RNA–Protein interactions for RNA: ENST00000602212.5

NPAS1-208, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-208ENST00000602212 GRIN2BQ13224 1484 aa35.31■■■■□ 3.24
NPAS1-208ENST00000602212 ADAMTS12P58397 1594 aa35.29■■■■□ 3.24
NPAS1-208ENST00000602212 APLP2Q06481 763 aa35.29■■■■□ 3.24
NPAS1-208ENST00000602212 FHAD1B1AJZ9 1412 aa35.26■■■■□ 3.24
NPAS1-208ENST00000602212 EIF4G3O43432 1585 aaKnown RBP35.24■■■■□ 3.23
NPAS1-208ENST00000602212 EFCAB5A4FU69 1503 aa35.21■■■■□ 3.23
NPAS1-208ENST00000602212 SNAPC4Q5SXM2 1469 aa35.08■■■■□ 3.21
NPAS1-208ENST00000602212 FHOD3Q2V2M9 1422 aa35.08■■■■□ 3.21
NPAS1-208ENST00000602212 P3H3Q8IVL6 736 aa35.06■■■■□ 3.2
NPAS1-208ENST00000602212 SAMD9Q5K651 1589 aa35.06■■■■□ 3.2
NPAS1-208ENST00000602212 PCF11O94913 1555 aaKnown RBP35.01■■■■□ 3.19
NPAS1-208ENST00000602212 KANK4Q5T7N3 995 aaPredicted RBP34.99■■■■□ 3.19
NPAS1-208ENST00000602212 MAGI1Q96QZ7 1491 aaPredicted RBP34.97■■■■□ 3.19
NPAS1-208ENST00000602212 IQGAP2Q13576 1575 aa34.96■■■■□ 3.19
NPAS1-208ENST00000602212 MAP3K1Q13233 1512 aa34.96■■■■□ 3.19
NPAS1-208ENST00000602212 TIAM1Q13009 1591 aa34.95■■■■□ 3.19
NPAS1-208ENST00000602212 GRIN2AQ12879 1464 aa34.92■■■■□ 3.18
NPAS1-208ENST00000602212 FYCO1Q9BQS8 1478 aa34.89■■■■□ 3.18
NPAS1-208ENST00000602212 FMN1Q68DA7 1419 aa34.88■■■■□ 3.17
NPAS1-208ENST00000602212 CASKIN1Q8WXD9 1431 aa34.87■■■■□ 3.17
NPAS1-208ENST00000602212 CFAP43Q8NDM7 1665 aa34.87■■■■□ 3.17
NPAS1-208ENST00000602212 SYNJ2O15056 1496 aa34.85■■■■□ 3.17
NPAS1-208ENST00000602212 KIAA0586Q9BVV6 1533 aa34.79■■■■□ 3.16
NPAS1-208ENST00000602212 UGGT2Q9NYU1 1516 aa34.78■■■■□ 3.16
NPAS1-208ENST00000602212 LRRC9Q6ZRR7 1453 aa34.77■■■■□ 3.16
NPAS1-208ENST00000602212 CHMP7Q8WUX9 453 aaPredicted RBP34.73■■■■□ 3.15
NPAS1-208ENST00000602212 ATP1B4Q9UN42 357 aaPredicted RBP34.73■■■■□ 3.15
NPAS1-208ENST00000602212 CEP170Q5SW79 1584 aa34.72■■■■□ 3.15
NPAS1-208ENST00000602212 RRBP1Q9P2E9 1410 aaKnown RBP34.67■■■■□ 3.14
NPAS1-208ENST00000602212 ZEB1P37275 1124 aaPredicted RBP34.67■■■■□ 3.14
NPAS1-208ENST00000602212 LRRIQ1Q96JM4 1722 aa34.65■■■■□ 3.14
NPAS1-208ENST00000602212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.64■■■■□ 3.14
NPAS1-208ENST00000602212 FBLN2P98095 1184 aa34.63■■■■□ 3.13
NPAS1-208ENST00000602212 HNRNPUL2Q1KMD3 747 aaKnown RBP34.63■■■■□ 3.13
NPAS1-208ENST00000602212 NUP160Q12769 1436 aa34.62■■■■□ 3.13
NPAS1-208ENST00000602212 KIAA0556O60303 1618 aa34.62■■■■□ 3.13
NPAS1-208ENST00000602212 DISP1Q96F81 1524 aa34.61■■■■□ 3.13
NPAS1-208ENST00000602212 CCNB3Q8WWL7 1395 aa34.54■■■■□ 3.12
NPAS1-208ENST00000602212 CCER1Q8TC90 406 aaPredicted RBP34.53■■■■□ 3.12
NPAS1-208ENST00000602212 HECW1Q76N89 1606 aa34.52■■■■□ 3.12
NPAS1-208ENST00000602212 PHLDB1Q86UU1 1377 aa34.5■■■■□ 3.11
NPAS1-208ENST00000602212 CCDC18Q5T9S5 1454 aa34.45■■■■□ 3.11
NPAS1-208ENST00000602212 CHD1O14646 1710 aa34.42■■■■□ 3.1
NPAS1-208ENST00000602212 MTUS2Q5JR59 1369 aa34.42■■■■□ 3.1
NPAS1-208ENST00000602212 EPRSP07814 1512 aaKnown RBP34.38■■■■□ 3.09
NPAS1-208ENST00000602212 JPH4Q96JJ6 628 aa34.37■■■■□ 3.09
NPAS1-208ENST00000602212 EHBP1L1Q8N3D4 1523 aa34.37■■■■□ 3.09
NPAS1-208ENST00000602212 MAGI3Q5TCQ9 1506 aa34.33■■■■□ 3.09
NPAS1-208ENST00000602212 CARMIL2Q6F5E8 1435 aa34.33■■■■□ 3.09
NPAS1-208ENST00000602212 RAPGEF6Q8TEU7 1601 aa34.32■■■■□ 3.08
NPAS1-208ENST00000602212 CDK13Q14004 1512 aaKnown RBP34.31■■■■□ 3.08
NPAS1-208ENST00000602212 SUPT6HQ7KZ85 1726 aaKnown RBP34.31■■■■□ 3.08
NPAS1-208ENST00000602212 NCOA2Q15596 1464 aa34.27■■■■□ 3.08
NPAS1-208ENST00000602212 NUP153P49790 1475 aaKnown RBP34.25■■■■□ 3.07
NPAS1-208ENST00000602212 ARHGEF11O15085 1522 aa34.21■■■■□ 3.07
NPAS1-208ENST00000602212 FGD6Q6ZV73 1430 aa34.21■■■■□ 3.07
NPAS1-208ENST00000602212 ITGAEP38570 1179 aa34.2■■■■□ 3.07
NPAS1-208ENST00000602212 FAM50AQ14320 339 aaKnown RBP34.18■■■■□ 3.06
NPAS1-208ENST00000602212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.18■■■■□ 3.06
NPAS1-208ENST00000602212 ARID3CA6NKF2 412 aa34.18■■■■□ 3.06
NPAS1-208ENST00000602212 PLB1Q6P1J6 1458 aa34.17■■■■□ 3.06
NPAS1-208ENST00000602212 MYOM3Q5VTT5 1437 aa34.15■■■■□ 3.06
NPAS1-208ENST00000602212 PRG4Q92954 1404 aaPredicted RBP34.13■■■■□ 3.05
NPAS1-208ENST00000602212 SHROOM2Q13796 1616 aa34.12■■■■□ 3.05
NPAS1-208ENST00000602212 ABCA8O94911 1581 aa34.07■■■■□ 3.05
NPAS1-208ENST00000602212 PTPN23Q9H3S7 1636 aa34.01■■■■□ 3.04
NPAS1-208ENST00000602212 DHX57Q6P158 1386 aaKnown RBP33.99■■■■□ 3.03
NPAS1-208ENST00000602212 CLASP1Q7Z460 1538 aa33.98■■■■□ 3.03
NPAS1-208ENST00000602212 CDK11AQ9UQ88 783 aaPredicted RBP33.97■■■■□ 3.03
NPAS1-208ENST00000602212 RAB3GAP2Q9H2M9 1393 aa33.95■■■■□ 3.03
NPAS1-208ENST00000602212 PTPRGP23470 1445 aa33.95■■■■□ 3.03
NPAS1-208ENST00000602212 SETD5Q9C0A6 1442 aa33.94■■■■□ 3.02
NPAS1-208ENST00000602212 TCOF1Q13428 1488 aaKnown RBP33.93■■■■□ 3.02
NPAS1-208ENST00000602212 TROQ12816 1431 aaPredicted RBP33.92■■■■□ 3.02
NPAS1-208ENST00000602212 ERCC6L2Q5T890 1561 aa33.9■■■■□ 3.02
NPAS1-208ENST00000602212 MIA2Q96PC5 1412 aa33.9■■■■□ 3.02
NPAS1-208ENST00000602212 PTPRKQ15262 1439 aa33.87■■■■□ 3.01
NPAS1-208ENST00000602212 ADCY10Q96PN6 1610 aa33.86■■■■□ 3.01
NPAS1-208ENST00000602212 ATP10BO94823 1461 aa33.86■■■■□ 3.01
NPAS1-208ENST00000602212 CLSPNQ9HAW4 1339 aa33.86■■■■□ 3.01
NPAS1-208ENST00000602212 KIF14Q15058 1648 aa33.81■■■■□ 3
NPAS1-208ENST00000602212 UACAQ9BZF9 1416 aa33.77■■■■□ 3
NPAS1-208ENST00000602212 HFM1A2PYH4 1435 aa33.74■■■□□ 2.99
NPAS1-208ENST00000602212 ITSN2Q9NZM3 1697 aa33.73■■■□□ 2.99
NPAS1-208ENST00000602212 PLEKHD1A6NEE1 506 aa33.71■■■□□ 2.99
NPAS1-208ENST00000602212 ABCC2Q92887 1545 aa33.68■■■□□ 2.98
NPAS1-208ENST00000602212 GPATCH8Q9UKJ3 1502 aaKnown RBP33.68■■■□□ 2.98
NPAS1-208ENST00000602212 NAIPQ13075 1403 aa33.66■■■□□ 2.98
NPAS1-208ENST00000602212 MAPKBP1O60336 1514 aa33.66■■■□□ 2.98
NPAS1-208ENST00000602212 ABCC10Q5T3U5 1492 aa33.63■■■□□ 2.97
NPAS1-208ENST00000602212 DNMT1P26358 1616 aaKnown RBP33.62■■■□□ 2.97
NPAS1-208ENST00000602212 CDC42BPAQ5VT25 1732 aa33.6■■■□□ 2.97
NPAS1-208ENST00000602212 ZNF644Q9H582 1327 aaPredicted RBP33.6■■■□□ 2.97
NPAS1-208ENST00000602212 GCC2Q8IWJ2 1684 aa33.6■■■□□ 2.97
NPAS1-208ENST00000602212 AKNAQ7Z591 1439 aa33.59■■■□□ 2.97
NPAS1-208ENST00000602212 DAPK1P53355 1430 aa33.58■■■□□ 2.97
NPAS1-208ENST00000602212 CAMSAP2Q08AD1 1489 aa33.58■■■□□ 2.97
NPAS1-208ENST00000602212 CFDP1Q9UEE9 299 aaPredicted RBP33.58■■■□□ 2.97
NPAS1-208ENST00000602212 CHIC2Q9UKJ5 165 aa33.55■■■□□ 2.96
NPAS1-208ENST00000602212 ABCC5O15440 1437 aa33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms