RNA–Protein interactions for RNA: ENST00000617493.1

COG3-206, Transcript of component of oligomeric golgi complex 3, humanhuman

TSL 1 (best) BASIC

Gene COG3, Length 1,809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-206ENST00000617493 GRIN2BQ13224 1484 aa22.66■■□□□ 1.22
COG3-206ENST00000617493 FHAD1B1AJZ9 1412 aa22.61■■□□□ 1.21
COG3-206ENST00000617493 EFCAB5A4FU69 1503 aa22.55■■□□□ 1.2
COG3-206ENST00000617493 SNAPC4Q5SXM2 1469 aa22.55■■□□□ 1.2
COG3-206ENST00000617493 SAMD9Q5K651 1589 aa22.52■■□□□ 1.2
COG3-206ENST00000617493 TTBK1Q5TCY1 1321 aaPredicted RBP22.49■■□□□ 1.19
COG3-206ENST00000617493 MAGI1Q96QZ7 1491 aaPredicted RBP22.48■■□□□ 1.19
COG3-206ENST00000617493 IQGAP2Q13576 1575 aa22.46■■□□□ 1.19
COG3-206ENST00000617493 PCF11O94913 1555 aaKnown RBP22.45■■□□□ 1.18
COG3-206ENST00000617493 FHOD3Q2V2M9 1422 aa22.45■■□□□ 1.18
COG3-206ENST00000617493 GRIN2AQ12879 1464 aa22.43■■□□□ 1.18
COG3-206ENST00000617493 CFAP43Q8NDM7 1665 aa22.39■■□□□ 1.18
COG3-206ENST00000617493 SYNJ2O15056 1496 aa22.39■■□□□ 1.18
COG3-206ENST00000617493 APLP2Q06481 763 aa22.38■■□□□ 1.17
COG3-206ENST00000617493 P3H3Q8IVL6 736 aa22.38■■□□□ 1.17
COG3-206ENST00000617493 TIAM1Q13009 1591 aa22.37■■□□□ 1.17
COG3-206ENST00000617493 CEP170Q5SW79 1584 aa22.36■■□□□ 1.17
COG3-206ENST00000617493 LRRIQ1Q96JM4 1722 aa22.35■■□□□ 1.17
COG3-206ENST00000617493 MAP3K1Q13233 1512 aa22.34■■□□□ 1.17
COG3-206ENST00000617493 UGGT2Q9NYU1 1516 aa22.33■■□□□ 1.17
COG3-206ENST00000617493 FYCO1Q9BQS8 1478 aa22.33■■□□□ 1.16
COG3-206ENST00000617493 KIAA0586Q9BVV6 1533 aa22.32■■□□□ 1.16
COG3-206ENST00000617493 KANK4Q5T7N3 995 aaPredicted RBP22.31■■□□□ 1.16
COG3-206ENST00000617493 FMN1Q68DA7 1419 aa22.29■■□□□ 1.16
COG3-206ENST00000617493 CASKIN1Q8WXD9 1431 aa22.29■■□□□ 1.16
COG3-206ENST00000617493 CHD1O14646 1710 aa22.28■■□□□ 1.16
COG3-206ENST00000617493 HRCP23327 699 aa22.27■■□□□ 1.16
COG3-206ENST00000617493 NUP160Q12769 1436 aa22.26■■□□□ 1.15
COG3-206ENST00000617493 KIAA0556O60303 1618 aa22.26■■□□□ 1.15
COG3-206ENST00000617493 DISP1Q96F81 1524 aa22.23■■□□□ 1.15
COG3-206ENST00000617493 CHMP7Q8WUX9 453 aaPredicted RBP22.23■■□□□ 1.15
COG3-206ENST00000617493 LRRC9Q6ZRR7 1453 aa22.21■■□□□ 1.15
COG3-206ENST00000617493 FBLN2P98095 1184 aa22.17■■□□□ 1.14
COG3-206ENST00000617493 HECW1Q76N89 1606 aa22.14■■□□□ 1.13
COG3-206ENST00000617493 RRBP1Q9P2E9 1410 aaKnown RBP22.12■■□□□ 1.13
COG3-206ENST00000617493 ATP1B4Q9UN42 357 aaPredicted RBP22.1■■□□□ 1.13
COG3-206ENST00000617493 RAPGEF6Q8TEU7 1601 aa22.05■■□□□ 1.12
COG3-206ENST00000617493 CCDC18Q5T9S5 1454 aa22.04■■□□□ 1.12
COG3-206ENST00000617493 MAGI3Q5TCQ9 1506 aa22.03■■□□□ 1.12
COG3-206ENST00000617493 PHLDB1Q86UU1 1377 aa22.03■■□□□ 1.12
COG3-206ENST00000617493 EPRSP07814 1512 aaKnown RBP22.02■■□□□ 1.12
COG3-206ENST00000617493 SHROOM2Q13796 1616 aa22.02■■□□□ 1.12
COG3-206ENST00000617493 CDK13Q14004 1512 aaKnown RBP22.01■■□□□ 1.11
COG3-206ENST00000617493 EHBP1L1Q8N3D4 1523 aa22.01■■□□□ 1.11
COG3-206ENST00000617493 JPH4Q96JJ6 628 aa22.01■■□□□ 1.11
COG3-206ENST00000617493 SUPT6HQ7KZ85 1726 aaKnown RBP22■■□□□ 1.11
COG3-206ENST00000617493 CCNB3Q8WWL7 1395 aa21.99■■□□□ 1.11
COG3-206ENST00000617493 HNRNPUL2Q1KMD3 747 aaKnown RBP21.98■■□□□ 1.11
COG3-206ENST00000617493 CARMIL2Q6F5E8 1435 aa21.98■■□□□ 1.11
COG3-206ENST00000617493 NUP153P49790 1475 aaKnown RBP21.97■■□□□ 1.11
COG3-206ENST00000617493 MTUS2Q5JR59 1369 aa21.95■■□□□ 1.11
COG3-206ENST00000617493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.95■■□□□ 1.1
COG3-206ENST00000617493 PLB1Q6P1J6 1458 aa21.93■■□□□ 1.1
COG3-206ENST00000617493 ARHGEF11O15085 1522 aa21.93■■□□□ 1.1
COG3-206ENST00000617493 CLASP1Q7Z460 1538 aa21.93■■□□□ 1.1
COG3-206ENST00000617493 NCOA2Q15596 1464 aa21.92■■□□□ 1.1
COG3-206ENST00000617493 ABCA8O94911 1581 aa21.9■■□□□ 1.1
COG3-206ENST00000617493 PRG4Q92954 1404 aaPredicted RBP21.9■■□□□ 1.1
COG3-206ENST00000617493 ERCC6L2Q5T890 1561 aa21.86■■□□□ 1.09
COG3-206ENST00000617493 FGD6Q6ZV73 1430 aa21.85■■□□□ 1.09
COG3-206ENST00000617493 ARID3CA6NKF2 412 aa21.83■■□□□ 1.09
COG3-206ENST00000617493 ZEB1P37275 1124 aaPredicted RBP21.82■■□□□ 1.08
COG3-206ENST00000617493 CCER1Q8TC90 406 aaPredicted RBP21.82■■□□□ 1.08
COG3-206ENST00000617493 MYOM3Q5VTT5 1437 aa21.82■■□□□ 1.08
COG3-206ENST00000617493 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.79■■□□□ 1.08
COG3-206ENST00000617493 PTPN23Q9H3S7 1636 aa21.78■■□□□ 1.08
COG3-206ENST00000617493 ADCY10Q96PN6 1610 aa21.78■■□□□ 1.08
COG3-206ENST00000617493 PTPRGP23470 1445 aa21.75■■□□□ 1.07
COG3-206ENST00000617493 FAM50AQ14320 339 aaKnown RBP21.74■■□□□ 1.07
COG3-206ENST00000617493 KIF14Q15058 1648 aa21.74■■□□□ 1.07
COG3-206ENST00000617493 ITGAEP38570 1179 aa21.73■■□□□ 1.07
COG3-206ENST00000617493 TROQ12816 1431 aaPredicted RBP21.72■■□□□ 1.07
COG3-206ENST00000617493 ATP10BO94823 1461 aa21.71■■□□□ 1.07
COG3-206ENST00000617493 TCOF1Q13428 1488 aaKnown RBP21.7■■□□□ 1.07
COG3-206ENST00000617493 ITSN2Q9NZM3 1697 aa21.68■■□□□ 1.06
COG3-206ENST00000617493 UACAQ9BZF9 1416 aa21.66■■□□□ 1.06
COG3-206ENST00000617493 CDC42BPAQ5VT25 1732 aa21.65■■□□□ 1.06
COG3-206ENST00000617493 CDK11AQ9UQ88 783 aaPredicted RBP21.65■■□□□ 1.06
COG3-206ENST00000617493 PTPRKQ15262 1439 aa21.65■■□□□ 1.06
COG3-206ENST00000617493 MIA2Q96PC5 1412 aa21.65■■□□□ 1.06
COG3-206ENST00000617493 ABCC2Q92887 1545 aa21.65■■□□□ 1.06
COG3-206ENST00000617493 DHX57Q6P158 1386 aaKnown RBP21.62■■□□□ 1.05
COG3-206ENST00000617493 RAB3GAP2Q9H2M9 1393 aa21.62■■□□□ 1.05
COG3-206ENST00000617493 SETD5Q9C0A6 1442 aa21.6■■□□□ 1.05
COG3-206ENST00000617493 ABCC10Q5T3U5 1492 aa21.57■■□□□ 1.04
COG3-206ENST00000617493 ZCCHC11Q5TAX3 1644 aaKnown RBP21.57■■□□□ 1.04
COG3-206ENST00000617493 DNMT1P26358 1616 aaKnown RBP21.56■■□□□ 1.04
COG3-206ENST00000617493 GCC2Q8IWJ2 1684 aa21.56■■□□□ 1.04
COG3-206ENST00000617493 GPATCH8Q9UKJ3 1502 aaKnown RBP21.55■■□□□ 1.04
COG3-206ENST00000617493 UHRF1BP1LA0JNW5 1464 aa21.54■■□□□ 1.04
COG3-206ENST00000617493 HFM1A2PYH4 1435 aa21.52■■□□□ 1.04
COG3-206ENST00000617493 PLEKHD1A6NEE1 506 aa21.52■■□□□ 1.04
COG3-206ENST00000617493 CDC42BPBQ9Y5S2 1711 aa21.51■■□□□ 1.03
COG3-206ENST00000617493 CROCC2H7BZ55 1655 aa21.51■■□□□ 1.03
COG3-206ENST00000617493 CAMSAP2Q08AD1 1489 aa21.5■■□□□ 1.03
COG3-206ENST00000617493 KDM5BQ9UGL1 1544 aa21.49■■□□□ 1.03
COG3-206ENST00000617493 PREX2Q70Z35 1606 aa21.49■■□□□ 1.03
COG3-206ENST00000617493 NAIPQ13075 1403 aa21.48■■□□□ 1.03
COG3-206ENST00000617493 MAPKBP1O60336 1514 aa21.48■■□□□ 1.03
COG3-206ENST00000617493 TTC37Q6PGP7 1564 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms