RNA–Protein interactions for RNA: YPL260W

YPL260W, Transcript of Putative substrate of cAMP-dependent protein kinase (PKA), yeastyeast

Gene YPL260W, Length 1,656 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPL260WYPL260W FAP1P53971 965 aa9.45□□□□□ -0.9
YPL260WYPL260W PRY3P47033 881 aa8.97□□□□□ -0.97
YPL260WYPL260W MTC1P47018 478 aaKnown RBP8.57□□□□□ -1.04
YPL260WYPL260W YCK3P39962 524 aa8.49□□□□□ -1.05
YPL260WYPL260W HAA1Q12753 694 aaKnown RBP8.27□□□□□ -1.09
YPL260WYPL260W AAD16Q02895 342 aa8.24□□□□□ -1.09
YPL260WYPL260W PRI1P10363 409 aa8.1□□□□□ -1.11
YPL260WYPL260W TSR3Q12094 313 aaKnown RBP7.61□□□□□ -1.19
YPL260WYPL260W BUD31P25337 157 aaPredicted RBP7.44□□□□□ -1.22
YPL260WYPL260W RPG1P38249 964 aaKnown RBP7.44□□□□□ -1.22
YPL260WYPL260W ISW2Q08773 1120 aa7.41□□□□□ -1.22
YPL260WYPL260W YGL015CP33199 130 aa7.37□□□□□ -1.23
YPL260WYPL260W MRPL32P25348 183 aa7.26□□□□□ -1.25
YPL260WYPL260W DRS1P32892 752 aaKnown RBP7.02□□□□□ -1.29
YPL260WYPL260W BFR2Q06631 534 aaKnown RBP6.98□□□□□ -1.29
YPL260WYPL260W SIS1P25294 352 aaKnown RBP6.94□□□□□ -1.3
YPL260WYPL260W RQC2Q12532 1038 aaKnown RBP6.84□□□□□ -1.32
YPL260WYPL260W CDC27P38042 758 aa6.7□□□□□ -1.34
YPL260WYPL260W MAP2P38174 421 aaKnown RBP6.64□□□□□ -1.35
YPL260WYPL260W UBP10P53874 792 aaPredicted RBP6.6□□□□□ -1.35
YPL260WYPL260W UBP9P39967 754 aa6.59□□□□□ -1.35
YPL260WYPL260W NOP2P40991 618 aaKnown RBP6.48□□□□□ -1.37
YPL260WYPL260W RSE1Q04693 1361 aaKnown RBP6.45□□□□□ -1.38
YPL260WYPL260W REB1P21538 810 aa6.45□□□□□ -1.38
YPL260WYPL260W RPL17AP05740 184 aaKnown RBP6.38□□□□□ -1.39
YPL260WYPL260W RPL17BP46990 184 aaKnown RBP6.38□□□□□ -1.39
YPL260WYPL260W TGL3P40308 642 aa6.36□□□□□ -1.39
YPL260WYPL260W CAB3P36076 571 aa6.34□□□□□ -1.39
YPL260WYPL260W EBP2P36049 427 aaKnown RBP6.32□□□□□ -1.4
YPL260WYPL260W TIF4632P39936 914 aaKnown RBP6.32□□□□□ -1.4
YPL260WYPL260W SKI3P17883 1432 aaKnown RBP6.29□□□□□ -1.4
YPL260WYPL260W YKR023WP36119 530 aaKnown RBP6.29□□□□□ -1.4
YPL260WYPL260W URN1Q06525 465 aaKnown RBP6.27□□□□□ -1.41
YPL260WYPL260W SPA2P23201 1466 aaKnown RBP6.26□□□□□ -1.41
YPL260WYPL260W DIP2Q12220 943 aaPredicted RBP6.25□□□□□ -1.41
YPL260WYPL260W SCY1P53009 804 aa6.23□□□□□ -1.41
YPL260WYPL260W DCD1P06773 312 aa6.22□□□□□ -1.41
YPL260WYPL260W SLX5P32828 619 aaKnown RBP6.2□□□□□ -1.42
YPL260WYPL260W NSR1P27476 414 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
YPL260WYPL260W HOP09932 586 aa6.17□□□□□ -1.42
YPL260WYPL260W SIS2P36024 562 aa6.17□□□□□ -1.42
YPL260WYPL260W TFC8Q12308 588 aa6.14□□□□□ -1.43
YPL260WYPL260W YBL029C-AQ3E756 94 aa6.1□□□□□ -1.43
YPL260WYPL260W TAF7Q05021 590 aa6.09□□□□□ -1.43
YPL260WYPL260W SPT21P35209 758 aa5.99□□□□□ -1.45
YPL260WYPL260W SSN2P38931 1420 aa5.99□□□□□ -1.45
YPL260WYPL260W AVT3P36062 692 aa5.97□□□□□ -1.45
YPL260WYPL260W YPR148CQ06523 435 aa5.96□□□□□ -1.46
YPL260WYPL260W AIR2Q12476 344 aaKnown RBP5.95□□□□□ -1.46
YPL260WYPL260W TCB3Q03640 1545 aaKnown RBP5.95□□□□□ -1.46
YPL260WYPL260W VNX1P42839 908 aa5.94□□□□□ -1.46
YPL260WYPL260W YJL171CP46992 396 aa5.92□□□□□ -1.46
YPL260WYPL260W MST1P07236 462 aa5.91□□□□□ -1.46
YPL260WYPL260W SGS1P35187 1447 aa5.9□□□□□ -1.46
YPL260WYPL260W BCH2P36122 765 aa5.89□□□□□ -1.47
YPL260WYPL260W ENP1P38333 483 aaKnown RBP5.89□□□□□ -1.47
YPL260WYPL260W TCB2P48231 1178 aa5.89□□□□□ -1.47
YPL260WYPL260W YFR016CP43597 1233 aaKnown RBP5.88□□□□□ -1.47
YPL260WYPL260W RPS0BP46654 252 aaKnown RBP5.88□□□□□ -1.47
YPL260WYPL260W SPP1Q03012 353 aa5.88□□□□□ -1.47
YPL260WYPL260W TFA1P36100 482 aa5.86□□□□□ -1.47
YPL260WYPL260W FKH1P40466 484 aa5.85□□□□□ -1.47
YPL260WYPL260W CHD1P32657 1468 aa5.84□□□□□ -1.48
YPL260WYPL260W MNN4P36044 1178 aa5.82□□□□□ -1.48
YPL260WYPL260W YOR238WQ08634 303 aa5.81□□□□□ -1.48
YPL260WYPL260W RLF2Q12495 606 aa5.79□□□□□ -1.48
YPL260WYPL260W STH1P32597 1359 aa5.79□□□□□ -1.48
YPL260WYPL260W QCR6P00127 147 aa5.78□□□□□ -1.48
YPL260WYPL260W WSC3Q12215 556 aa5.78□□□□□ -1.48
YPL260WYPL260W YRB30P53107 440 aaPredicted RBP5.77□□□□□ -1.49
YPL260WYPL260W NOP53Q12080 455 aaKnown RBP5.73□□□□□ -1.49
YPL260WYPL260W UFD4P33202 1483 aa5.73□□□□□ -1.49
YPL260WYPL260W MMS22Q06164 1454 aa5.72□□□□□ -1.49
YPL260WYPL260W BMT6Q12291 365 aa5.72□□□□□ -1.49
YPL260WYPL260W SEC3P33332 1336 aaKnown RBP5.71□□□□□ -1.5
YPL260WYPL260W CLC1P17891 233 aa5.7□□□□□ -1.5
YPL260WYPL260W TIF11P38912 153 aaKnown RBP5.7□□□□□ -1.5
YPL260WYPL260W RGA2Q06407 1009 aa5.7□□□□□ -1.5
YPL260WYPL260W SPP41P38904 1435 aa5.7□□□□□ -1.5
YPL260WYPL260W INO80P53115 1489 aa5.68□□□□□ -1.5
YPL260WYPL260W RIX1P38883 763 aaPredicted RBP5.68□□□□□ -1.5
YPL260WYPL260W IME2P32581 645 aa5.66□□□□□ -1.5
YPL260WYPL260W ECM5Q03214 1411 aa5.66□□□□□ -1.5
YPL260WYPL260W KRI1P42846 591 aaKnown RBP5.65□□□□□ -1.51
YPL260WYPL260W DEF1P35732 738 aaKnown RBP5.64□□□□□ -1.51
YPL260WYPL260W BDF1P35817 686 aa5.64□□□□□ -1.51
YPL260WYPL260W NUG1P40010 520 aaKnown RBP5.64□□□□□ -1.51
YPL260WYPL260W FPR3P38911 411 aaKnown RBP5.63□□□□□ -1.51
YPL260WYPL260W YGR130CP53278 816 aa5.63□□□□□ -1.51
YPL260WYPL260W CWC22P53333 577 aaKnown RBP5.63□□□□□ -1.51
YPL260WYPL260W LDB19Q12502 818 aa5.63□□□□□ -1.51
YPL260WYPL260W PRS1P32895 427 aaKnown RBP5.63□□□□□ -1.51
YPL260WYPL260W LEO1P38439 464 aa5.63□□□□□ -1.51
YPL260WYPL260W EPS1P40557 701 aa5.63□□□□□ -1.51
YPL260WYPL260W XRN1P22147 1528 aaKnown RBP5.61□□□□□ -1.51
YPL260WYPL260W POL5P39985 1022 aaKnown RBP5.61□□□□□ -1.51
YPL260WYPL260W AIM44Q99299 758 aa5.61□□□□□ -1.51
YPL260WYPL260W ENV11P53246 860 aa5.59□□□□□ -1.52
YPL260WYPL260W PLP2Q12017 286 aa5.59□□□□□ -1.52
YPL260WYPL260W MON2P48563 1636 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms