RNA–Protein interactions for RNA: ENST00000617493.1

COG3-206, Transcript of component of oligomeric golgi complex 3, humanhuman

TSL 1 (best) BASIC

Gene COG3, Length 1,809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-206ENST00000617493 NISCHQ9Y2I1 1504 aa32.74■■■□□ 2.83
COG3-206ENST00000617493 CCDC180Q9P1Z9 1646 aa28.57■■■□□ 2.16
COG3-206ENST00000617493 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
COG3-206ENST00000617493 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
COG3-206ENST00000617493 DCAF8L2P0C7V8 631 aa26.86■■□□□ 1.89
COG3-206ENST00000617493 ABCC9O60706 1549 aa26.83■■□□□ 1.89
COG3-206ENST00000617493 SHROOM4Q9ULL8 1493 aa26.79■■□□□ 1.88
COG3-206ENST00000617493 MYO15BQ96JP2 1530 aa26.66■■□□□ 1.86
COG3-206ENST00000617493 NACADO15069 1562 aa26.49■■□□□ 1.83
COG3-206ENST00000617493 SCRIBQ14160 1630 aa26.29■■□□□ 1.8
COG3-206ENST00000617493 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
COG3-206ENST00000617493 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
COG3-206ENST00000617493 SUPT5HO00267 1087 aaKnown RBP25.77■■□□□ 1.72
COG3-206ENST00000617493 BICRAQ9NZM4 1560 aa25.55■■□□□ 1.68
COG3-206ENST00000617493 CECR2Q9BXF3 1484 aa25.47■■□□□ 1.67
COG3-206ENST00000617493 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
COG3-206ENST00000617493 MROH2BQ7Z745 1585 aa25.34■■□□□ 1.65
COG3-206ENST00000617493 PABPN1Q86U42 306 aaKnown RBP eCLIP25.27■■□□□ 1.64
COG3-206ENST00000617493 BAZ1AQ9NRL2 1556 aaPredicted RBP25.26■■□□□ 1.63
COG3-206ENST00000617493 SMARCA4P51532 1647 aa25.2■■□□□ 1.63
COG3-206ENST00000617493 WIZO95785 1651 aa25.2■■□□□ 1.62
COG3-206ENST00000617493 PEG3Q9GZU2 1588 aa24.87■■□□□ 1.57
COG3-206ENST00000617493 TOP2AP11388 1531 aaKnown RBP24.87■■□□□ 1.57
COG3-206ENST00000617493 CHIC1Q5VXU3 224 aa24.75■■□□□ 1.55
COG3-206ENST00000617493 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
COG3-206ENST00000617493 ATAD2BQ9ULI0 1458 aa24.68■■□□□ 1.54
COG3-206ENST00000617493 SMARCA2P51531 1590 aa24.68■■□□□ 1.54
COG3-206ENST00000617493 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.53
COG3-206ENST00000617493 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
COG3-206ENST00000617493 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
COG3-206ENST00000617493 NCAPD3P42695 1498 aa24.42■■□□□ 1.5
COG3-206ENST00000617493 CC2D2AQ9P2K1 1620 aa24.34■■□□□ 1.49
COG3-206ENST00000617493 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
COG3-206ENST00000617493 TRIM41Q8WV44 630 aa24.16■■□□□ 1.46
COG3-206ENST00000617493 PRDM2Q13029 1718 aa24.03■■□□□ 1.44
COG3-206ENST00000617493 CFTRP13569 1480 aa23.94■■□□□ 1.42
COG3-206ENST00000617493 SYNJ1O43426 1573 aa23.93■■□□□ 1.42
COG3-206ENST00000617493 WRNQ14191 1432 aaPredicted RBP eCLIP23.91■■□□□ 1.42
COG3-206ENST00000617493 LOC105371045A0A1W2PR82 267 aa23.82■■□□□ 1.4
COG3-206ENST00000617493 BIVM-ERCC5R4GMW8 1640 aa23.8■■□□□ 1.4
COG3-206ENST00000617493 TOP2BQ02880 1626 aa23.79■■□□□ 1.4
COG3-206ENST00000617493 FAM9AQ8IZU1 332 aaPredicted RBP23.78■■□□□ 1.4
COG3-206ENST00000617493 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
COG3-206ENST00000617493 CUX1P39880 1505 aa23.69■■□□□ 1.38
COG3-206ENST00000617493 SOGA1O94964 1423 aa23.68■■□□□ 1.38
COG3-206ENST00000617493 DNAJC5BQ9UF47 199 aa23.67■■□□□ 1.38
COG3-206ENST00000617493 NESP48681 1621 aa23.65■■□□□ 1.38
COG3-206ENST00000617493 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.38
COG3-206ENST00000617493 LAMC3Q9Y6N6 1575 aa23.62■■□□□ 1.37
COG3-206ENST00000617493 EEA1Q15075 1411 aa23.58■■□□□ 1.37
COG3-206ENST00000617493 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
COG3-206ENST00000617493 EHMT2Q96KQ7 1210 aa23.47■■□□□ 1.35
COG3-206ENST00000617493 KIF21AQ7Z4S6 1674 aa23.46■■□□□ 1.35
COG3-206ENST00000617493 CSRNP3Q8WYN3 585 aa23.42■■□□□ 1.34
COG3-206ENST00000617493 DNMBPQ6XZF7 1577 aa23.41■■□□□ 1.34
COG3-206ENST00000617493 CEP164Q9UPV0 1460 aa23.4■■□□□ 1.34
COG3-206ENST00000617493 KIF21BO75037 1637 aa23.4■■□□□ 1.34
COG3-206ENST00000617493 FGD5Q6ZNL6 1462 aa23.38■■□□□ 1.33
COG3-206ENST00000617493 TOPBP1Q92547 1522 aa23.35■■□□□ 1.33
COG3-206ENST00000617493 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.33
COG3-206ENST00000617493 URB2Q14146 1524 aaKnown RBP23.32■■□□□ 1.32
COG3-206ENST00000617493 GOLGA3Q08378 1498 aa23.32■■□□□ 1.32
COG3-206ENST00000617493 POLA1P09884 1462 aaPredicted RBP23.26■■□□□ 1.31
COG3-206ENST00000617493 KIF27Q86VH2 1401 aa23.25■■□□□ 1.31
COG3-206ENST00000617493 TNIKQ9UKE5 1360 aa23.23■■□□□ 1.31
COG3-206ENST00000617493 WDR97A6NE52 1622 aa23.23■■□□□ 1.31
COG3-206ENST00000617493 RAPGEF2Q9Y4G8 1499 aa23.22■■□□□ 1.31
COG3-206ENST00000617493 CUX2O14529 1486 aa23.21■■□□□ 1.31
COG3-206ENST00000617493 PRXQ9BXM0 1461 aa23.19■■□□□ 1.3
COG3-206ENST00000617493 ERICH3Q5RHP9 1530 aa23.19■■□□□ 1.3
COG3-206ENST00000617493 CEP162Q5TB80 1403 aa23.17■■□□□ 1.3
COG3-206ENST00000617493 RAD54L2Q9Y4B4 1467 aa23.17■■□□□ 1.3
COG3-206ENST00000617493 ABCA10Q8WWZ4 1543 aa23.15■■□□□ 1.3
COG3-206ENST00000617493 UBTFP17480 764 aaKnown RBP23.12■■□□□ 1.29
COG3-206ENST00000617493 MRC2Q9UBG0 1479 aa23.09■■□□□ 1.29
COG3-206ENST00000617493 TARBP1Q13395 1621 aaKnown RBP23.06■■□□□ 1.28
COG3-206ENST00000617493 IGF1RP08069 1367 aa23.06■■□□□ 1.28
COG3-206ENST00000617493 ABCA5Q8WWZ7 1642 aa23.04■■□□□ 1.28
COG3-206ENST00000617493 WDR62O43379 1518 aa23.01■■□□□ 1.27
COG3-206ENST00000617493 THOC2Q8NI27 1593 aaKnown RBP22.99■■□□□ 1.27
COG3-206ENST00000617493 CUL7Q14999 1698 aa22.97■■□□□ 1.27
COG3-206ENST00000617493 CLIP1P30622 1438 aa22.93■■□□□ 1.26
COG3-206ENST00000617493 ERCC6Q03468 1493 aa22.93■■□□□ 1.26
COG3-206ENST00000617493 CARMIL1Q5VZK9 1371 aa22.93■■□□□ 1.26
COG3-206ENST00000617493 PBRM1Q86U86 1689 aa22.91■■□□□ 1.26
COG3-206ENST00000617493 GAPVD1Q14C86 1478 aa22.88■■□□□ 1.25
COG3-206ENST00000617493 TDRD9Q8NDG6 1382 aaKnown RBP22.88■■□□□ 1.25
COG3-206ENST00000617493 CTTNBP2Q8WZ74 1663 aa22.82■■□□□ 1.24
COG3-206ENST00000617493 PCGF6Q9BYE7 350 aa22.82■■□□□ 1.24
COG3-206ENST00000617493 IFT140Q96RY7 1462 aa22.8■■□□□ 1.24
COG3-206ENST00000617493 ARAP1Q96P48 1450 aa22.77■■□□□ 1.24
COG3-206ENST00000617493 VPS8Q8N3P4 1428 aa22.77■■□□□ 1.23
COG3-206ENST00000617493 ZNF608Q9ULD9 1512 aaPredicted RBP22.76■■□□□ 1.23
COG3-206ENST00000617493 AQRO60306 1485 aaKnown RBP eCLIP22.75■■□□□ 1.232e-6■■■■□ 25.4
COG3-206ENST00000617493 RANGAP1P46060 587 aaPredicted RBP22.75■■□□□ 1.23
COG3-206ENST00000617493 TRIM26Q12899 539 aaPredicted RBP22.75■■□□□ 1.23
COG3-206ENST00000617493 EIF4G3O43432 1585 aaKnown RBP22.73■■□□□ 1.23
COG3-206ENST00000617493 ARHGAP35Q9NRY4 1499 aa22.72■■□□□ 1.23
COG3-206ENST00000617493 ADAMTS12P58397 1594 aa22.72■■□□□ 1.23
COG3-206ENST00000617493 PPARGC1BQ86YN6 1023 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms