Protein–RNA interactions for Protein: P22516

CHL1, ATP-dependent DNA helicase CHL1, yeastyeast

Predicted RBP Predictions only

Length 861 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHL1P22516 YML009W-BYML009W-B 477 nt20.42■□□□□ 0.86
CHL1P22516 NSR1YGR159C 1245 nt20.04■□□□□ 0.8
CHL1P22516 NOP1YDL014W 984 nt20■□□□□ 0.79
CHL1P22516 YKL036CYKL036C 393 nt18.69■□□□□ 0.58
CHL1P22516 Q0297Q0297 156 nt17.55■□□□□ 0.4
CHL1P22516 YJL027CYJL027C 417 nt17.51■□□□□ 0.39
CHL1P22516 MDJ1YFL016C 1536 nt17.5■□□□□ 0.39
CHL1P22516 SRX1YKL086W 384 nt17.44■□□□□ 0.38
CHL1P22516 SCS3YGL126W 1143 nt17.12■□□□□ 0.33
CHL1P22516 YCR051WYCR051W 669 nt16.59■□□□□ 0.25
CHL1P22516 YOL085CYOL085C 342 nt16.15■□□□□ 0.18
CHL1P22516 PKP1YIL042C 1185 nt15.87■□□□□ 0.13
CHL1P22516 RPP1BYDL130W 321 nt15.76■□□□□ 0.11
CHL1P22516 TRN1tP(UGG)A 72 nt15.58■□□□□ 0.08
CHL1P22516 SUF9tP(UGG)F 72 nt15.58■□□□□ 0.08
CHL1P22516 SUF8tP(UGG)H 72 nt15.58■□□□□ 0.08
CHL1P22516 tP(UGG)LtP(UGG)L 72 nt15.58■□□□□ 0.08
CHL1P22516 SUF7tP(UGG)M 72 nt15.58■□□□□ 0.08
CHL1P22516 tP(UGG)N1tP(UGG)N1 72 nt15.58■□□□□ 0.08
CHL1P22516 tP(UGG)N2tP(UGG)N2 72 nt15.58■□□□□ 0.08
CHL1P22516 tP(UGG)O1tP(UGG)O1 72 nt15.58■□□□□ 0.08
CHL1P22516 SUF11tP(UGG)O2 72 nt15.58■□□□□ 0.08
CHL1P22516 DBP2YNL112W 1641 nt15.55■□□□□ 0.08
CHL1P22516 SCJ1YMR214W 1134 nt15.55■□□□□ 0.08
CHL1P22516 CCC1YLR220W 969 nt15.46■□□□□ 0.07
CHL1P22516 ATS1YAL020C 1002 nt15.39■□□□□ 0.05
CHL1P22516 YGR139WYGR139W 339 nt15.37■□□□□ 0.05
CHL1P22516 PET122YER153C 765 nt15□□□□□ -0.01
CHL1P22516 SCR1SCR1 522 nt14.99□□□□□ -0.01
CHL1P22516 VAR1Q0140 1197 nt14.95□□□□□ -0.02
CHL1P22516 YBR190WYBR190W 312 nt14.88□□□□□ -0.03
CHL1P22516 tP(UGG)O3tP(UGG)O3 72 nt14.84□□□□□ -0.03
CHL1P22516 RVS167YDR388W 1449 nt14.81□□□□□ -0.04
CHL1P22516 RRN5YLR141W 1092 nt14.61□□□□□ -0.07
CHL1P22516 RTC3YHR087W 336 nt14.6□□□□□ -0.07
CHL1P22516 RSB1YOR049C 1065 nt14.42□□□□□ -0.1
CHL1P22516 YDJ1YNL064C 1230 nt14.37□□□□□ -0.11
CHL1P22516 YER088W-BYER088W-B 147 nt14.31□□□□□ -0.12
CHL1P22516 SHR5YOL110W 714 nt14.31□□□□□ -0.12
CHL1P22516 PST2YDR032C 597 nt14.18□□□□□ -0.14
CHL1P22516 GAR1YHR089C 618 nt14□□□□□ -0.17
CHL1P22516 SSA3YBL075C 1950 nt13.99□□□□□ -0.17
CHL1P22516 YDR509WYDR509W 348 nt13.96□□□□□ -0.17
CHL1P22516 YKL097CYKL097C 411 nt13.82□□□□□ -0.2
CHL1P22516 DEP1YAL013W 1218 nt13.8□□□□□ -0.2
CHL1P22516 URN1YPR152C 1398 nt13.74□□□□□ -0.21
CHL1P22516 Q0017Q0017 162 nt13.73□□□□□ -0.21
CHL1P22516 RPN10YHR200W 807 nt13.66□□□□□ -0.22
CHL1P22516 YNL208WYNL208W 600 nt13.64□□□□□ -0.23
CHL1P22516 Q0142Q0142 177 nt13.58□□□□□ -0.24
CHL1P22516 CSM2YIL132C 642 nt13.56□□□□□ -0.24
CHL1P22516 PAM17YKR065C 594 nt13.56□□□□□ -0.24
CHL1P22516 NME1NME1 340 nt13.56□□□□□ -0.24
CHL1P22516 SHU1YHL006C 453 nt13.54□□□□□ -0.24
CHL1P22516 TIR1YER011W 765 nt13.52□□□□□ -0.25
CHL1P22516 OPI9YLR338W 858 nt13.47□□□□□ -0.25
CHL1P22516 Q0144Q0144 330 nt13.45□□□□□ -0.26
CHL1P22516 PAU21YOR394W 495 nt13.44□□□□□ -0.26
CHL1P22516 PAU22YPL282C 495 nt13.44□□□□□ -0.26
CHL1P22516 PUT4YOR348C 1884 nt13.42□□□□□ -0.26
CHL1P22516 ARO7YPR060C 771 nt13.33□□□□□ -0.28
CHL1P22516 SAH1YER043C 1350 nt13.3□□□□□ -0.28
CHL1P22516 YAL037C-BYAL037C-B 975 nt13.26□□□□□ -0.29
CHL1P22516 SSA1YAL005C 1929 nt13.25□□□□□ -0.29
CHL1P22516 BMT5YIL096C 1011 nt13.19□□□□□ -0.3
CHL1P22516 ARE1YCR048W 1833 nt13.16□□□□□ -0.3
CHL1P22516 SEM1YDR363W-A 270 nt13.15□□□□□ -0.3
CHL1P22516 BUR6YER159C 429 nt13.15□□□□□ -0.3
CHL1P22516 YOR139CYOR139C 393 nt13.15□□□□□ -0.3
CHL1P22516 MOT3YMR070W 1473 nt13.14□□□□□ -0.31
CHL1P22516 YJR018WYJR018W 363 nt13.13□□□□□ -0.31
CHL1P22516 PUN1YLR414C 792 nt13.12□□□□□ -0.31
CHL1P22516 REG2YBR050C 1017 nt13.12□□□□□ -0.31
CHL1P22516 NPL3YDR432W 1245 nt13.07□□□□□ -0.32
CHL1P22516 SRB2YHR041C 633 nt13.02□□□□□ -0.33
CHL1P22516 YGR021WYGR021W 873 nt13.01□□□□□ -0.33
CHL1P22516 Q0182Q0182 405 nt13.01□□□□□ -0.33
CHL1P22516 POA1YBR022W 534 nt13.01□□□□□ -0.33
CHL1P22516 RPP2BYDR382W 333 nt12.99□□□□□ -0.33
CHL1P22516 YHR049C-AYHR049C-A 297 nt12.99□□□□□ -0.33
CHL1P22516 AI5_BETAQ0075 1065 nt12.98□□□□□ -0.33
CHL1P22516 Q0255Q0255 1419 nt12.96□□□□□ -0.33
CHL1P22516 WWM1YFL010C 636 nt12.95□□□□□ -0.34
CHL1P22516 HOM6YJR139C 1080 nt12.93□□□□□ -0.34
CHL1P22516 MNP1YGL068W 585 nt12.9□□□□□ -0.34
CHL1P22516 YJR120WYJR120W 351 nt12.9□□□□□ -0.34
CHL1P22516 PTC2YER089C 1395 nt12.87□□□□□ -0.35
CHL1P22516 YOL037CYOL037C 354 nt12.85□□□□□ -0.35
CHL1P22516 YOR169CYOR169C 465 nt12.84□□□□□ -0.35
CHL1P22516 YGL188CYGL188C 174 nt12.83□□□□□ -0.36
CHL1P22516 Q0010Q0010 387 nt12.81□□□□□ -0.36
CHL1P22516 YFL021C-AYFL021C-A 855 nt12.77□□□□□ -0.37
CHL1P22516 YIR018C-AYIR018C-A 138 nt12.75□□□□□ -0.37
CHL1P22516 RKM5YLR137W 1104 nt12.75□□□□□ -0.37
CHL1P22516 BDH2YAL061W 1254 nt12.73□□□□□ -0.37
CHL1P22516 BSC6YOL137W 1494 nt12.72□□□□□ -0.37
CHL1P22516 BUD23YCR047C 828 nt12.71□□□□□ -0.37
CHL1P22516 AI3Q0060 1248 nt12.7□□□□□ -0.38
CHL1P22516 SRN2YLR119W 642 nt12.69□□□□□ -0.38
CHL1P22516 NAB2YGL122C 1578 nt12.69□□□□□ -0.38
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms