RNA–Protein interactions for RNA: ENST00000619590.1

AMD1-208, Transcript of adenosylmethionine decarboxylase 1, humanhuman

TSL 2

Gene AMD1, Length 4,329 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMD1-208ENST00000619590 CCER1Q8TC90 406 aaPredicted RBP9.52□□□□□ -0.88
AMD1-208ENST00000619590 TDRD9Q8NDG6 1382 aaKnown RBP9.51□□□□□ -0.89
AMD1-208ENST00000619590 MRC2Q9UBG0 1479 aa9.51□□□□□ -0.89
AMD1-208ENST00000619590 P3H3Q8IVL6 736 aa9.51□□□□□ -0.89
AMD1-208ENST00000619590 PRDM2Q13029 1718 aa9.5□□□□□ -0.89
AMD1-208ENST00000619590 IGF1RP08069 1367 aa9.5□□□□□ -0.89
AMD1-208ENST00000619590 CHMP7Q8WUX9 453 aaPredicted RBP9.5□□□□□ -0.89
AMD1-208ENST00000619590 ERICH3Q5RHP9 1530 aa9.49□□□□□ -0.89
AMD1-208ENST00000619590 RAD54L2Q9Y4B4 1467 aa9.49□□□□□ -0.89
AMD1-208ENST00000619590 POLA1P09884 1462 aaPredicted RBP9.48□□□□□ -0.89
AMD1-208ENST00000619590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.48□□□□□ -0.89
AMD1-208ENST00000619590 HNRNPUL2Q1KMD3 747 aaKnown RBP9.48□□□□□ -0.89
AMD1-208ENST00000619590 HRCP23327 699 aa9.48□□□□□ -0.89
AMD1-208ENST00000619590 ATF5Q9Y2D1 282 aaPredicted RBP9.47□□□□□ -0.89
AMD1-208ENST00000619590 VPS8Q8N3P4 1428 aa9.47□□□□□ -0.89
AMD1-208ENST00000619590 GAPVD1Q14C86 1478 aa9.46□□□□□ -0.89
AMD1-208ENST00000619590 PRXQ9BXM0 1461 aa9.46□□□□□ -0.9
AMD1-208ENST00000619590 ABCA10Q8WWZ4 1543 aa9.45□□□□□ -0.9
AMD1-208ENST00000619590 PLCB2Q00722 1185 aa9.45□□□□□ -0.9
AMD1-208ENST00000619590 FHAD1B1AJZ9 1412 aa9.44□□□□□ -0.9
AMD1-208ENST00000619590 URB2Q14146 1524 aaKnown RBP9.43□□□□□ -0.9
AMD1-208ENST00000619590 IFT140Q96RY7 1462 aa9.43□□□□□ -0.9
AMD1-208ENST00000619590 RNF216Q9NWF9 866 aaPredicted RBP9.43□□□□□ -0.9
AMD1-208ENST00000619590 ITGAEP38570 1179 aa9.4□□□□□ -0.9
AMD1-208ENST00000619590 CDK11AQ9UQ88 783 aaPredicted RBP9.4□□□□□ -0.9
AMD1-208ENST00000619590 GRIN2BQ13224 1484 aa9.39□□□□□ -0.91
AMD1-208ENST00000619590 FAM50AQ14320 339 aaKnown RBP9.39□□□□□ -0.91
AMD1-208ENST00000619590 FMN1Q68DA7 1419 aa9.37□□□□□ -0.91
AMD1-208ENST00000619590 CUL7Q14999 1698 aa9.37□□□□□ -0.91
AMD1-208ENST00000619590 AQRO60306 1485 aaKnown RBP eCLIP9.36□□□□□ -0.912e-8■■■■■ 36.2
AMD1-208ENST00000619590 MTUS2Q5JR59 1369 aa9.36□□□□□ -0.91
AMD1-208ENST00000619590 KIF21AQ7Z4S6 1674 aa9.34□□□□□ -0.91
AMD1-208ENST00000619590 TAOK2Q9UL54 1235 aa9.33□□□□□ -0.92
AMD1-208ENST00000619590 ATXN8OSP0DMR3 200 aa9.32□□□□□ -0.92
AMD1-208ENST00000619590 CARMIL2Q6F5E8 1435 aa9.32□□□□□ -0.92
AMD1-208ENST00000619590 ARID3CA6NKF2 412 aa9.31□□□□□ -0.92
AMD1-208ENST00000619590 KDM2AQ9Y2K7 1162 aa9.31□□□□□ -0.92
AMD1-208ENST00000619590 FHOD3Q2V2M9 1422 aa9.31□□□□□ -0.92
AMD1-208ENST00000619590 EFCAB5A4FU69 1503 aa9.31□□□□□ -0.92
AMD1-208ENST00000619590 HOXD11P31277 338 aaPredicted RBP9.3□□□□□ -0.92
AMD1-208ENST00000619590 ARHGAP35Q9NRY4 1499 aa9.3□□□□□ -0.92
AMD1-208ENST00000619590 WDR62O43379 1518 aa9.29□□□□□ -0.92
AMD1-208ENST00000619590 ARAP1Q96P48 1450 aa9.28□□□□□ -0.92
AMD1-208ENST00000619590 SNAPC4Q5SXM2 1469 aa9.27□□□□□ -0.92
AMD1-208ENST00000619590 KANK4Q5T7N3 995 aaPredicted RBP9.26□□□□□ -0.93
AMD1-208ENST00000619590 MAGI1Q96QZ7 1491 aaPredicted RBP9.26□□□□□ -0.93
AMD1-208ENST00000619590 JPH4Q96JJ6 628 aa9.25□□□□□ -0.93
AMD1-208ENST00000619590 CCNB3Q8WWL7 1395 aa9.25□□□□□ -0.93
AMD1-208ENST00000619590 WDR97A6NE52 1622 aa9.25□□□□□ -0.93
AMD1-208ENST00000619590 PLEKHD1A6NEE1 506 aa9.24□□□□□ -0.93
AMD1-208ENST00000619590 ABCA5Q8WWZ7 1642 aa9.24□□□□□ -0.93
AMD1-208ENST00000619590 ZNF608Q9ULD9 1512 aaPredicted RBP9.24□□□□□ -0.93
AMD1-208ENST00000619590 CASKIN1Q8WXD9 1431 aa9.23□□□□□ -0.93
AMD1-208ENST00000619590 SYNJ2O15056 1496 aa9.23□□□□□ -0.93
AMD1-208ENST00000619590 FYCO1Q9BQS8 1478 aa9.22□□□□□ -0.93
AMD1-208ENST00000619590 KIAA0586Q9BVV6 1533 aa9.22□□□□□ -0.93
AMD1-208ENST00000619590 IQGAP2Q13576 1575 aa9.21□□□□□ -0.94
AMD1-208ENST00000619590 TARBP1Q13395 1621 aaKnown RBP9.21□□□□□ -0.94
AMD1-208ENST00000619590 GRIN2AQ12879 1464 aa9.21□□□□□ -0.94
AMD1-208ENST00000619590 NPM1P06748 294 aaKnown RBP eCLIP9.2□□□□□ -0.94
AMD1-208ENST00000619590 ZNF777Q9ULD5 760 aaPredicted RBP9.2□□□□□ -0.94
AMD1-208ENST00000619590 CCDC18Q5T9S5 1454 aa9.2□□□□□ -0.94
AMD1-208ENST00000619590 MYCNP04198 464 aaPredicted RBP9.19□□□□□ -0.94
AMD1-208ENST00000619590 TRIM52Q96A61 297 aa9.19□□□□□ -0.94
AMD1-208ENST00000619590 ADAMTS12P58397 1594 aa9.19□□□□□ -0.94
AMD1-208ENST00000619590 PKD2Q13563 968 aa9.19□□□□□ -0.94
AMD1-208ENST00000619590 ACIN1Q9UKV3 1341 aaKnown RBP9.19□□□□□ -0.94
AMD1-208ENST00000619590 SCAF1Q9H7N4 1312 aaKnown RBP9.19□□□□□ -0.94
AMD1-208ENST00000619590 CTTNBP2Q8WZ74 1663 aa9.18□□□□□ -0.94
AMD1-208ENST00000619590 MYT1LQ9UL68 1186 aa9.18□□□□□ -0.94
AMD1-208ENST00000619590 LRRC9Q6ZRR7 1453 aa9.18□□□□□ -0.94
AMD1-208ENST00000619590 PBRM1Q86U86 1689 aa9.18□□□□□ -0.94
AMD1-208ENST00000619590 MAP3K1Q13233 1512 aa9.17□□□□□ -0.94
AMD1-208ENST00000619590 EIF4G3O43432 1585 aaKnown RBP9.17□□□□□ -0.94
AMD1-208ENST00000619590 PROM2Q8N271 834 aa9.16□□□□□ -0.94
AMD1-208ENST00000619590 TIMELESSQ9UNS1 1208 aa9.16□□□□□ -0.94
AMD1-208ENST00000619590 TIAM1Q13009 1591 aa9.16□□□□□ -0.94
AMD1-208ENST00000619590 CFDP1Q9UEE9 299 aaPredicted RBP9.16□□□□□ -0.94
AMD1-208ENST00000619590 PTPRGP23470 1445 aa9.16□□□□□ -0.94
AMD1-208ENST00000619590 THOC2Q8NI27 1593 aaKnown RBP9.14□□□□□ -0.95
AMD1-208ENST00000619590 HECW1Q76N89 1606 aa9.14□□□□□ -0.95
AMD1-208ENST00000619590 CLSPNQ9HAW4 1339 aa9.13□□□□□ -0.95
AMD1-208ENST00000619590 IFNLR1Q8IU57 520 aaPredicted RBP9.13□□□□□ -0.95
AMD1-208ENST00000619590 TSPY4P0CV99 314 aa9.13□□□□□ -0.95
AMD1-208ENST00000619590 TSPY10P0CW01 314 aa9.13□□□□□ -0.95
AMD1-208ENST00000619590 PCF11O94913 1555 aaKnown RBP9.13□□□□□ -0.95
AMD1-208ENST00000619590 CHIC2Q9UKJ5 165 aa9.12□□□□□ -0.95
AMD1-208ENST00000619590 PRG4Q92954 1404 aaPredicted RBP9.12□□□□□ -0.95
AMD1-208ENST00000619590 RRBP1Q9P2E9 1410 aaKnown RBP9.11□□□□□ -0.95
AMD1-208ENST00000619590 NEUROD1Q13562 356 aa9.11□□□□□ -0.95
AMD1-208ENST00000619590 SETD5Q9C0A6 1442 aa9.11□□□□□ -0.95
AMD1-208ENST00000619590 EHBP1L1Q8N3D4 1523 aa9.1□□□□□ -0.95
AMD1-208ENST00000619590 UGGT2Q9NYU1 1516 aa9.1□□□□□ -0.95
AMD1-208ENST00000619590 OSCARQ8IYS5 282 aa9.1□□□□□ -0.95
AMD1-208ENST00000619590 KCNH8Q96L42 1107 aa9.1□□□□□ -0.95
AMD1-208ENST00000619590 DMRT2Q9Y5R5 561 aa9.1□□□□□ -0.95
AMD1-208ENST00000619590 BCANQ96GW7 911 aa9.09□□□□□ -0.95
AMD1-208ENST00000619590 MYOM3Q5VTT5 1437 aa9.09□□□□□ -0.95
AMD1-208ENST00000619590 PHLDB1Q86UU1 1377 aa9.09□□□□□ -0.95
AMD1-208ENST00000619590 RRP7BPQ9NSQ0 103 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms