RNA–Protein interactions for RNA: YDL128W

VCX1, Transcript of Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity, yeastyeast

Gene VCX1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VCX1YDL128W EDS1P38073 919 aa8.57□□□□□ -1.04
VCX1YDL128W SGS1P35187 1447 aa8.55□□□□□ -1.04
VCX1YDL128W COQ8P27697 501 aa8.55□□□□□ -1.04
VCX1YDL128W YEL023CP39992 682 aa8.55□□□□□ -1.04
VCX1YDL128W TFG1P41895 735 aaPredicted RBP8.55□□□□□ -1.04
VCX1YDL128W PTC3P34221 468 aaKnown RBP8.54□□□□□ -1.04
VCX1YDL128W JIP4Q03361 876 aa8.54□□□□□ -1.04
VCX1YDL128W DAN4P47179 1161 aa8.53□□□□□ -1.04
VCX1YDL128W ATH1P48016 1211 aa8.53□□□□□ -1.04
VCX1YDL128W PTC4P38089 393 aa8.5□□□□□ -1.05
VCX1YDL128W SAP30P38429 201 aa8.49□□□□□ -1.05
VCX1YDL128W GUT1P32190 709 aa8.47□□□□□ -1.05
VCX1YDL128W YDL129WQ07555 291 aa8.44□□□□□ -1.06
VCX1YDL128W SSN2P38931 1420 aa8.44□□□□□ -1.06
VCX1YDL128W PML39Q03760 334 aa8.39□□□□□ -1.07
VCX1YDL128W SOL3P38858 249 aa8.36□□□□□ -1.07
VCX1YDL128W NST1P53935 1240 aa8.33□□□□□ -1.08
VCX1YDL128W MID1P41821 548 aa8.31□□□□□ -1.08
VCX1YDL128W NOP53Q12080 455 aaKnown RBP8.31□□□□□ -1.08
VCX1YDL128W SET1P38827 1080 aaKnown RBP8.3□□□□□ -1.08
VCX1YDL128W YDR344CQ05510 147 aa8.3□□□□□ -1.08
VCX1YDL128W CHL1P22516 861 aaPredicted RBP8.29□□□□□ -1.08
VCX1YDL128W PRE3P38624 215 aa8.29□□□□□ -1.08
VCX1YDL128W INO80P53115 1489 aa8.29□□□□□ -1.08
VCX1YDL128W MPH3P0CE00 602 aa8.28□□□□□ -1.08
VCX1YDL128W YGR273CP53329 174 aa8.28□□□□□ -1.08
VCX1YDL128W AI4P03878 556 aa8.27□□□□□ -1.09
VCX1YDL128W ILV3P39522 585 aaKnown RBP8.27□□□□□ -1.09
VCX1YDL128W ELP4Q02884 456 aaKnown RBP8.26□□□□□ -1.09
VCX1YDL128W PEX29Q03370 554 aa8.25□□□□□ -1.09
VCX1YDL128W SKI3P17883 1432 aaKnown RBP8.21□□□□□ -1.09
VCX1YDL128W BCK2P33306 851 aa8.21□□□□□ -1.1
VCX1YDL128W ARH1P48360 493 aa8.17□□□□□ -1.1
VCX1YDL128W KEX1P09620 729 aa8.14□□□□□ -1.11
VCX1YDL128W VRP1P37370 817 aa8.14□□□□□ -1.11
VCX1YDL128W SLI15P38283 698 aa8.14□□□□□ -1.11
VCX1YDL128W MPC54Q08550 464 aa8.14□□□□□ -1.11
VCX1YDL128W VHR2P40041 505 aa8.13□□□□□ -1.11
VCX1YDL128W HAP5Q02516 242 aa8.11□□□□□ -1.11
VCX1YDL128W YLR326WQ06170 240 aaKnown RBP8.09□□□□□ -1.11
VCX1YDL128W MON2P48563 1636 aaPredicted RBP8.09□□□□□ -1.11
VCX1YDL128W SPT23P35210 1082 aa8.08□□□□□ -1.12
VCX1YDL128W TCB3Q03640 1545 aaKnown RBP8.08□□□□□ -1.12
VCX1YDL128W TY1B-DR4Q07793 1604 aa8.07□□□□□ -1.12
VCX1YDL128W UBP14P38237 781 aaKnown RBP8.07□□□□□ -1.12
VCX1YDL128W NMA111P53920 997 aa8.07□□□□□ -1.12
VCX1YDL128W RQC2Q12532 1038 aaKnown RBP8.07□□□□□ -1.12
VCX1YDL128W DPL1Q05567 589 aa8.06□□□□□ -1.12
VCX1YDL128W IFH1P39520 1085 aa8.04□□□□□ -1.12
VCX1YDL128W PCS60P38137 543 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
VCX1YDL128W CDC73Q06697 393 aa8.03□□□□□ -1.12
VCX1YDL128W RAD54P32863 898 aa8.02□□□□□ -1.13
VCX1YDL128W PTC2P39966 464 aaKnown RBP8.02□□□□□ -1.13
VCX1YDL128W BNI4P53858 892 aa8.02□□□□□ -1.13
VCX1YDL128W XDJ1P39102 459 aa8.01□□□□□ -1.13
VCX1YDL128W VPS70P47161 811 aa7.99□□□□□ -1.13
VCX1YDL128W KIC1P38692 1080 aa7.97□□□□□ -1.13
VCX1YDL128W YPR148CQ06523 435 aa7.97□□□□□ -1.13
VCX1YDL128W ISU2Q12056 156 aa7.96□□□□□ -1.14
VCX1YDL128W YDR090CQ03193 310 aa7.95□□□□□ -1.14
VCX1YDL128W REF2P42073 533 aaPredicted RBP7.94□□□□□ -1.14
VCX1YDL128W YML082WQ04533 649 aaKnown RBP7.94□□□□□ -1.14
VCX1YDL128W NOP2P40991 618 aaKnown RBP7.93□□□□□ -1.14
VCX1YDL128W RPP1BP10622 106 aaKnown RBP7.9□□□□□ -1.14
VCX1YDL128W DMA1P38823 416 aa7.9□□□□□ -1.14
VCX1YDL128W YPR015CQ12531 247 aa7.9□□□□□ -1.14
VCX1YDL128W CHD1P32657 1468 aa7.89□□□□□ -1.15
VCX1YDL128W DPS1P04802 557 aaKnown RBP7.89□□□□□ -1.15
VCX1YDL128W PDR1P12383 1068 aa7.89□□□□□ -1.15
VCX1YDL128W SWR1Q05471 1514 aa7.88□□□□□ -1.15
VCX1YDL128W HSL1P34244 1518 aa7.87□□□□□ -1.15
VCX1YDL128W MMS22Q06164 1454 aa7.87□□□□□ -1.15
VCX1YDL128W RAM1P22007 431 aa7.85□□□□□ -1.15
VCX1YDL128W PEX21P50091 288 aa7.85□□□□□ -1.15
VCX1YDL128W YRR1Q12172 810 aa7.83□□□□□ -1.16
VCX1YDL128W GYP1Q08484 637 aa7.82□□□□□ -1.16
VCX1YDL128W SPT6P23615 1451 aaKnown RBP7.81□□□□□ -1.16
VCX1YDL128W COX6P00427 148 aa7.8□□□□□ -1.16
VCX1YDL128W TUM1Q08686 304 aaKnown RBP7.79□□□□□ -1.16
VCX1YDL128W XRN1P22147 1528 aaKnown RBP7.78□□□□□ -1.16
VCX1YDL128W ORC6P38826 435 aa7.78□□□□□ -1.16
VCX1YDL128W CSC1Q06538 782 aa7.78□□□□□ -1.16
VCX1YDL128W MAK21Q12176 1025 aaKnown RBP7.78□□□□□ -1.16
VCX1YDL128W GAP1P19145 602 aaPredicted RBP7.76□□□□□ -1.17
VCX1YDL128W TFB4Q12004 338 aa7.76□□□□□ -1.17
VCX1YDL128W CKB1P43639 278 aa7.75□□□□□ -1.17
VCX1YDL128W THO2P53552 1597 aaKnown RBP7.75□□□□□ -1.17
VCX1YDL128W PBS2P08018 668 aa7.74□□□□□ -1.17
VCX1YDL128W HIR3P47171 1648 aa7.72□□□□□ -1.17
VCX1YDL128W RAS1P01119 309 aa7.72□□□□□ -1.17
VCX1YDL128W NUD1P32336 851 aa7.72□□□□□ -1.17
VCX1YDL128W UFD4P33202 1483 aa7.72□□□□□ -1.17
VCX1YDL128W MVP1P40959 511 aaKnown RBP7.71□□□□□ -1.18
VCX1YDL128W STR2P47164 639 aa7.71□□□□□ -1.18
VCX1YDL128W ISM1P48526 1002 aa7.7□□□□□ -1.18
VCX1YDL128W BUD20Q08004 166 aaPredicted RBP7.7□□□□□ -1.18
VCX1YDL128W NPL4P33755 580 aa7.69□□□□□ -1.18
VCX1YDL128W SAS4Q04003 481 aa7.68□□□□□ -1.18
VCX1YDL128W REV3P14284 1504 aa7.68□□□□□ -1.18
VCX1YDL128W PRT1P06103 763 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms