Protein–RNA interactions for Protein: P48016

ATH1, Vacuolar acid trehalase, yeastyeast

Predictions only

Length 1,211 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATH1P48016 YML009W-BYML009W-B 477 nt20.93■□□□□ 0.94
ATH1P48016 NOP1YDL014W 984 nt20.58■□□□□ 0.89
ATH1P48016 NSR1YGR159C 1245 nt20.34■□□□□ 0.85
ATH1P48016 YKL036CYKL036C 393 nt19.4■□□□□ 0.7
ATH1P48016 YJL027CYJL027C 417 nt18.23■□□□□ 0.51
ATH1P48016 Q0297Q0297 156 nt18.09■□□□□ 0.49
ATH1P48016 SRX1YKL086W 384 nt17.92■□□□□ 0.46
ATH1P48016 SCS3YGL126W 1143 nt17.87■□□□□ 0.45
ATH1P48016 MDJ1YFL016C 1536 nt17.57■□□□□ 0.4
ATH1P48016 YCR051WYCR051W 669 nt17.1■□□□□ 0.33
ATH1P48016 YOL085CYOL085C 342 nt16.76■□□□□ 0.27
ATH1P48016 PKP1YIL042C 1185 nt16.47■□□□□ 0.23
ATH1P48016 SCJ1YMR214W 1134 nt16.46■□□□□ 0.23
ATH1P48016 YGR139WYGR139W 339 nt16.38■□□□□ 0.21
ATH1P48016 RPP1BYDL130W 321 nt16.26■□□□□ 0.19
ATH1P48016 ATS1YAL020C 1002 nt16.13■□□□□ 0.17
ATH1P48016 Q0182Q0182 405 nt15.9■□□□□ 0.14
ATH1P48016 TRN1tP(UGG)A 72 nt15.89■□□□□ 0.13
ATH1P48016 SUF9tP(UGG)F 72 nt15.89■□□□□ 0.13
ATH1P48016 SUF8tP(UGG)H 72 nt15.89■□□□□ 0.13
ATH1P48016 tP(UGG)LtP(UGG)L 72 nt15.89■□□□□ 0.13
ATH1P48016 SUF7tP(UGG)M 72 nt15.89■□□□□ 0.13
ATH1P48016 tP(UGG)N1tP(UGG)N1 72 nt15.89■□□□□ 0.13
ATH1P48016 tP(UGG)N2tP(UGG)N2 72 nt15.89■□□□□ 0.13
ATH1P48016 tP(UGG)O1tP(UGG)O1 72 nt15.89■□□□□ 0.13
ATH1P48016 SUF11tP(UGG)O2 72 nt15.89■□□□□ 0.13
ATH1P48016 MOT3YMR070W 1473 nt15.89■□□□□ 0.13
ATH1P48016 CCC1YLR220W 969 nt15.81■□□□□ 0.12
ATH1P48016 DBP2YNL112W 1641 nt15.68■□□□□ 0.1
ATH1P48016 SCR1SCR1 522 nt15.52■□□□□ 0.08
ATH1P48016 PET122YER153C 765 nt15.46■□□□□ 0.07
ATH1P48016 NME1NME1 340 nt15.29■□□□□ 0.04
ATH1P48016 tP(UGG)O3tP(UGG)O3 72 nt15.21■□□□□ 0.03
ATH1P48016 RRN5YLR141W 1092 nt15.08■□□□□ 0
ATH1P48016 RVS167YDR388W 1449 nt15.01□□□□□ -0.01
ATH1P48016 RTC3YHR087W 336 nt15□□□□□ -0.01
ATH1P48016 RSB1YOR049C 1065 nt14.96□□□□□ -0.01
ATH1P48016 YBR190WYBR190W 312 nt14.87□□□□□ -0.03
ATH1P48016 PST2YDR032C 597 nt14.82□□□□□ -0.04
ATH1P48016 YER088W-BYER088W-B 147 nt14.77□□□□□ -0.05
ATH1P48016 CSM2YIL132C 642 nt14.75□□□□□ -0.05
ATH1P48016 YDJ1YNL064C 1230 nt14.7□□□□□ -0.06
ATH1P48016 YKL097CYKL097C 411 nt14.57□□□□□ -0.08
ATH1P48016 SHR5YOL110W 714 nt14.54□□□□□ -0.08
ATH1P48016 PAU21YOR394W 495 nt14.52□□□□□ -0.09
ATH1P48016 PAU22YPL282C 495 nt14.52□□□□□ -0.09
ATH1P48016 ARO7YPR060C 771 nt14.37□□□□□ -0.11
ATH1P48016 GAR1YHR089C 618 nt14.34□□□□□ -0.11
ATH1P48016 PAM17YKR065C 594 nt14.18□□□□□ -0.14
ATH1P48016 SHU1YHL006C 453 nt14.11□□□□□ -0.15
ATH1P48016 SSA3YBL075C 1950 nt14.11□□□□□ -0.15
ATH1P48016 REG2YBR050C 1017 nt14.05□□□□□ -0.16
ATH1P48016 DEP1YAL013W 1218 nt13.98□□□□□ -0.17
ATH1P48016 VAR1Q0140 1197 nt13.9□□□□□ -0.18
ATH1P48016 YDR509WYDR509W 348 nt13.87□□□□□ -0.19
ATH1P48016 URN1YPR152C 1398 nt13.83□□□□□ -0.19
ATH1P48016 TIR1YER011W 765 nt13.82□□□□□ -0.2
ATH1P48016 RPN10YHR200W 807 nt13.82□□□□□ -0.2
ATH1P48016 YNL208WYNL208W 600 nt13.82□□□□□ -0.2
ATH1P48016 YOR139CYOR139C 393 nt13.81□□□□□ -0.2
ATH1P48016 BUR6YER159C 429 nt13.77□□□□□ -0.21
ATH1P48016 YAL037C-BYAL037C-B 975 nt13.77□□□□□ -0.21
ATH1P48016 BMT5YIL096C 1011 nt13.72□□□□□ -0.21
ATH1P48016 NPL3YDR432W 1245 nt13.7□□□□□ -0.22
ATH1P48016 Q0010Q0010 387 nt13.59□□□□□ -0.23
ATH1P48016 Q0144Q0144 330 nt13.51□□□□□ -0.25
ATH1P48016 OPI9YLR338W 858 nt13.51□□□□□ -0.25
ATH1P48016 SSA1YAL005C 1929 nt13.51□□□□□ -0.25
ATH1P48016 YIR018C-AYIR018C-A 138 nt13.42□□□□□ -0.26
ATH1P48016 YGR021WYGR021W 873 nt13.4□□□□□ -0.26
ATH1P48016 SRN2YLR119W 642 nt13.39□□□□□ -0.27
ATH1P48016 SEM1YDR363W-A 270 nt13.38□□□□□ -0.27
ATH1P48016 ARA2YMR041C 1008 nt13.34□□□□□ -0.27
ATH1P48016 YOL037CYOL037C 354 nt13.34□□□□□ -0.27
ATH1P48016 MNP1YGL068W 585 nt13.33□□□□□ -0.28
ATH1P48016 HOM6YJR139C 1080 nt13.31□□□□□ -0.28
ATH1P48016 SRB2YHR041C 633 nt13.3□□□□□ -0.28
ATH1P48016 SAH1YER043C 1350 nt13.3□□□□□ -0.28
ATH1P48016 WWM1YFL010C 636 nt13.28□□□□□ -0.28
ATH1P48016 tM(CAU)CtM(CAU)C 72 nt13.25□□□□□ -0.29
ATH1P48016 IMT4tM(CAU)E 72 nt13.25□□□□□ -0.29
ATH1P48016 IMT3tM(CAU)J3 72 nt13.25□□□□□ -0.29
ATH1P48016 IMT1tM(CAU)O1 72 nt13.25□□□□□ -0.29
ATH1P48016 IMT2tM(CAU)P 72 nt13.25□□□□□ -0.29
ATH1P48016 YJR018WYJR018W 363 nt13.23□□□□□ -0.29
ATH1P48016 YEL009C-AYEL009C-A 408 nt13.22□□□□□ -0.29
ATH1P48016 RPP2BYDR382W 333 nt13.17□□□□□ -0.3
ATH1P48016 PUN1YLR414C 792 nt13.17□□□□□ -0.3
ATH1P48016 PUT4YOR348C 1884 nt13.16□□□□□ -0.3
ATH1P48016 YLR122CYLR122C 378 nt13.16□□□□□ -0.3
ATH1P48016 RKM5YLR137W 1104 nt13.14□□□□□ -0.31
ATH1P48016 MET8YBR213W 825 nt13.08□□□□□ -0.32
ATH1P48016 ARP10YDR106W 855 nt13.07□□□□□ -0.32
ATH1P48016 YFL021C-AYFL021C-A 855 nt13.07□□□□□ -0.32
ATH1P48016 ABZ2YMR289W 1125 nt13.07□□□□□ -0.32
ATH1P48016 PUS2YGL063W 1113 nt13.03□□□□□ -0.32
ATH1P48016 ARE1YCR048W 1833 nt13.02□□□□□ -0.32
ATH1P48016 YJR120WYJR120W 351 nt13.02□□□□□ -0.33
ATH1P48016 YLR281CYLR281C 468 nt12.96□□□□□ -0.33
ATH1P48016 BDH2YAL061W 1254 nt12.92□□□□□ -0.34
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms