RNA–Protein interactions for RNA: ENST00000640728.1

SPIN3-244, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,954 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-244ENST00000640728 ADAMTS12P58397 1594 aa33.29■■■□□ 2.92
SPIN3-244ENST00000640728 CTTNBP2Q8WZ74 1663 aa33.2■■■□□ 2.91
SPIN3-244ENST00000640728 SNAPC4Q5SXM2 1469 aa33.2■■■□□ 2.9
SPIN3-244ENST00000640728 MAGI1Q96QZ7 1491 aaPredicted RBP33.13■■■□□ 2.89
SPIN3-244ENST00000640728 APLP2Q06481 763 aa33.1■■■□□ 2.89
SPIN3-244ENST00000640728 EFCAB5A4FU69 1503 aa33.1■■■□□ 2.89
SPIN3-244ENST00000640728 P3H3Q8IVL6 736 aa33.03■■■□□ 2.88
SPIN3-244ENST00000640728 GRIN2AQ12879 1464 aa33.03■■■□□ 2.88
SPIN3-244ENST00000640728 SYNJ2O15056 1496 aa33.02■■■□□ 2.88
SPIN3-244ENST00000640728 TTBK1Q5TCY1 1321 aaPredicted RBP33.01■■■□□ 2.88
SPIN3-244ENST00000640728 FHOD3Q2V2M9 1422 aa32.99■■■□□ 2.87
SPIN3-244ENST00000640728 CHMP7Q8WUX9 453 aaPredicted RBP32.98■■■□□ 2.87
SPIN3-244ENST00000640728 SAMD9Q5K651 1589 aa32.96■■■□□ 2.87
SPIN3-244ENST00000640728 IQGAP2Q13576 1575 aa32.95■■■□□ 2.86
SPIN3-244ENST00000640728 KIAA0586Q9BVV6 1533 aa32.92■■■□□ 2.86
SPIN3-244ENST00000640728 FBLN2P98095 1184 aa32.87■■■□□ 2.85
SPIN3-244ENST00000640728 FMN1Q68DA7 1419 aa32.84■■■□□ 2.85
SPIN3-244ENST00000640728 KANK4Q5T7N3 995 aaPredicted RBP32.83■■■□□ 2.85
SPIN3-244ENST00000640728 UGGT2Q9NYU1 1516 aa32.83■■■□□ 2.85
SPIN3-244ENST00000640728 MAP3K1Q13233 1512 aa32.81■■■□□ 2.84
SPIN3-244ENST00000640728 NUP160Q12769 1436 aa32.81■■■□□ 2.84
SPIN3-244ENST00000640728 CASKIN1Q8WXD9 1431 aa32.8■■■□□ 2.84
SPIN3-244ENST00000640728 CEP170Q5SW79 1584 aa32.79■■■□□ 2.84
SPIN3-244ENST00000640728 PCF11O94913 1555 aaKnown RBP32.78■■■□□ 2.84
SPIN3-244ENST00000640728 FYCO1Q9BQS8 1478 aa32.77■■■□□ 2.84
SPIN3-244ENST00000640728 TIAM1Q13009 1591 aa32.72■■■□□ 2.83
SPIN3-244ENST00000640728 ATP1B4Q9UN42 357 aaPredicted RBP32.68■■■□□ 2.82
SPIN3-244ENST00000640728 DISP1Q96F81 1524 aa32.67■■■□□ 2.82
SPIN3-244ENST00000640728 JPH4Q96JJ6 628 aa32.61■■■□□ 2.81
SPIN3-244ENST00000640728 LRRC9Q6ZRR7 1453 aa32.61■■■□□ 2.81
SPIN3-244ENST00000640728 KIAA0556O60303 1618 aa32.61■■■□□ 2.81
SPIN3-244ENST00000640728 CFAP43Q8NDM7 1665 aa32.59■■■□□ 2.81
SPIN3-244ENST00000640728 HRCP23327 699 aa32.56■■■□□ 2.8
SPIN3-244ENST00000640728 CHD1O14646 1710 aa32.52■■■□□ 2.8
SPIN3-244ENST00000640728 CARMIL2Q6F5E8 1435 aa32.49■■■□□ 2.79
SPIN3-244ENST00000640728 RRBP1Q9P2E9 1410 aaKnown RBP32.45■■■□□ 2.79
SPIN3-244ENST00000640728 HECW1Q76N89 1606 aa32.42■■■□□ 2.78
SPIN3-244ENST00000640728 LRRIQ1Q96JM4 1722 aa32.41■■■□□ 2.78
SPIN3-244ENST00000640728 CCDC18Q5T9S5 1454 aa32.41■■■□□ 2.78
SPIN3-244ENST00000640728 EPRSP07814 1512 aaKnown RBP32.37■■■□□ 2.77
SPIN3-244ENST00000640728 MTUS2Q5JR59 1369 aa32.36■■■□□ 2.77
SPIN3-244ENST00000640728 PHLDB1Q86UU1 1377 aa32.36■■■□□ 2.77
SPIN3-244ENST00000640728 PRG4Q92954 1404 aaPredicted RBP32.35■■■□□ 2.77
SPIN3-244ENST00000640728 CCNB3Q8WWL7 1395 aa32.34■■■□□ 2.77
SPIN3-244ENST00000640728 HNRNPUL2Q1KMD3 747 aaKnown RBP32.34■■■□□ 2.77
SPIN3-244ENST00000640728 RAPGEF6Q8TEU7 1601 aa32.3■■■□□ 2.76
SPIN3-244ENST00000640728 NUP153P49790 1475 aaKnown RBP32.29■■■□□ 2.76
SPIN3-244ENST00000640728 SHROOM2Q13796 1616 aa32.28■■■□□ 2.76
SPIN3-244ENST00000640728 CDK13Q14004 1512 aaKnown RBP32.25■■■□□ 2.75
SPIN3-244ENST00000640728 EHBP1L1Q8N3D4 1523 aa32.25■■■□□ 2.75
SPIN3-244ENST00000640728 PLB1Q6P1J6 1458 aa32.25■■■□□ 2.75
SPIN3-244ENST00000640728 MAGI3Q5TCQ9 1506 aa32.24■■■□□ 2.75
SPIN3-244ENST00000640728 CLASP1Q7Z460 1538 aa32.23■■■□□ 2.75
SPIN3-244ENST00000640728 ARID3CA6NKF2 412 aa32.21■■■□□ 2.75
SPIN3-244ENST00000640728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.19■■■□□ 2.74
SPIN3-244ENST00000640728 PTPRGP23470 1445 aa32.18■■■□□ 2.74
SPIN3-244ENST00000640728 NCOA2Q15596 1464 aa32.18■■■□□ 2.74
SPIN3-244ENST00000640728 ABCA8O94911 1581 aa32.16■■■□□ 2.74
SPIN3-244ENST00000640728 SUPT6HQ7KZ85 1726 aaKnown RBP32.14■■■□□ 2.74
SPIN3-244ENST00000640728 ARHGEF11O15085 1522 aa32.13■■■□□ 2.73
SPIN3-244ENST00000640728 ZEB1P37275 1124 aaPredicted RBP32.12■■■□□ 2.73
SPIN3-244ENST00000640728 CDK11AQ9UQ88 783 aaPredicted RBP32.11■■■□□ 2.73
SPIN3-244ENST00000640728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.1■■■□□ 2.73
SPIN3-244ENST00000640728 FGD6Q6ZV73 1430 aa32.09■■■□□ 2.73
SPIN3-244ENST00000640728 CCER1Q8TC90 406 aaPredicted RBP32.08■■■□□ 2.73
SPIN3-244ENST00000640728 MYOM3Q5VTT5 1437 aa32.08■■■□□ 2.73
SPIN3-244ENST00000640728 ERCC6L2Q5T890 1561 aa32.07■■■□□ 2.72
SPIN3-244ENST00000640728 FAM50AQ14320 339 aaKnown RBP32.07■■■□□ 2.72
SPIN3-244ENST00000640728 ITGAEP38570 1179 aa32.01■■■□□ 2.72
SPIN3-244ENST00000640728 ATP10BO94823 1461 aa32■■■□□ 2.71
SPIN3-244ENST00000640728 UACAQ9BZF9 1416 aa31.99■■■□□ 2.71
SPIN3-244ENST00000640728 TROQ12816 1431 aaPredicted RBP31.99■■■□□ 2.71
SPIN3-244ENST00000640728 OSCARQ8IYS5 282 aa31.95■■■□□ 2.71
SPIN3-244ENST00000640728 PLEKHD1A6NEE1 506 aa31.9■■■□□ 2.7
SPIN3-244ENST00000640728 MIA2Q96PC5 1412 aa31.9■■■□□ 2.7
SPIN3-244ENST00000640728 TCOF1Q13428 1488 aaKnown RBP31.86■■■□□ 2.69
SPIN3-244ENST00000640728 PTPN23Q9H3S7 1636 aa31.86■■■□□ 2.69
SPIN3-244ENST00000640728 ABCC2Q92887 1545 aa31.85■■■□□ 2.69
SPIN3-244ENST00000640728 ADCY10Q96PN6 1610 aa31.81■■■□□ 2.68
SPIN3-244ENST00000640728 UHRF1BP1LA0JNW5 1464 aa31.79■■■□□ 2.68
SPIN3-244ENST00000640728 SETD5Q9C0A6 1442 aa31.77■■■□□ 2.68
SPIN3-244ENST00000640728 KIF14Q15058 1648 aa31.76■■■□□ 2.68
SPIN3-244ENST00000640728 PTPRKQ15262 1439 aa31.76■■■□□ 2.68
SPIN3-244ENST00000640728 RAB3GAP2Q9H2M9 1393 aa31.74■■■□□ 2.67
SPIN3-244ENST00000640728 GPATCH8Q9UKJ3 1502 aaKnown RBP31.73■■■□□ 2.67
SPIN3-244ENST00000640728 ABCC10Q5T3U5 1492 aa31.71■■■□□ 2.67
SPIN3-244ENST00000640728 DHX57Q6P158 1386 aaKnown RBP31.7■■■□□ 2.67
SPIN3-244ENST00000640728 CFDP1Q9UEE9 299 aaPredicted RBP31.68■■■□□ 2.66
SPIN3-244ENST00000640728 KDM5BQ9UGL1 1544 aa31.67■■■□□ 2.66
SPIN3-244ENST00000640728 ZNF644Q9H582 1327 aaPredicted RBP31.64■■■□□ 2.66
SPIN3-244ENST00000640728 ITSN2Q9NZM3 1697 aa31.63■■■□□ 2.65
SPIN3-244ENST00000640728 HFM1A2PYH4 1435 aa31.62■■■□□ 2.65
SPIN3-244ENST00000640728 CLSPNQ9HAW4 1339 aa31.61■■■□□ 2.65
SPIN3-244ENST00000640728 ZCCHC11Q5TAX3 1644 aaKnown RBP31.58■■■□□ 2.65
SPIN3-244ENST00000640728 CAMSAP2Q08AD1 1489 aa31.56■■■□□ 2.64
SPIN3-244ENST00000640728 DAPK1P53355 1430 aa31.55■■■□□ 2.64
SPIN3-244ENST00000640728 NAIPQ13075 1403 aa31.55■■■□□ 2.64
SPIN3-244ENST00000640728 ABCC5O15440 1437 aa31.54■■■□□ 2.64
SPIN3-244ENST00000640728 CHIC2Q9UKJ5 165 aa31.53■■■□□ 2.64
SPIN3-244ENST00000640728 CDC42BPAQ5VT25 1732 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms