RNA–Protein interactions for RNA: YBR159W

IFA38, Transcript of Microsomal beta-keto-reductase, yeastyeast

Gene IFA38, Length 1,044 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IFA38YBR159W IOC2Q12072 812 aa9.68□□□□□ -0.86
IFA38YBR159W LDB19Q12502 818 aa9.66□□□□□ -0.86
IFA38YBR159W HTA1P04911 132 aaKnown RBP9.65□□□□□ -0.86
IFA38YBR159W HTA2P04912 132 aa9.65□□□□□ -0.86
IFA38YBR159W GUT1P32190 709 aa9.65□□□□□ -0.86
IFA38YBR159W TY1B-DR4Q07793 1604 aa9.64□□□□□ -0.87
IFA38YBR159W RTG1P32607 177 aa9.57□□□□□ -0.88
IFA38YBR159W YEL023CP39992 682 aa9.57□□□□□ -0.88
IFA38YBR159W IFH1P39520 1085 aa9.56□□□□□ -0.88
IFA38YBR159W FKH1P40466 484 aa9.56□□□□□ -0.88
IFA38YBR159W YNL035CP53962 389 aaKnown RBP9.55□□□□□ -0.88
IFA38YBR159W SOL3P38858 249 aa9.54□□□□□ -0.88
IFA38YBR159W JIP4Q03361 876 aa9.53□□□□□ -0.88
IFA38YBR159W YPR148CQ06523 435 aa9.53□□□□□ -0.88
IFA38YBR159W PTC4P38089 393 aa9.52□□□□□ -0.89
IFA38YBR159W VPS70P47161 811 aa9.52□□□□□ -0.89
IFA38YBR159W DAN4P47179 1161 aa9.51□□□□□ -0.89
IFA38YBR159W AIR2Q12476 344 aaKnown RBP9.51□□□□□ -0.89
IFA38YBR159W YGR273CP53329 174 aa9.5□□□□□ -0.89
IFA38YBR159W NST1P53935 1240 aa9.5□□□□□ -0.89
IFA38YBR159W HSL1P34244 1518 aa9.49□□□□□ -0.89
IFA38YBR159W SPT6P23615 1451 aaKnown RBP9.48□□□□□ -0.89
IFA38YBR159W SEC61P32915 480 aa9.48□□□□□ -0.89
IFA38YBR159W SAS10Q12136 610 aaPredicted RBP9.47□□□□□ -0.89
IFA38YBR159W NCR1Q12200 1170 aa9.47□□□□□ -0.89
IFA38YBR159W MON2P48563 1636 aaPredicted RBP9.46□□□□□ -0.89
IFA38YBR159W MPH3P0CE00 602 aa9.42□□□□□ -0.9
IFA38YBR159W TFG1P41895 735 aaPredicted RBP9.42□□□□□ -0.9
IFA38YBR159W AI4P03878 556 aa9.41□□□□□ -0.9
IFA38YBR159W ILV3P39522 585 aaKnown RBP9.41□□□□□ -0.9
IFA38YBR159W VHR2P40041 505 aa9.41□□□□□ -0.9
IFA38YBR159W YJL171CP46992 396 aa9.41□□□□□ -0.9
IFA38YBR159W KEX1P09620 729 aa9.37□□□□□ -0.91
IFA38YBR159W UBP14P38237 781 aaKnown RBP9.37□□□□□ -0.91
IFA38YBR159W REF2P42073 533 aaPredicted RBP9.37□□□□□ -0.91
IFA38YBR159W PML39Q03760 334 aa9.37□□□□□ -0.91
IFA38YBR159W YLR326WQ06170 240 aaKnown RBP9.37□□□□□ -0.91
IFA38YBR159W CKB1P43639 278 aa9.35□□□□□ -0.91
IFA38YBR159W BMT6Q12291 365 aa9.35□□□□□ -0.91
IFA38YBR159W YDL129WQ07555 291 aa9.34□□□□□ -0.91
IFA38YBR159W SWR1Q05471 1514 aa9.33□□□□□ -0.92
IFA38YBR159W SAP30P38429 201 aa9.33□□□□□ -0.92
IFA38YBR159W HIR3P47171 1648 aa9.33□□□□□ -0.92
IFA38YBR159W MID1P41821 548 aa9.32□□□□□ -0.92
IFA38YBR159W YDR090CQ03193 310 aa9.29□□□□□ -0.92
IFA38YBR159W XRN1P22147 1528 aaKnown RBP9.29□□□□□ -0.92
IFA38YBR159W RAD54P32863 898 aa9.28□□□□□ -0.92
IFA38YBR159W PCS60P38137 543 aaKnown RBP RIP-Chip data9.28□□□□□ -0.92not detected
IFA38YBR159W SLI15P38283 698 aa9.28□□□□□ -0.92
IFA38YBR159W PBS2P08018 668 aa9.26□□□□□ -0.93
IFA38YBR159W KIC1P38692 1080 aa9.25□□□□□ -0.93
IFA38YBR159W PEX29Q03370 554 aa9.23□□□□□ -0.93
IFA38YBR159W THO2P53552 1597 aaKnown RBP9.23□□□□□ -0.93
IFA38YBR159W SPB4P25808 606 aaPredicted RBP9.22□□□□□ -0.93
IFA38YBR159W MAK21Q12176 1025 aaKnown RBP9.22□□□□□ -0.93
IFA38YBR159W COX6P00427 148 aa9.21□□□□□ -0.94
IFA38YBR159W YDR344CQ05510 147 aa9.21□□□□□ -0.94
IFA38YBR159W REV3P14284 1504 aa9.2□□□□□ -0.94
IFA38YBR159W MPC54Q08550 464 aa9.19□□□□□ -0.94
IFA38YBR159W SIN3P22579 1536 aa9.19□□□□□ -0.94
IFA38YBR159W CDC73Q06697 393 aa9.18□□□□□ -0.94
IFA38YBR159W DSF2P38213 736 aa9.16□□□□□ -0.94
IFA38YBR159W ELP4Q02884 456 aaKnown RBP9.14□□□□□ -0.95
IFA38YBR159W DPL1Q05567 589 aa9.14□□□□□ -0.95
IFA38YBR159W MAM3Q12296 706 aa9.14□□□□□ -0.95
IFA38YBR159W PRE3P38624 215 aa9.13□□□□□ -0.95
IFA38YBR159W ARH1P48360 493 aa9.13□□□□□ -0.95
IFA38YBR159W NMA111P53920 997 aa9.11□□□□□ -0.95
IFA38YBR159W SSK2P53599 1579 aa9.11□□□□□ -0.95
IFA38YBR159W CHL1P22516 861 aaPredicted RBP9.1□□□□□ -0.95
IFA38YBR159W MYO2P19524 1574 aaKnown RBP9.1□□□□□ -0.95
IFA38YBR159W RPP1BP10622 106 aaKnown RBP9.09□□□□□ -0.95
IFA38YBR159W IES2P40154 320 aa9.09□□□□□ -0.95
IFA38YBR159W HAP5Q02516 242 aa9.09□□□□□ -0.95
IFA38YBR159W KOG1P38873 1557 aa9.08□□□□□ -0.96
IFA38YBR159W ORC6P38826 435 aa9.08□□□□□ -0.96
IFA38YBR159W TAF2P23255 1407 aa9.07□□□□□ -0.96
IFA38YBR159W SKI3P17883 1432 aaKnown RBP9.06□□□□□ -0.96
IFA38YBR159W ISU2Q12056 156 aa9.06□□□□□ -0.96
IFA38YBR159W GAP1P19145 602 aaPredicted RBP9.02□□□□□ -0.97
IFA38YBR159W SPT23P35210 1082 aa9.02□□□□□ -0.97
IFA38YBR159W NUP42P49686 430 aaKnown RBP9.02□□□□□ -0.97
IFA38YBR159W CHD1P32657 1468 aa9.02□□□□□ -0.97
IFA38YBR159W ESP1Q03018 1630 aa9.02□□□□□ -0.97
IFA38YBR159W PEX21P50091 288 aa9.01□□□□□ -0.97
IFA38YBR159W CSC1Q06538 782 aa9.01□□□□□ -0.97
IFA38YBR159W BUD4P47136 1447 aa9□□□□□ -0.97
IFA38YBR159W DIT2P21595 489 aa9□□□□□ -0.97
IFA38YBR159W BNI4P53858 892 aa9□□□□□ -0.97
IFA38YBR159W MVP1P40959 511 aaKnown RBP8.98□□□□□ -0.97
IFA38YBR159W TFB4Q12004 338 aa8.97□□□□□ -0.97
IFA38YBR159W DNA2P38859 1522 aa8.96□□□□□ -0.97
IFA38YBR159W RGR1P19263 1082 aa8.96□□□□□ -0.98
IFA38YBR159W PSE1P32337 1089 aaKnown RBP8.96□□□□□ -0.98
IFA38YBR159W PTC2P39966 464 aaKnown RBP8.96□□□□□ -0.98
IFA38YBR159W TUM1Q08686 304 aaKnown RBP8.96□□□□□ -0.98
IFA38YBR159W YRR1Q12172 810 aa8.96□□□□□ -0.98
IFA38YBR159W PDR1P12383 1068 aa8.95□□□□□ -0.98
IFA38YBR159W LEU3P08638 886 aa8.93□□□□□ -0.98
IFA38YBR159W YPR109WQ06104 294 aa8.92□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms