Protein–RNA interactions for Protein: P89105

CTR9, RNA polymerase-associated protein CTR9, yeastyeast

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTR9P89105 NSR1YGR159C 1245 nt21.89■■□□□ 1.09
CTR9P89105 YML009W-BYML009W-B 477 nt21.72■■□□□ 1.07
CTR9P89105 NOP1YDL014W 984 nt20.88■□□□□ 0.93
CTR9P89105 MDJ1YFL016C 1536 nt20.25■□□□□ 0.83
CTR9P89105 YKL036CYKL036C 393 nt18.83■□□□□ 0.6
CTR9P89105 YJL027CYJL027C 417 nt18.5■□□□□ 0.55
CTR9P89105 SRX1YKL086W 384 nt18.21■□□□□ 0.51
CTR9P89105 Q0297Q0297 156 nt18.07■□□□□ 0.48
CTR9P89105 DBP2YNL112W 1641 nt17.62■□□□□ 0.41
CTR9P89105 SSA3YBL075C 1950 nt17.59■□□□□ 0.41
CTR9P89105 YBR190WYBR190W 312 nt17.4■□□□□ 0.38
CTR9P89105 YCR051WYCR051W 669 nt17.33■□□□□ 0.36
CTR9P89105 RTC3YHR087W 336 nt16.96■□□□□ 0.31
CTR9P89105 SCS3YGL126W 1143 nt16.9■□□□□ 0.3
CTR9P89105 TRN1tP(UGG)A 72 nt16.73■□□□□ 0.27
CTR9P89105 SUF9tP(UGG)F 72 nt16.73■□□□□ 0.27
CTR9P89105 SUF8tP(UGG)H 72 nt16.73■□□□□ 0.27
CTR9P89105 tP(UGG)LtP(UGG)L 72 nt16.73■□□□□ 0.27
CTR9P89105 SUF7tP(UGG)M 72 nt16.73■□□□□ 0.27
CTR9P89105 tP(UGG)N1tP(UGG)N1 72 nt16.73■□□□□ 0.27
CTR9P89105 tP(UGG)N2tP(UGG)N2 72 nt16.73■□□□□ 0.27
CTR9P89105 tP(UGG)O1tP(UGG)O1 72 nt16.73■□□□□ 0.27
CTR9P89105 SUF11tP(UGG)O2 72 nt16.73■□□□□ 0.27
CTR9P89105 CCC1YLR220W 969 nt16.67■□□□□ 0.26
CTR9P89105 PUT4YOR348C 1884 nt16.55■□□□□ 0.24
CTR9P89105 YOL085CYOL085C 342 nt16.33■□□□□ 0.2
CTR9P89105 RVS167YDR388W 1449 nt16.3■□□□□ 0.2
CTR9P89105 RPP1BYDL130W 321 nt16.25■□□□□ 0.19
CTR9P89105 PKP1YIL042C 1185 nt16.21■□□□□ 0.19
CTR9P89105 SCJ1YMR214W 1134 nt16.11■□□□□ 0.17
CTR9P89105 ARE1YCR048W 1833 nt16■□□□□ 0.15
CTR9P89105 POA1YBR022W 534 nt15.95■□□□□ 0.14
CTR9P89105 SPT5YML010W 3192 nt15.8■□□□□ 0.12
CTR9P89105 BSC6YOL137W 1494 nt15.76■□□□□ 0.11
CTR9P89105 YHR049C-AYHR049C-A 297 nt15.75■□□□□ 0.11
CTR9P89105 SAH1YER043C 1350 nt15.72■□□□□ 0.11
CTR9P89105 tP(UGG)O3tP(UGG)O3 72 nt15.71■□□□□ 0.11
CTR9P89105 URN1YPR152C 1398 nt15.61■□□□□ 0.09
CTR9P89105 PET122YER153C 765 nt15.6■□□□□ 0.09
CTR9P89105 SHR5YOL110W 714 nt15.59■□□□□ 0.09
CTR9P89105 SSA4YER103W 1929 nt15.56■□□□□ 0.08
CTR9P89105 OPI9YLR338W 858 nt15.54■□□□□ 0.08
CTR9P89105 DEP1YAL013W 1218 nt15.41■□□□□ 0.06
CTR9P89105 SCR1SCR1 522 nt15.31■□□□□ 0.04
CTR9P89105 BUD23YCR047C 828 nt15.29■□□□□ 0.04
CTR9P89105 YDJ1YNL064C 1230 nt15.15■□□□□ 0.02
CTR9P89105 RPN10YHR200W 807 nt15.12■□□□□ 0.01
CTR9P89105 RRN5YLR141W 1092 nt15.12■□□□□ 0.01
CTR9P89105 BDF1YLR399C 2061 nt15.12■□□□□ 0.01
CTR9P89105 PTC2YER089C 1395 nt15.07■□□□□ 0
CTR9P89105 YNL208WYNL208W 600 nt15.03■□□□□ -0
CTR9P89105 PUN1YLR414C 792 nt15.02■□□□□ -0
CTR9P89105 GAR1YHR089C 618 nt14.98□□□□□ -0.01
CTR9P89105 ATS1YAL020C 1002 nt14.98□□□□□ -0.01
CTR9P89105 NAB2YGL122C 1578 nt14.94□□□□□ -0.02
CTR9P89105 MEP2YNL142W 1500 nt14.87□□□□□ -0.03
CTR9P89105 TAT1YBR069C 1860 nt14.85□□□□□ -0.03
CTR9P89105 YJR018WYJR018W 363 nt14.81□□□□□ -0.04
CTR9P89105 YER088W-BYER088W-B 147 nt14.8□□□□□ -0.04
CTR9P89105 FIS1YIL065C 468 nt14.72□□□□□ -0.05
CTR9P89105 RSB1YOR049C 1065 nt14.7□□□□□ -0.06
CTR9P89105 DCW1YKL046C 1350 nt14.69□□□□□ -0.06
CTR9P89105 DAL1YIR027C 1383 nt14.59□□□□□ -0.07
CTR9P89105 FPR4YLR449W 1179 nt14.55□□□□□ -0.08
CTR9P89105 YJR120WYJR120W 351 nt14.54□□□□□ -0.08
CTR9P89105 YPS1YLR120C 1710 nt14.52□□□□□ -0.08
CTR9P89105 PAC11YDR488C 1602 nt14.52□□□□□ -0.08
CTR9P89105 PHO4YFR034C 939 nt14.48□□□□□ -0.09
CTR9P89105 YBR220CYBR220C 1683 nt14.47□□□□□ -0.09
CTR9P89105 TIR1YER011W 765 nt14.47□□□□□ -0.09
CTR9P89105 EMI2YDR516C 1503 nt14.4□□□□□ -0.1
CTR9P89105 SSA1YAL005C 1929 nt14.38□□□□□ -0.11
CTR9P89105 YHR165W-AYHR165W-A 312 nt14.37□□□□□ -0.11
CTR9P89105 INM2YDR287W 879 nt14.34□□□□□ -0.11
CTR9P89105 RPP2BYDR382W 333 nt14.32□□□□□ -0.12
CTR9P89105 YDR095CYDR095C 411 nt14.27□□□□□ -0.13
CTR9P89105 YMR090WYMR090W 684 nt14.24□□□□□ -0.13
CTR9P89105 SDH1YKL148C 1923 nt14.22□□□□□ -0.13
CTR9P89105 YDL221WYDL221W 552 nt14.21□□□□□ -0.13
CTR9P89105 CAC2YML102W 1407 nt14.2□□□□□ -0.14
CTR9P89105 NVJ2YPR091C 2313 nt14.14□□□□□ -0.15
CTR9P89105 PTP1YDL230W 1008 nt14.13□□□□□ -0.15
CTR9P89105 YBL100CYBL100C 315 nt14.11□□□□□ -0.15
CTR9P89105 PCH2YBR186W 1695 nt14.1□□□□□ -0.15
CTR9P89105 GUT2YIL155C 1950 nt14.09□□□□□ -0.15
CTR9P89105 SRB2YHR041C 633 nt14.06□□□□□ -0.16
CTR9P89105 Q0182Q0182 405 nt14.05□□□□□ -0.16
CTR9P89105 SCC4YER147C 1875 nt13.99□□□□□ -0.17
CTR9P89105 RPP2AYOL039W 321 nt13.98□□□□□ -0.17
CTR9P89105 IRC15YPL017C 1500 nt13.96□□□□□ -0.17
CTR9P89105 PIB2YGL023C 1908 nt13.94□□□□□ -0.18
CTR9P89105 FUN26YAL022C 1554 nt13.94□□□□□ -0.18
CTR9P89105 SEC11YIR022W 504 nt13.93□□□□□ -0.18
CTR9P89105 PST2YDR032C 597 nt13.92□□□□□ -0.18
CTR9P89105 BDH2YAL061W 1254 nt13.92□□□□□ -0.18
CTR9P89105 MOT3YMR070W 1473 nt13.92□□□□□ -0.18
CTR9P89105 GIS3YLR094C 1509 nt13.89□□□□□ -0.19
CTR9P89105 ALF1YNL148C 765 nt13.83□□□□□ -0.2
CTR9P89105 YSC84YHR016C 1407 nt13.81□□□□□ -0.2
CTR9P89105 TRM9YML014W 840 nt13.78□□□□□ -0.2
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms