RNA–Protein interactions for RNA: ENST00000619590.1

AMD1-208, Transcript of adenosylmethionine decarboxylase 1, humanhuman

TSL 2

Gene AMD1, Length 4,329 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMD1-208ENST00000619590 CHIC1Q5VXU3 224 aa13.95□□□□□ -0.18
AMD1-208ENST00000619590 AEBP2Q6ZN18 517 aaPredicted RBP13.86□□□□□ -0.19
AMD1-208ENST00000619590 NISCHQ9Y2I1 1504 aa13.31□□□□□ -0.28
AMD1-208ENST00000619590 PHF23Q9BUL5 403 aaPredicted RBP12.74□□□□□ -0.37
AMD1-208ENST00000619590 DCAF8L2P0C7V8 631 aa11.58□□□□□ -0.56
AMD1-208ENST00000619590 CCDC180Q9P1Z9 1646 aa11.47□□□□□ -0.57
AMD1-208ENST00000619590 PLPPR3Q6T4P5 718 aa11.45□□□□□ -0.58
AMD1-208ENST00000619590 EHMT2Q96KQ7 1210 aa11.3□□□□□ -0.6
AMD1-208ENST00000619590 KCNA4P22459 653 aa11.26□□□□□ -0.61
AMD1-208ENST00000619590 SHROOM4Q9ULL8 1493 aa11.23□□□□□ -0.61
AMD1-208ENST00000619590 ADRA2BP18089 450 aa11.23□□□□□ -0.61
AMD1-208ENST00000619590 ZCCHC6Q5VYS8 1495 aaKnown RBP11.14□□□□□ -0.63
AMD1-208ENST00000619590 CSRNP3Q8WYN3 585 aa11.08□□□□□ -0.64
AMD1-208ENST00000619590 ABCC9O60706 1549 aa11.05□□□□□ -0.64
AMD1-208ENST00000619590 SUPT5HO00267 1087 aaKnown RBP10.99□□□□□ -0.65
AMD1-208ENST00000619590 SENP3Q9H4L4 574 aaPredicted RBP10.99□□□□□ -0.65
AMD1-208ENST00000619590 PPP6R1Q9UPN7 881 aa10.98□□□□□ -0.65
AMD1-208ENST00000619590 DCAF1Q9Y4B6 1507 aa10.93□□□□□ -0.66
AMD1-208ENST00000619590 NACADO15069 1562 aa10.81□□□□□ -0.68
AMD1-208ENST00000619590 MYO15BQ96JP2 1530 aa10.77□□□□□ -0.69
AMD1-208ENST00000619590 RB1CC1Q8TDY2 1594 aa10.75□□□□□ -0.69
AMD1-208ENST00000619590 SCRIBQ14160 1630 aa10.71□□□□□ -0.69
AMD1-208ENST00000619590 ZBTB22O15209 634 aa10.69□□□□□ -0.7
AMD1-208ENST00000619590 SLC24A1O60721 1099 aa10.65□□□□□ -0.71
AMD1-208ENST00000619590 PABPN1Q86U42 306 aaKnown RBP eCLIP10.54□□□□□ -0.72
AMD1-208ENST00000619590 SLC4A1APQ9BWU0 796 aaKnown RBP10.53□□□□□ -0.72
AMD1-208ENST00000619590 RTN4Q9NQC3 1192 aaKnown RBP10.53□□□□□ -0.72
AMD1-208ENST00000619590 FOXD1Q16676 465 aa10.49□□□□□ -0.73
AMD1-208ENST00000619590 RSF1Q96T23 1441 aaPredicted RBP10.39□□□□□ -0.75
AMD1-208ENST00000619590 BAZ1AQ9NRL2 1556 aaPredicted RBP10.35□□□□□ -0.75
AMD1-208ENST00000619590 TRIM41Q8WV44 630 aa10.35□□□□□ -0.75
AMD1-208ENST00000619590 PPP4R3CPQ6ZMV5 832 aa10.32□□□□□ -0.76
AMD1-208ENST00000619590 NPM3O75607 178 aaKnown RBP10.32□□□□□ -0.76
AMD1-208ENST00000619590 CECR2Q9BXF3 1484 aa10.31□□□□□ -0.76
AMD1-208ENST00000619590 MROH2BQ7Z745 1585 aa10.25□□□□□ -0.77
AMD1-208ENST00000619590 FAM9AQ8IZU1 332 aaPredicted RBP10.19□□□□□ -0.78
AMD1-208ENST00000619590 SMARCA4P51532 1647 aa10.18□□□□□ -0.78
AMD1-208ENST00000619590 BAZ1BQ9UIG0 1483 aaKnown RBP10.15□□□□□ -0.78
AMD1-208ENST00000619590 SMARCA2P51531 1590 aa10.14□□□□□ -0.79
AMD1-208ENST00000619590 WIZO95785 1651 aa10.14□□□□□ -0.79
AMD1-208ENST00000619590 BICRAQ9NZM4 1560 aa10.12□□□□□ -0.79
AMD1-208ENST00000619590 TOP2AP11388 1531 aaKnown RBP10.12□□□□□ -0.79
AMD1-208ENST00000619590 UNC13AQ9UPW8 1703 aa10.12□□□□□ -0.79
AMD1-208ENST00000619590 ATAD2BQ9ULI0 1458 aa10.06□□□□□ -0.8
AMD1-208ENST00000619590 AMER1Q5JTC6 1135 aaPredicted RBP10.05□□□□□ -0.8
AMD1-208ENST00000619590 CCDC88BA6NC98 1476 aa10.04□□□□□ -0.8
AMD1-208ENST00000619590 EIF4G1Q04637 1599 aaKnown RBP9.99□□□□□ -0.81
AMD1-208ENST00000619590 LOC105371045A0A1W2PR82 267 aa9.99□□□□□ -0.81
AMD1-208ENST00000619590 UBTFP17480 764 aaKnown RBP9.99□□□□□ -0.81
AMD1-208ENST00000619590 NCAPD3P42695 1498 aa9.96□□□□□ -0.81
AMD1-208ENST00000619590 PEG3Q9GZU2 1588 aa9.93□□□□□ -0.82
AMD1-208ENST00000619590 DNAJC5BQ9UF47 199 aa9.93□□□□□ -0.82
AMD1-208ENST00000619590 WRNQ14191 1432 aaPredicted RBP eCLIP9.93□□□□□ -0.82
AMD1-208ENST00000619590 APLP2Q06481 763 aa9.92□□□□□ -0.82
AMD1-208ENST00000619590 HMGXB3Q12766 1538 aa9.91□□□□□ -0.82
AMD1-208ENST00000619590 EEA1Q15075 1411 aa9.89□□□□□ -0.83
AMD1-208ENST00000619590 NCBP3Q53F19 620 aaKnown RBP9.85□□□□□ -0.83
AMD1-208ENST00000619590 CC2D2AQ9P2K1 1620 aa9.83□□□□□ -0.84
AMD1-208ENST00000619590 CADPSQ9ULU8 1353 aa9.83□□□□□ -0.84
AMD1-208ENST00000619590 ABCC8Q09428 1581 aa9.83□□□□□ -0.84
AMD1-208ENST00000619590 RANGAP1P46060 587 aaPredicted RBP9.82□□□□□ -0.84
AMD1-208ENST00000619590 FOXD4L1Q9NU39 408 aa9.82□□□□□ -0.84
AMD1-208ENST00000619590 PIAS4Q8N2W9 510 aaPredicted RBP9.8□□□□□ -0.84
AMD1-208ENST00000619590 PCGF6Q9BYE7 350 aa9.8□□□□□ -0.84
AMD1-208ENST00000619590 PDS5BQ9NTI5 1447 aa9.76□□□□□ -0.85
AMD1-208ENST00000619590 TRIM26Q12899 539 aaPredicted RBP9.75□□□□□ -0.85
AMD1-208ENST00000619590 CFTRP13569 1480 aa9.75□□□□□ -0.85
AMD1-208ENST00000619590 KIF27Q86VH2 1401 aa9.75□□□□□ -0.85
AMD1-208ENST00000619590 CNKSR2Q8WXI2 1034 aa9.74□□□□□ -0.85
AMD1-208ENST00000619590 GOLGA3Q08378 1498 aa9.74□□□□□ -0.85
AMD1-208ENST00000619590 SOGA1O94964 1423 aa9.73□□□□□ -0.85
AMD1-208ENST00000619590 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
AMD1-208ENST00000619590 SLC4A2P04920 1241 aa9.72□□□□□ -0.85
AMD1-208ENST00000619590 TTBK1Q5TCY1 1321 aaPredicted RBP9.7□□□□□ -0.86
AMD1-208ENST00000619590 FANCD2Q9BXW9 1451 aa9.7□□□□□ -0.86
AMD1-208ENST00000619590 TNIKQ9UKE5 1360 aa9.69□□□□□ -0.86
AMD1-208ENST00000619590 ATP1B4Q9UN42 357 aaPredicted RBP9.67□□□□□ -0.86
AMD1-208ENST00000619590 CUX2O14529 1486 aa9.66□□□□□ -0.86
AMD1-208ENST00000619590 MAPK8IP2Q13387 824 aaPredicted RBP9.65□□□□□ -0.86
AMD1-208ENST00000619590 ERCC6Q03468 1493 aa9.65□□□□□ -0.86
AMD1-208ENST00000619590 PPARGC1BQ86YN6 1023 aaKnown RBP9.65□□□□□ -0.86
AMD1-208ENST00000619590 SYNJ1O43426 1573 aa9.64□□□□□ -0.87
AMD1-208ENST00000619590 CEP162Q5TB80 1403 aa9.64□□□□□ -0.87
AMD1-208ENST00000619590 TOP2BQ02880 1626 aa9.63□□□□□ -0.87
AMD1-208ENST00000619590 PRKCSHP14314 528 aaPredicted RBP9.63□□□□□ -0.87
AMD1-208ENST00000619590 FKBP8Q14318 412 aa9.63□□□□□ -0.87
AMD1-208ENST00000619590 CLIP1P30622 1438 aa9.62□□□□□ -0.87
AMD1-208ENST00000619590 LAMC3Q9Y6N6 1575 aa9.62□□□□□ -0.87
AMD1-208ENST00000619590 ZEB1P37275 1124 aaPredicted RBP9.6□□□□□ -0.87
AMD1-208ENST00000619590 RUSC2Q8N2Y8 1516 aa9.59□□□□□ -0.87
AMD1-208ENST00000619590 CARMIL1Q5VZK9 1371 aa9.59□□□□□ -0.87
AMD1-208ENST00000619590 FGD5Q6ZNL6 1462 aa9.59□□□□□ -0.87
AMD1-208ENST00000619590 CUX1P39880 1505 aa9.58□□□□□ -0.88
AMD1-208ENST00000619590 NESP48681 1621 aa9.58□□□□□ -0.88
AMD1-208ENST00000619590 BIVM-ERCC5R4GMW8 1640 aa9.55□□□□□ -0.88
AMD1-208ENST00000619590 DNMBPQ6XZF7 1577 aa9.55□□□□□ -0.88
AMD1-208ENST00000619590 FBLN2P98095 1184 aa9.54□□□□□ -0.88
AMD1-208ENST00000619590 TOPBP1Q92547 1522 aa9.53□□□□□ -0.88
AMD1-208ENST00000619590 RAPGEF2Q9Y4G8 1499 aa9.53□□□□□ -0.88
AMD1-208ENST00000619590 KIF21BO75037 1637 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms