RNA–Protein interactions for RNA: YPL260W

YPL260W, Transcript of Putative substrate of cAMP-dependent protein kinase (PKA), yeastyeast

Gene YPL260W, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPL260WYPL260W PEP1P32319 1579 aa5.58□□□□□ -1.52
YPL260WYPL260W HSP82P02829 709 aaKnown RBP5.57□□□□□ -1.52
YPL260WYPL260W IKI3Q06706 1349 aaKnown RBP5.57□□□□□ -1.52
YPL260WYPL260W OPY1P38271 328 aa5.56□□□□□ -1.52
YPL260WYPL260W IOC2Q12072 812 aa5.56□□□□□ -1.52
YPL260WYPL260W SPT7P35177 1332 aa5.55□□□□□ -1.52
YPL260WYPL260W EAF7P53911 425 aaKnown RBP5.55□□□□□ -1.52
YPL260WYPL260W YAP5P40574 245 aa5.54□□□□□ -1.52
YPL260WYPL260W ULI1P43604 169 aa5.54□□□□□ -1.52
YPL260WYPL260W SNF7P39929 240 aaKnown RBP5.53□□□□□ -1.52
YPL260WYPL260W YTA7P40340 1379 aa5.53□□□□□ -1.52
YPL260WYPL260W TRM732Q03496 1420 aa5.53□□□□□ -1.52
YPL260WYPL260W RNA1P11745 407 aaKnown RBP5.53□□□□□ -1.52
YPL260WYPL260W TOP2P06786 1428 aaKnown RBP5.52□□□□□ -1.53
YPL260WYPL260W FPR4Q06205 392 aaPredicted RBP5.52□□□□□ -1.53
YPL260WYPL260W NUP170P38181 1502 aa5.5□□□□□ -1.53
YPL260WYPL260W SPT2P06843 333 aaPredicted RBP5.5□□□□□ -1.53
YPL260WYPL260W SPC110P32380 944 aa5.5□□□□□ -1.53
YPL260WYPL260W PAF1P38351 445 aa5.5□□□□□ -1.53
YPL260WYPL260W NMD2P38798 1089 aaKnown RBP5.5□□□□□ -1.53
YPL260WYPL260W SRB8P25648 1427 aa5.5□□□□□ -1.53
YPL260WYPL260W FUN12P39730 1002 aaKnown RBP5.49□□□□□ -1.53
YPL260WYPL260W NAP1P25293 417 aaKnown RBP5.48□□□□□ -1.53
YPL260WYPL260W BUD4P47136 1447 aa5.48□□□□□ -1.53
YPL260WYPL260W YLR419WQ06698 1435 aaKnown RBP5.48□□□□□ -1.53
YPL260WYPL260W GTT3P39996 337 aa5.47□□□□□ -1.53
YPL260WYPL260W IRC20Q06554 1556 aa5.46□□□□□ -1.54
YPL260WYPL260W YIR014WP40570 242 aa5.46□□□□□ -1.54
YPL260WYPL260W PIL1P53252 339 aaKnown RBP5.45□□□□□ -1.54
YPL260WYPL260W NOP58Q12499 511 aaKnown RBP5.45□□□□□ -1.54
YPL260WYPL260W ROX1P25042 368 aa5.44□□□□□ -1.54
YPL260WYPL260W MMS1Q06211 1407 aa5.44□□□□□ -1.54
YPL260WYPL260W RPC31P17890 251 aa5.43□□□□□ -1.54
YPL260WYPL260W SMC3P47037 1230 aa5.43□□□□□ -1.54
YPL260WYPL260W VPS4P52917 437 aa5.43□□□□□ -1.54
YPL260WYPL260W CFT1Q06632 1357 aaKnown RBP5.43□□□□□ -1.54
YPL260WYPL260W RIM101P33400 625 aa5.43□□□□□ -1.54
YPL260WYPL260W PSH1Q12161 406 aa5.43□□□□□ -1.54
YPL260WYPL260W THO2P53552 1597 aaKnown RBP5.42□□□□□ -1.54
YPL260WYPL260W YPK9Q12697 1472 aa5.42□□□□□ -1.54
YPL260WYPL260W ABP1P15891 592 aaKnown RBP5.42□□□□□ -1.54
YPL260WYPL260W CHZ1P40019 153 aaPredicted RBP5.42□□□□□ -1.54
YPL260WYPL260W YNL011CP53980 444 aa5.42□□□□□ -1.54
YPL260WYPL260W SAS10Q12136 610 aaPredicted RBP5.42□□□□□ -1.54
YPL260WYPL260W MYO4P32492 1471 aa5.42□□□□□ -1.54
YPL260WYPL260W EDE1P34216 1381 aa5.41□□□□□ -1.54
YPL260WYPL260W BYE1P36106 594 aa5.4□□□□□ -1.54
YPL260WYPL260W PDR10P51533 1564 aa5.4□□□□□ -1.54
YPL260WYPL260W SMC4Q12267 1418 aa5.4□□□□□ -1.54
YPL260WYPL260W MLP2P40457 1679 aa5.4□□□□□ -1.54
YPL260WYPL260W RTG1P32607 177 aa5.4□□□□□ -1.55
YPL260WYPL260W BCK2P33306 851 aa5.4□□□□□ -1.55
YPL260WYPL260W NOT3P06102 836 aaKnown RBP5.39□□□□□ -1.55
YPL260WYPL260W RPN1P38764 993 aaKnown RBP5.39□□□□□ -1.55
YPL260WYPL260W MSH4P40965 878 aaPredicted RBP5.39□□□□□ -1.55
YPL260WYPL260W NCR1Q12200 1170 aa5.38□□□□□ -1.55
YPL260WYPL260W CTR9P89105 1077 aa5.37□□□□□ -1.55
YPL260WYPL260W RGA1P39083 1007 aa5.37□□□□□ -1.55
YPL260WYPL260W TAN1P53072 289 aaPredicted RBP5.37□□□□□ -1.55
YPL260WYPL260W IOC4Q04213 475 aa5.37□□□□□ -1.55
YPL260WYPL260W MYO2P19524 1574 aaKnown RBP5.36□□□□□ -1.55
YPL260WYPL260W SLN1P39928 1220 aaPredicted RBP5.36□□□□□ -1.55
YPL260WYPL260W SSM4P40318 1319 aa5.35□□□□□ -1.55
YPL260WYPL260W STU1P38198 1513 aa5.35□□□□□ -1.55
YPL260WYPL260W NST1P53935 1240 aa5.35□□□□□ -1.55
YPL260WYPL260W SRP54P20424 541 aaKnown RBP5.34□□□□□ -1.55
YPL260WYPL260W RPS0AP32905 252 aaKnown RBP5.34□□□□□ -1.55
YPL260WYPL260W RAD26P40352 1085 aa5.34□□□□□ -1.55
YPL260WYPL260W NNF2P53253 936 aa5.34□□□□□ -1.55
YPL260WYPL260W PET111P08468 800 aa5.34□□□□□ -1.56
YPL260WYPL260W LTV1P34078 463 aa5.33□□□□□ -1.56
YPL260WYPL260W SIC1P38634 284 aa5.33□□□□□ -1.56
YPL260WYPL260W PRP3Q03338 469 aaPredicted RBP5.32□□□□□ -1.56
YPL260WYPL260W CBF5P33322 483 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
YPL260WYPL260W NOP8Q08287 484 aaPredicted RBP5.31□□□□□ -1.56
YPL260WYPL260W SNU71P53207 620 aaKnown RBP5.3□□□□□ -1.56
YPL260WYPL260W PIB1Q06651 286 aa5.3□□□□□ -1.56
YPL260WYPL260W ETT1Q08421 412 aaKnown RBP5.3□□□□□ -1.56
YPL260WYPL260W SPT6P23615 1451 aaKnown RBP5.3□□□□□ -1.56
YPL260WYPL260W TAF2P23255 1407 aa5.29□□□□□ -1.56
YPL260WYPL260W GEA1P47102 1408 aaPredicted RBP5.29□□□□□ -1.56
YPL260WYPL260W MSH3P25336 1018 aa5.29□□□□□ -1.56
YPL260WYPL260W SWI3P32591 825 aa5.29□□□□□ -1.56
YPL260WYPL260W TCD1P38756 429 aa5.29□□□□□ -1.56
YPL260WYPL260W DSN1P40568 576 aa5.29□□□□□ -1.56
YPL260WYPL260W YPP1P46951 817 aa5.29□□□□□ -1.56
YPL260WYPL260W YSH1Q06224 779 aaPredicted RBP5.29□□□□□ -1.56
YPL260WYPL260W PAN1P32521 1480 aa5.28□□□□□ -1.56
YPL260WYPL260W VPS24P36095 224 aaKnown RBP5.28□□□□□ -1.56
YPL260WYPL260W CIN4P39110 191 aa5.28□□□□□ -1.56
YPL260WYPL260W RTT106P40161 455 aa5.28□□□□□ -1.56
YPL260WYPL260W VPS72Q03388 795 aa5.28□□□□□ -1.56
YPL260WYPL260W RLP24Q07915 199 aaKnown RBP5.28□□□□□ -1.56
YPL260WYPL260W NOP14Q99207 810 aaKnown RBP5.28□□□□□ -1.56
YPL260WYPL260W DNA2P38859 1522 aa5.28□□□□□ -1.56
YPL260WYPL260W TRP5P00931 707 aaKnown RBP5.28□□□□□ -1.56
YPL260WYPL260W MSP1P28737 362 aa5.28□□□□□ -1.56
YPL260WYPL260W MHP1P43638 1398 aa5.27□□□□□ -1.57
YPL260WYPL260W PCT1P13259 424 aa5.27□□□□□ -1.57
YPL260WYPL260W EAP1P36041 632 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms