ 1.24
Bri3P28662 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Bri3P28662 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
Bri3P28662 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Bri3P28662 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Bri3P28662 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Bri3P28662 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Bri3P28662 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.57■■□□□ 1.2
Bri3P28662 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Bri3P28662 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Bri3P28662 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Bri3P28662 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.49■■□□□ 1.19
Bri3P28662 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.46■■□□□ 1.19
Bri3P28662 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Bri3P28662 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Bri3P28662 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Bri3P28662 Gm25262-201ENSMUST00000174934 133 ntBASIC22.42■■□□□ 1.18
Bri3P28662 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Bri3P28662 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.39■■□□□ 1.17
Bri3P28662 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Bri3P28662 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.33■■□□□ 1.17
Bri3P28662 Gm27325-201ENSMUST00000175467 74 ntBASIC22.3■■□□□ 1.16
Bri3P28662 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Bri3P28662 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Bri3P28662 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Bri3P28662 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Bri3P28662 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
Bri3P28662 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Bri3P28662 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.11■■□□□ 1.13
Bri3P28662 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Bri3P28662 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Bri3P28662 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.03■■□□□ 1.12
Bri3P28662 Rab21-202ENSMUST00000218831 843 ntBASIC22.03■■□□□ 1.12
Bri3P28662 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.01■■□□□ 1.11
Bri3P28662 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Bri3P28662 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22■■□□□ 1.11
Bri3P28662 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Bri3P28662 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.98■■□□□ 1.11
Bri3P28662 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Bri3P28662 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Bri3P28662 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Bri3P28662 Gm26115-201ENSMUST00000175605 87 ntBASIC21.94■■□□□ 1.1
Bri3P28662 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.91■■□□□ 1.1
Bri3P28662 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Bri3P28662 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Bri3P28662 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Bri3P28662 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
Bri3P28662 Gm8109-201ENSMUST00000194076 746 ntBASIC21.82■■□□□ 1.08
Bri3P28662 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Bri3P28662 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Bri3P28662 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Bri3P28662 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.77■■□□□ 1.08
Bri3P28662 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Bri3P28662 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Bri3P28662 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.74■■□□□ 1.07
Bri3P28662 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Bri3P28662 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Bri3P28662 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms